SRR2132652_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132652_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3732916
Sequences flagged as poor quality	0
Sequence length	100
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	301599	8.079447809701584	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	171185	4.585825129737717	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25177	0.6744593234886613	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	20715	0.554928104463106	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	16679	0.4468088754207167	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10352	0.2773167143327093	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9370	0.25101020221189013	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	7711	0.2065677341788564	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	5621	0.1505793326182534	No Hit
CGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	5333	0.14286418446062005	No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4385	0.11746848844174367	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	3775	87.80669	1
AACGAGT	79640	75.32645	1
ACGAGTG	85590	74.07538	2
GTGGAAT	89135	72.69768	6
CGAGTGG	88035	72.4976	3
TGGAATC	90135	71.84421	7
GGAATCA	90520	71.57498	8
AGTGGAA	89835	71.48251	5
GAATCAC	90845	71.339615	9
GAGTGGA	90460	71.02076	4
AACGTGT	1230	50.98422	1
CGTGTGG	1500	44.804737	3
ATCTGCG	1730	42.38195	94
AGTACTT	44580	41.025715	20-21
GAGTACT	44040	40.60032	20-21
GTACTTT	44285	39.749027	22-23
ACGTGTG	1640	39.261032	2
TACTTTT	47105	38.45691	22-23
CATGGGG	19045	38.10078	24-25
TCGAGTG	885	37.705097	2