SRR2132681_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132681_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2130591
Sequences flagged as poor quality	0
Sequence length	100
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	162233	7.614460025410789	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	113138	5.310169807344535	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	21412	1.0049793695739822	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6246	0.29315809557066563	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4788	0.22472637873716728	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3150	0.14784630180076794	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3102	0.1455934057733277	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	2887	0.13550230898375146	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2433	0.11419366739087887	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2249	0.10555756595235781	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	1640	82.038445	1
CGTGTGG	1190	67.136505	3
GTGGAAT	56705	64.528244	6
TGGAATC	57375	64.17606	7
GGAATCA	57930	63.642345	8
AACGAGT	52570	63.63381	1
GAATCAC	57975	63.568626	9
ACGAGTG	55005	63.49406	2
AGTGGAA	56390	63.363575	5
CGAGTGG	56210	62.847458	3
AACGTGT	1005	62.25594	1
GAGTGGA	57860	61.843094	4
ACGTGTG	1170	59.885574	2
ATCGAGT	635	55.56263	1
TCGAGTG	740	54.6498	2
ATCTGCG	800	51.70117	94
CGATTGG	355	45.009827	3
ACGATTG	320	42.615723	2
AGTACTT	24700	41.47883	20-21
GAGTACT	24460	40.934742	20-21