SRR2132684_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132684_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3716535
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	236559	6.365041631519682	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	109342	2.942041444517541	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	20291	0.5459655297205596	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9263	0.2492375290425087	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4865	0.1309014983042	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4630	0.12457840434705982	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4361	0.11734047977484405	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2495	80.53166	1
AACGAGT	67695	72.173134	1
ACGAGTG	71560	71.38214	2
GTGGAAT	75345	71.13783	6
GAATCAC	76565	70.61197	9
CGAGTGG	73405	70.508224	3
TGGAATC	76670	70.33138	7
GGAATCA	77035	70.16286	8
AGTGGAA	74795	69.93931	5
GAGTGGA	75930	68.98052	4
AACGTGT	1690	57.914318	1
CGTGTGG	2085	57.251575	3
ACGTGTG	2065	53.7356	2
ATCGAGT	1115	53.596718	1
TCGAGTG	1240	53.464756	2
GAGTACT	35695	41.519115	20-21
AGTACTT	36510	41.351757	20-21
GTACTTT	36230	40.231762	22-23
TACTTTT	38405	38.791546	22-23
CGATTGG	735	37.724583	3