SRR2099291_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099291_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	145935
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGTCATGCGAGGTGTCGGTTGCCTCAACTGACAGGTAAGG	2126	1.4568129646760544	No Hit
GTACGTCACCGCAGACGAGCTCGCCCTGCGGCAGCAGCCCGGC	584	0.4001781615102614	No Hit
GTGCGTCGGGCGGGTTCACCGCTCGTCAAGGGCCGGCACGAGG	538	0.36865727892554906	No Hit
GTACGTCATGATGCTGTGTGTCCCCTCACTCAGGGCCACGCAG	371	0.25422277041148456	No Hit
GTGCGTCGGGCGGGGTTCACCGCTCGTCAAGGGCCGGCACGAG	292	0.2000890807551307	No Hit
GTACGTCAGCTGTCAGTCCGACGATCTCCCTGTACGTCATTTT	256	0.17542056394970362	No Hit
GTACGTCGTATCGGTTGCCGATATTGCGCCAATTCCGGCAATT	249	0.17062390790420393	No Hit
GTACGTCGCTGCTGGCGAAGCCAGAGGAAACTCTGGTGGAGGT	215	0.14732586425463393	No Hit
GTACGTCAGTCGTTGAAAGGACCACGTTTTATTTATTGTGCTT	212	0.14527015452084832	No Hit
GTACGTCATGAATCAGTCCGACGATCAACGCGTACGTCATTTT	212	0.14527015452084832	No Hit
GTACGTCAGGTATCCGACGATCGCGCTGTACGTCATTTTTTTT	171	0.11717545482577861	No Hit
GTACGTCACGGTGTGAGCTCCTTCTGCGTATCTCTACCACACA	166	0.11374927193613595	No Hit
GTATGTCATTAATCAAATGGCTACACCCAGAGCAGCCCTGGGG	162	0.11100832562442184	No Hit
GTACGTCATGATAGGTCAGGAGTTCAAGACCAGCCTGACCAAT	159	0.10895261589063623	No Hit
GTACGTCATGCGAGGGTGTCGGTTGCCTCAACTGACAGGTAAG	148	0.10141501353342242	No Hit
CTACATCATCAACCTCATGCCTTCCTCAGCGGGACGTTGATGG	146	0.10004454037756536	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGT	35	5.5800047E-7	37.005486	6
TCACGCT	155	0.0	37.005486	6
CAGGTAT	20	0.0018353357	37.005486	7
CAACGAT	20	0.0018353357	37.005486	7
CATGCGA	230	0.0	37.005486	7
CCGATAT	35	5.5800047E-7	37.005486	18
ACGTTAA	20	0.0018353357	37.005486	3
AAAAGCG	20	0.0018353357	37.005486	8
CACGCTA	20	0.0018353357	37.005486	7
CACGCGC	45	2.582965E-9	37.005486	7
CACGCCA	25	1.227277E-4	37.005486	7
TTCCGGC	35	5.5800047E-7	37.005486	33
ACCTCGG	20	0.0018353357	37.005486	8
ATACTAC	20	0.0018353357	37.005486	8
AACGGTG	25	1.227277E-4	37.005486	8
GTCAGGC	210	0.0	37.005486	5
CGTTAAG	20	0.0018353357	37.005486	4
ATTCCCG	20	0.0018353357	37.005486	8
GCCGATA	35	5.5800047E-7	37.005486	17
ATATACG	25	1.227277E-4	37.005486	8