SRR2132620_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2132620_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4848758
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	384968	7.939517707421158	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	92037	1.8981561876257795	No Hit
TACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	27007	0.5569879956887929	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGAACGAGTGGAATCACTGCTG	21522	0.4438662436854964	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17541	0.3617627441913991	No Hit
AATGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14018	0.28910496254917234	No Hit
ATCGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	12257	0.25278638364711126	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGAGGCATTCAGGCAGCGAGA	8718	0.17979862059521223	No Hit
AACGAGTGGAATCACTGCTGAGTACATGGGGGTTAAGCGACTAAGCGTAC	7169	0.1478522953713095	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6240	0.1286927497722097	No Hit
ACGAGTGGAATCACTGCTGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6007	0.12388739549385637	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGAGT	6825	89.90074	1
AACGAGT	104030	79.72968	1
ACGAGTG	113100	79.38056	2
CGAGTGG	117280	78.78522	3
GTGGAAT	121755	78.40209	6
ATCGAGT	2940	78.04191	1
GAATCAC	122880	78.03534	9
TGGAATC	123535	77.42457	7
AGTGGAA	123280	77.410965	5
GAGTGGA	123665	77.234566	4
GGAATCA	123865	77.19095	8
TCGAGTG	3465	75.153625	2
GACGAGT	1655	65.62501	1
ATGAGTG	5545	55.863384	2
TGAGTGG	5980	55.722454	3
AATGAGT	5500	51.37682	1
ACGATTG	840	45.88576	2
AGTACTT	62370	42.733803	20-21
GAGTACT	61765	42.566525	20-21
GTACTTT	62385	41.540844	22-23