SRR2099235_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099235_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67020
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGTCACCGCTGTTTGGCCTCCATGGACACCTGTACTCACA	242	0.3610862429125634	No Hit
GTATGCCATAAGCGTGTCGCTAGCTGCGTATGTAGCAGAAGAT	225	0.33572068039391223	No Hit
GTACGTCATGTATGTATTGTTATGGGCTATTACATCTCTAAGG	155	0.231274246493584	No Hit
GTACGTCACCGCCGTTTATTGGAAGCATCAACCTGCGCCGTCT	116	0.17308266189197255	No Hit
GTACGTCAATCTAGATAGGGGAAGGGAGAGACCTGGGTGGGAA	111	0.1656222023276634	No Hit
GTACGTCAATAACGTGGAGGGAGAGGGGATCTGGGAAGGAAGA	110	0.16413011041480155	No Hit
GTACGTCAGGAGAGTCTCGACGGGCTAGCACACATCTGGTTGA	108	0.16114592658907786	No Hit
GTACGTCAGCTCTGTTTGGCGTGGCTGAGCCAAGAAAGAAGGC	103	0.15368546702476873	No Hit
GTACGTCAATCTAATAGGGGAAGGGAGAGACCTGGGTGGGAAA	103	0.15368546702476873	No Hit
GTACGTCACCGCGGGGAAGGCCCTCAGAGCTGTCAGGTCTTGG	92	0.13727245598328858	No Hit
GTACGTCAGTCTAGTGAAAAATGACGAAATCACTAAAATACGT	86	0.12831990450611758	No Hit
GTACGTCAAACTCGTAAGGACCGCCGCTTTCGCTCGGGTCTGC	77	0.11489107729036109	No Hit
GTACGTCAAACGAGTAAAAGAAGCGGATTTAATTCTGCATTTA	75	0.11190689346463742	No Hit
GTACGTCAACCGAGTTTTGCCGGCGCACAAGCACGATCGGCTC	74	0.11041480155177558	No Hit
GTACGTCAATTCCGTTTTGCCGGCGCACAAGCACGATCGGCTC	72	0.10743061772605193	No Hit
GTACGTCATCCCAGCTGAGCACCTCCACGCCCTAATCATGACC	71	0.1059385258131901	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGG	40	3.722016E-8	37.022408	6
TCACGAG	25	1.2169074E-4	37.022408	6
GTCATAC	75	0.0	37.022408	5
GTCATAA	75	0.0	37.022408	5
CAGGTAT	20	0.0018241532	37.022408	7
CAAACGC	25	1.2169074E-4	37.022408	7
TCACCGC	100	0.0	37.022408	6
CGAAATT	20	0.0018241532	37.022408	11
CACGGGG	20	0.0018241532	37.022408	7
CAAAAAC	20	0.0018241532	37.022408	7
CAACGGC	20	0.0018241532	37.022408	7
CACGGCC	20	0.0018241532	37.022408	7
CGCGGGG	20	0.0018241532	37.022408	10
TCACAGG	20	0.0018241532	37.022408	6
TCACAAA	20	0.0018241532	37.022408	6
ACCGCTG	40	3.722016E-8	37.022408	8
ACCGCGG	25	1.2169074E-4	37.022408	8
GGCGTTT	25	1.2169074E-4	37.022408	11
GACCGTT	20	0.0018241532	37.022408	10
CAACCGA	25	1.2169074E-4	37.022408	7