SRR2132658_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132658_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3738645
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	261461	6.993469559158465	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	134180	3.5890008278400334	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	28976	0.7750401549224384	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16527	0.44205855329939053	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14075	0.3764732944689854	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7158	0.1914597400930016	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6815	0.18228529320114642	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5409	0.14467808524211312	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5144	0.13758995571925123	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3777	0.10102590644471458	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3765	87.86779	1
AACGAGT	83825	68.63229	1
ACGAGTG	89095	68.286865	2
GTGGAAT	91035	68.264145	6
TGGAATC	91945	67.58852	7
CGAGTGG	90965	67.348076	3
GAATCAC	92505	67.21491	9
GGAATCA	92545	67.16048	8
AGTGGAA	92410	66.55257	5
GAGTGGA	93475	65.81618	4
AACGTGT	1125	52.361855	1
CGTGTGG	1400	43.30621	3
AGTACTT	37615	41.639854	20-21
GAGTACT	37105	41.585175	20-21
GTACTTT	37375	40.541462	22-23
CATGGGG	19270	38.875652	24-25
ATCGAGT	655	38.851696	1
TACTTTT	40305	38.410526	22-23
ATCTGCG	1765	38.34786	94
TCGAGTG	700	38.270603	2