SRR2132670_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132670_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4502116
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	263807	5.859622453086504	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	55759	1.2385065156028854	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	54890	1.2192044807375022	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10513	0.23351241949341153	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5252	0.1166562567468275	No Hit
GTTCCCATGTACTCAGCAGTGATTCCACTCGTTCCCATGTACTCAGCAGT	5163	0.11467940852701262	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4774	0.10603902698197913	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3070	83.98124	1
ATCGAGT	1355	64.23512	1
TCGAGTG	1610	61.03726	2
GTGGAAT	114965	60.472588	6
TGGAATC	116390	59.954258	7
GAATCAC	116870	59.631622	9
AGTGGAA	114705	59.331512	5
GGAATCA	117635	59.29576	8
ACGAGTG	113230	58.554867	2
AACGAGT	108525	58.52536	1
CGAGTGG	115935	58.073795	3
AACGTGT	1940	57.961056	1
GAGTGGA	119535	56.989162	4
CGTGTGG	2545	55.022167	3
ACGTGTG	2350	54.021976	2
GAGTACT	41780	40.92936	20-21
AGTACTT	42600	40.753727	20-21
GTACTTT	41780	40.143154	22-23
TACTTTT	44830	38.051453	22-23
CATGGGG	22190	36.957317	24-25