SRR2132662_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132662_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2872725
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	198887	6.923287122853737	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	128195	4.462487707664326	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	21335	0.7426746381919606	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14946	0.520272563506775	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11010	0.3832597968827507	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7276	0.2532786813913619	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6518	0.22689258456691816	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5167	0.17986406634815374	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	3555	0.12375009790355847	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3076	0.10707603407914087	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	2760	85.91367	1
AACGAGT	63160	66.78628	1
ACGAGTG	67200	66.31576	2
GTGGAAT	68460	66.100945	6
TGGAATC	69145	65.452896	7
CGAGTGG	68540	65.373535	3
GGAATCA	69485	65.20026	8
GAATCAC	69540	65.16896	9
AGTGGAA	69715	64.486305	5
GAGTGGA	70405	63.94887	4
ATCTGCG	1070	50.07602	94
ACGTGTG	930	44.97727	2
AACGTGT	925	42.809574	1
ATCGAGT	465	42.579414	1
AGTACTT	28880	40.92117	20-21
GAGTACT	28505	40.676323	20-21
CGTGTGG	1035	40.412956	3
GTACTTT	28910	39.422318	22-23
TACTTTT	30695	38.186275	22-23
CATGGGG	12845	37.190895	24-25