SRR2132626_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132626_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7432165
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	386752	5.20375960436831	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	85419	1.1493151726313935	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	27164	0.36549242380921304	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14212	0.19122288054692005	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	13960	0.18783221308999465	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	11868	0.1596842911856774	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8730	0.11746240832920152	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8693	0.11696457223433548	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	8280	86.3687	1
ATCGAGT	3555	80.94115	1
TCGAGTG	4525	69.59847	2
GTGGAAT	180370	59.472008	6
GAATCAC	182280	59.239525	9
TGGAATC	181695	59.171616	7
AGTGGAA	182025	58.972786	5
GGAATCA	182920	58.84985	8
CGAGTGG	182525	56.621304	3
ACGAGTG	177495	56.505505	2
GAGTGGA	190305	56.416805	4
AACGAGT	166250	55.66846	1
GACGAGT	2175	49.28708	1
ATGAGTG	8150	48.504486	2
TGAGTGG	8730	48.39965	3
AATGAGT	8230	44.103695	1
GAGTACT	65155	41.019592	20-21
AGTACTT	66605	40.952126	20-21
GTACTTT	66175	39.83695	22-23
CATGGGG	33545	38.77878	24-25