SRR2132650_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132650_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4303607
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	292889	6.80566324945563	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	92688	2.153728256320803	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	21305	0.49504985004439295	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15846	0.36820276572651733	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8964	0.2082903945457845	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6506	0.15117551393517112	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5450	0.1266379574157213	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	5167	0.12006207815908841	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	4090	87.79543	1
AACGAGT	83625	75.324814	1
ACGAGTG	89420	74.55958	2
CGAGTGG	91290	73.50077	3
GTGGAAT	92950	73.29373	6
TGGAATC	93490	72.89552	7
GAATCAC	93970	72.518166	9
GGAATCA	94100	72.417984	8
AGTGGAA	93815	71.84147	5
GAGTGGA	93980	71.76201	4
AACGTGT	1330	47.832424	1
ATCGAGT	725	44.848854	1
AGTACTT	43365	41.997223	20-21
GAGTACT	42810	41.80613	20-21
GTACTTT	43225	40.740543	22-23
TCGAGTG	880	40.58907	2
CGTGTGG	1715	40.283886	3
ACGTGTG	1685	40.164352	2
CATGGGG	20635	38.786293	24-25
TACTTTT	47045	38.24165	22-23