SRR2099247_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099247_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25510
Sequences flagged as poor quality	0
Sequence length	47
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCTGACAGAGAACTGATTCCAGACAGCATTGGGAAAGACATAGAA	61	0.23912191297530383	No Hit
GATCTGACAAAATATAATGGATCTGACTTTTTTTTTTTTTTTTTTTT	56	0.21952175617404943	No Hit
GATCTGACGTGAACGAGAGGAGGAAGTCTTGACTATATCCCTAGCTA	40	0.15680125441003528	No Hit
GATCTGACACCACATAAAGTGGATTCAGTGAATCTAGGAAGACAGCA	38	0.1489611916895335	No Hit
GATCTGACTCGGCCGATGTCCGACGATCTCAGAAAGTCGATCATGGA	38	0.1489611916895335	No Hit
GATCTGACGCTGCCCGCGGTTAAAAAGGCCAAAGATAAAAAGATTTT	36	0.14112112896903176	No Hit
GATCCGATGGCCCCGTCGACATCAACGAGACGGGTGAACCCGTTGCG	35	0.13720109760878088	No Hit
GATCTGACAATAAATTTGTTTCGCTCGGGTCTGCGGGTTATAGCTTT	33	0.1293610348882791	No Hit
GATCTGGAACATGTCAGTCAACCCCTCAAGGGTTGGTGAAGAGATTC	28	0.10976087808702471	No Hit
GATCTGACCATAAAGGGAGCCGCAGCCGCTGCTGCTCGCCGAGCTCC	27	0.10584084672677382	No Hit
GATCTGACAAAATAAAAGTTTCGCTCGGGTCTGCGGGTTATAGCTTT	27	0.10584084672677382	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGACAAC	125	0.0	41.000004	5
GACAACG	55	3.6379788E-12	41.000004	6
GACAACA	55	3.6379788E-12	41.000004	6
TGACCTT	20	0.001091827	41.0	5
TGACCTA	20	0.001091827	41.0	5
TGACTTA	20	0.001091827	41.0	5
GACAGTA	20	0.001091827	41.0	6
TGACCGA	35	2.3912617E-7	41.0	5
TGACTGA	40	1.45118975E-8	41.0	5
CGCCCGC	20	0.001091827	41.0	5
TGACCCC	25	6.5549015E-5	41.0	5
TGACCCA	30	3.951871E-6	41.0	5
TGACTCG	20	0.001091827	41.0	5
TGACCAC	50	5.4569682E-11	41.0	5
TGACCAA	120	0.0	41.0	5
AGGATCT	40	1.45118975E-8	41.0	17
CCGCCCG	20	0.001091827	41.0	4
CCGCCAG	25	6.5549015E-5	41.0	8
TGACATA	60	0.0	41.0	5
TGACAGT	25	6.5549015E-5	41.0	5