SRR2132621_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132621_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5981725
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	423514	7.080131567399037	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	100258	1.6760717017248368	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	29230	0.4886550284407926	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	22655	0.37873690281649525	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	15653	0.2616803681212359	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15455	0.2583702861632723	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	13661	0.22837893751384425	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	13187	0.22045480191750705	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7197	0.1203164638962841	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6210	0.10381620686340479	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	7525	87.60026	1
AACGAGT	113055	79.64629	1
ACGAGTG	123075	79.23478	2
ATCGAGT	3625	78.99019	1
CGAGTGG	128205	78.53295	3
GTGGAAT	133560	78.19249	6
TGGAATC	134145	78.00083	7
GAATCAC	134890	77.813896	9
GGAATCA	134670	77.77701	8
AGTGGAA	134955	77.404236	5
GAGTGGA	135230	77.25725	4
TCGAGTG	4255	73.57427	2
ATGAGTG	6685	56.041306	2
GACGAGT	2385	53.622173	1
TGAGTGG	7445	53.53379	3
AATGAGT	6935	51.187557	1
ACGATTG	1095	44.21549	2
GAGTACT	65460	42.353104	20-21
AGTACTT	66245	42.283955	20-21
GTACTTT	65740	41.50075	22-23