SRR2099292_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099292_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	712972
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGTCATGCGAGGTGTCGGTTGCCTCAACTGACAGGTAAGG	5749	0.8063430260935913	No Hit
GTACGTCACCGCAGACGAGCTCGCCCTGCGGCAGCAGCCCGGC	1764	0.24741504575214734	No Hit
GTGCGTCGGGCGGGTTCACCGCTCGTCAAGGGCCGGCACGAGG	1187	0.1664862014216547	No Hit
GTACGTCATGATGCTGTGTGTCCCCTCACTCAGGGCCACGCAG	1091	0.15302143702698004	No Hit
GTACGTCAGCTGTCAGTCCGACGATCTCCCTGTACGTCATTTT	1018	0.14278260576852947	No Hit
GTACGTCATGAATCAGTCCGACGATCAACGCGTACGTCATTTT	923	0.12945809933629931	No Hit
GTACGTCATTACAGACTAGCTCTCCTCGGTATCCAGACTGGCT	806	0.11304791773028955	No Hit
GTACGTCGTATCGGTTGCCGATATTGCGCCAATTCCGGCAATT	752	0.10547398775828504	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGCGC	35	5.5911187E-7	37.03048	8
TAAACGG	25	1.227193E-4	37.03048	9
ATGCGAC	35	5.5911187E-7	37.03048	8
GACGATT	20	0.001834035	37.03048	9
TATACGG	20	0.001834035	37.03048	9
AGTCGCA	40	3.8022336E-8	37.03048	8
CACGATA	25	1.2277004E-4	37.02788	7
GCGAGTT	35	5.6436147E-7	36.98632	12
CGTCACT	3795	0.0	36.881523	4
TCATGCG	1010	0.0	36.844574	6
ACGTCAC	18835	0.0	36.75265	3
GTCAACG	1230	0.0	36.72942	5
CGTCACG	4615	0.0	36.706944	4
CGTCATA	3295	0.0	36.690754	4
ACGTCAA	16095	0.0	36.659786	3
CGTCAGC	5215	0.0	36.637363	4
CGTCAAC	4800	0.0	36.6036	4
CGTCACA	4900	0.0	36.574474	4
CGTCATG	4100	0.0	36.486008	4
CGTCATC	4150	0.0	36.447926	4