SRR2099250_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099250_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1238256
Sequences flagged as poor quality	0
Sequence length	47
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGTGACTAGTTGTCTCGCGATCCAGTCATGGGCCATCGAACGTGAC	1991	0.16079066041270948	No Hit
ACGTGACTAAGCTCCCTAGTGACGAGGGGTCGAACGTGACTTTTTTT	1906	0.15392616712537635	No Hit
ACGTGACTATGTGCTGAGCGCTCGCAGCTTCTCGCTCTCGCCTGCCT	1674	0.13519013838818467	No Hit
ACGTGACTCAATGGCAAGGGCATGATGGCGCATGCCTGTAATCCCAG	1578	0.12743729891072605	No Hit
ACGTGACTTATTTGTGTCCGACGATCCAGTATTGCCCAGTCGAACGT	1451	0.11718093835200476	No Hit
ACGTGACTTGTGCATCTGCTGAGTCTAGAAGGATCATGCAGATTGTT	1350	0.10902430515176184	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTTCGG	20	0.0011132482	40.992165	13
ATAAGCG	20	0.0011132482	40.992165	12
TGTCGCG	40	1.5535988E-8	40.992165	17
GTGACTA	38485	0.0	40.817684	3
TGACTCG	8510	0.0	40.806076	4
TGACTAG	10560	0.0	40.668777	4
TGACTAA	12650	0.0	40.642277	4
GTGACTC	22485	0.0	40.506477	3
GACTCGT	1645	0.0	40.37571	5
GACTAAC	2940	0.0	40.231804	5
GTGACTG	29805	0.0	40.09091	3
GACTAAG	3845	0.0	40.039127	5
GACTAGA	3975	0.0	40.018944	5
TGACTCA	5660	0.0	39.948467	4
GACTAGT	2395	0.0	39.886086	5
TGACTAC	7895	0.0	39.64861	4
TGACTGC	6250	0.0	39.621227	4
TGACTGA	9425	0.0	39.476284	4
TGACTTA	6595	0.0	39.44463	4
TGACTAT	8480	0.0	39.42749	4