SRR2132669_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132669_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4098334
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	246608	6.017274336352283	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	115191	2.810678680654139	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	32181	0.785221507080682	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9791	0.23890195381830762	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5521	0.13471327617514825	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	5129	0.12514841396528445	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4891	0.11934117619500997	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	4660	0.11370473953562595	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4528	0.11048391858740648	No Hit
GTTCCCATGTACTCAGCAGTGATTCCACTCGTTCCCATGTACTCAGCAGT	4224	0.1030662703430223	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2600	84.50694	1
GTGGAAT	91160	64.146255	6
AACGAGT	82965	63.91133	1
ACGAGTG	87270	63.63098	2
TGGAATC	92420	63.475117	7
GAATCAC	92915	63.24317	9
GGAATCA	93180	63.043137	8
TCGAGTG	1405	62.9166	2
CGAGTGG	90000	62.71205	3
AGTGGAA	91540	62.47844	5
ATCGAGT	1225	61.451538	1
GAGTGGA	93290	61.346725	4
CGTGTGG	1995	57.00632	3
AACGTGT	1540	54.075603	1
ACGTGTG	1995	49.966244	2
AGTACTT	38075	40.66356	20-21
CGATTGG	570	40.3991	3
GAGTACT	37400	40.310535	20-21
GTACTTT	38120	38.988697	22-23
TACTTTT	41270	37.06047	22-23