SRR2099232_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099232_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1155805
Sequences flagged as poor quality	0
Sequence length	42
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGATGTCGTTATGCAAGGAAACCAAGTCCTGTGTTGTGTTT	2652	0.22945046958613263	No Hit
ACTCTGTCCGGGAGCAGAGATTGTGCCACTGCACTCCAGCCT	1812	0.15677385026020826	No Hit
CCGATGACAACGGAGGTCGCCTTGCATGTCGCCATCGGCGTG	1497	0.12952011801298663	No Hit
ACGATGTCACCGGAGGCCTAGGTTGGGGGTATCACTTGAGGT	1430	0.12372329242389503	No Hit
ACGATGTCTCCAGGGTTGCCCCGAGTAGCGTGGGACTCGTGG	1377	0.11913774382356886	No Hit
ACGATGTCGAGCTCCGACGATCAGTAGAACTCTGAACCCCTA	1349	0.11671518984603804	No Hit
ACGATGTCTCCCTTATTCTCTGAACTACTTTGTTCAGAGAAT	1307	0.11308135887974181	No Hit
ACGATGTCTTCAGTTGTGGTGGCACACGCGTTTAATCCCAGC	1173	0.10148770770155865	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	20	0.0020971294	36.03485	9
TATCGGC	60	1.8189894E-12	36.03485	9
AACGACT	35	6.970931E-7	36.0052	12
TAGTCGG	35	6.970931E-7	36.0052	12
TTAGCGT	25	1.4489017E-4	36.00208	10
AGCGATG	35	6.9756607E-7	36.00208	10
GCGTCTA	20	0.0021065155	36.00208	11
GCAATCG	25	1.458153E-4	35.963142	30
TGTCGCG	3945	0.0	35.756172	5
ATGTCGA	8355	0.0	35.726746	4
GTCTCGC	1145	0.0	35.715492	6
TGTCGGT	2250	0.0	35.7099	5
ATGTCCG	5775	0.0	35.65428	4
TGTCGCT	3830	0.0	35.65387	5
GATGTCC	22230	0.0	35.50033	3
ATGTCTC	11155	0.0	35.463387	4
ATGTCGT	7445	0.0	35.399494	4
TGTCGGG	2685	0.0	35.35921	5
TGTCGAG	3085	0.0	35.329414	5
ATGTCGC	12270	0.0	35.294525	4