SRR2132627_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132627_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9515400
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	450324	4.732580868907245	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	82110	0.8629169556718582	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	32460	0.3411312188662589	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	17446	0.1833448935409967	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	16597	0.17442251508081635	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	13590	0.14282111104104925	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	9565	0.1005212602728209	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	9205	86.92444	1
ATCGAGT	4325	73.37089	1
TCGAGTG	5050	69.43059	2
GTGGAAT	193485	62.58826	6
TGGAATC	194100	62.535213	7
GAATCAC	195795	62.250656	9
GGAATCA	195540	62.08911	8
AGTGGAA	195885	61.836346	5
ACGAGTG	188410	60.351654	2
CGAGTGG	194395	60.25011	3
AACGAGT	175825	59.62527	1
GAGTGGA	203805	59.46101	4
GACGAGT	2870	50.615402	1
ATGAGTG	9630	42.071148	2
TGAGTGG	10205	41.95323	3
GAGTACT	77355	40.891815	20-21
AGTACTT	79040	40.730576	20-21
GTACTTT	78055	39.739502	22-23
CATGGGG	36485	38.119774	24-25
AATGAGT	10185	37.018555	1