SRR2132632_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132632_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4505673
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	278628	6.183937449521969	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	58104	1.2895742766951797	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGGAACGAGTGGTATCAACGCAG	54599	1.2117834561007867	No Hit
TACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	23495	0.5214537317732556	No Hit
AATGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10636	0.23605796514749294	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA	10394	0.2306869584188644	No Hit
ATCGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9737	0.21610534097791828	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9159	0.20327706870871456	No Hit
AACGAGTGGTATCAACGCAGAGTACATGGTAACGAGTGGTATCAACGCAG	7203	0.15986513002608044	No Hit
ACGAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4933	0.10948419914183741	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	6230	89.88793	1
ATCGAGT	2595	84.43572	1
TCGAGTG	3145	76.821915	2
AGTGGTA	129550	59.253098	5
GTGGTAT	131805	58.16774	6
GGTATCA	132365	58.08076	8
TGGTATC	132475	58.007706	7
GTATCAA	132895	57.941067	9
ATGAGTG	4760	57.373566	2
GAGTGGT	135870	56.455433	4
CGAGTGG	132225	56.093872	3
ACGAGTG	128350	55.94072	2
AACGAGT	120040	54.637997	1
TGAGTGG	5425	53.62723	3
AATGAGT	4840	51.876846	1
GACGAGT	1785	50.048733	1
GAGTACT	46285	41.324505	20-21
AGTACTT	47240	41.006397	20-21
ACGATTG	780	40.97859	2
GTACTTT	46930	40.08083	22-23