SRR2132685_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132685_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3518219
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	259648	7.380097714212789	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	191048	5.430247520123108	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	33188	0.9433181959394796	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10309	0.29301757508557597	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8121	0.23082701787466897	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5549	0.15772184733241448	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4603	0.1308332426150845	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3759	0.1068438320638937	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3523	0.10013589262066971	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2930	82.8655	1
GTGGAAT	91810	64.82022	6
AACGAGT	84120	64.36571	1
ACGAGTG	88790	64.02979	2
TGGAATC	93500	63.96524	7
AGTGGAA	91235	63.858658	5
GAATCAC	93735	63.734695	9
ATCGAGT	1035	63.647205	1
GGAATCA	94085	63.567524	8
CGAGTGG	91205	63.18924	3
GAGTGGA	93950	62.088272	4
AACGTGT	1475	59.65423	1
TCGAGTG	1335	58.824062	2
CGTGTGG	2070	56.981384	3
ACGTGTG	1940	53.08382	2
CGATTGG	615	44.318237	3
AGTACTT	39970	40.791397	20-21
GAGTACT	39385	40.49047	20-21
GTACTTT	39675	39.58508	22-23
TACTTTT	41585	38.75009	22-23