SRR2132663_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132663_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6340554
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	550876	8.688136714867502	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	26912	0.4244424067676105	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	21137	0.3333620374497244	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	11183	0.1763726008799862	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	10454	0.16487518283102706	No Hit
AACGTGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10030	0.15818807000145413	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6768	0.10674146139280573	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6351	0.10016474901089084	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGT	116700	92.97413	1
ACGAGTG	124980	90.8064	2
CGAGTGG	128990	89.29671	3
GAGTGGA	133800	87.18236	4
GTGGAAT	137230	86.86271	6
TGGAATC	138775	86.38328	7
GAATCAC	139100	86.31658	9
TACGAGT	5150	86.16575	1
GGAATCA	139455	86.08337	8
AGTGGAA	135640	85.9512	5
ATCGAGT	1935	72.71439	1
TCGAGTG	2380	67.37877	2
AACGTGT	2895	66.31958	1
CGTGTGG	3750	65.41384	3
ACGTGTG	3755	59.61323	2
CGATTGG	1105	50.182255	3
GACGAGT	1385	48.586594	1
ACGATTG	1055	48.1412	2
ATCACTG	140900	43.80427	10-11
TGAGTAC	139245	43.651978	18-19