SRR2132634_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132634_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5072248
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	267851	5.280715769418214	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGGAACGAGTGGTATCAACGCAG	45713	0.901237478924532	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	27939	0.5508208589169931	No Hit
TACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	22389	0.44140191883362173	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA	10162	0.20034509353643593	No Hit
AATGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10031	0.19776241224798158	No Hit
ATCGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9336	0.18406040083213596	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5767	0.11369712206500944	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGTAACGAGTGGTATCAACGCAG	5621	0.11081871391146489	No Hit
ACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	5416	0.10677711342189894	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	5960	86.616585	1
ATCGAGT	2940	79.79913	1
TCGAGTG	3480	73.348755	2
AGTGGTA	120155	60.64441	5
TGGTATC	122710	59.51016	7
GTGGTAT	122475	59.502144	6
GGTATCA	123505	59.172756	8
GTATCAA	124570	58.80267	9
GAGTGGT	125345	58.144627	4
ACGAGTG	117180	57.99985	2
CGAGTGG	121510	57.937744	3
AACGAGT	109515	56.8965	1
GACGAGT	1540	53.42718	1
ATGAGTG	5440	49.946045	2
TGAGTGG	5725	49.913597	3
AATGAGT	5625	44.13228	1
GAGTACT	47125	40.49783	20-21
AGTACTT	48405	39.99488	20-21
GTACTTT	48095	38.909317	22-23
CATGGGG	23665	37.731087	24-25