SRR2099256_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099256_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	459240
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCTAGTCCCCGCGCTAGTCTTTTTTTTTTTTTTTTTTTTTTT	2695	0.586839125511715	No Hit
AGCTAGTCACCCAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	2590	0.563975263478791	No Hit
AGCTAGTCCTATACAGTCCGACGATCCGCTGAGCTAGTCTTTT	2495	0.5432889121156694	No Hit
GGCCAGTCACCAGCATCCACGACGCCGCGGTGGCGGGCTACCT	1572	0.34230467729291875	No Hit
AGCTAGTCAGTTGTCTACAGTCCGACGATCTCCACAGCTAGTC	954	0.20773451789913772	No Hit
AGCTAATAAGCTGAGTCGACGCAGTTCCACATCAGACAACCAG	932	0.2029439944255727	No Hit
AGCTAGACACCCAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	710	0.15460325755596202	No Hit
AGCTAGTCCGACAGGGAAGGGAGCCACAGAGTTAACGTTTTTC	612	0.13326365299189966	No Hit
AGCTAGTCCCGCGCCGACGATCATTCTAGCTAGTCTTTTTTTT	582	0.1267311209824928	No Hit
AGCTAGCCCCCGAGGTCACTTGGGAAACTCACTTGACCTCTTA	537	0.11693232296838255	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTCGC	25	1.2298668E-4	37.013294	9
ACCGTAG	25	1.2298668E-4	37.013294	9
GTCGTAC	275	0.0	37.009266	6
GTCGCGA	80	0.0	37.009262	6
TCGTTAG	30	8.286861E-6	37.009262	7
TCACCGA	40	3.8162398E-8	37.009262	7
TCCGCAC	45	2.6066118E-9	37.009262	7
CGTTCGG	20	0.0018385232	37.009262	8
CTGCGTA	20	0.0018385232	37.009262	8
CCGTAAG	30	8.286861E-6	37.009262	8
CGTAGCG	20	0.0018385232	37.009262	8
TCTCGCG	90	0.0	37.009262	7
GTCGTCG	55	1.2732926E-11	37.009262	6
GTCCGCG	355	0.0	37.009262	6
CGTACGT	25	1.2306559E-4	37.009262	8
CCGACCG	30	8.286861E-6	37.009262	8
GTCCCGT	135	0.0	37.009262	6
CACCGTA	30	8.286861E-6	37.009262	8
CAACGGT	20	0.0018395074	37.00523	10
CCGTAGC	20	0.0018395074	37.00523	10