SRR2099222_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099222_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2020905
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGTCTATAGTCTACGATCAGTCTAAGGAGGGAGCTTGCACTG	6019	0.2978368602185655	No Hit
ACGTGCATAATCCGTCCGACGATCTTCTTACGTGCATTTTTTT	4865	0.2407337306800666	No Hit
ACGTGCAGTCGTCGCGAGAACGGCGAGCCGGTCGAGCGTCGGC	4213	0.20847095731862708	No Hit
ACGTGCATATAAGGCAGAGCCTGGGCCTGCCCTCAGATGCCTT	3730	0.1845707739849226	No Hit
ACGTGCATGTCGTCAGTCCGACGATCAAGTAACGTGCATTTTT	2703	0.13375195766253237	No Hit
ACGTGAACGCGCGGGCCCCACAGTAATACGTGCCGACGATGTT	2203	0.1090105670479315	No Hit
AGGTGCGTTCGACAGCGCGATTCGCACAAGGCGATGGTGATCG	2164	0.10708073857999263	No Hit
ACGTGCATAAGGTGCACGTGCATTTTTTTTTTTTTTTTTTTTT	2145	0.1061405657366378	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGCATC	42495	36.7899	3
GTGCATA	39940	36.75168	3
GTGCATG	40935	36.51864	3
GCATTCG	3530	36.296337	5
TGCATAC	10045	36.289764	4
TGCATAT	11215	36.267624	4
GCATAGG	3270	36.23795	5
GAACGCG	810	36.116318	5
GCATGCG	2415	36.110638	5
GCATACC	3110	36.078094	5
TGCATTA	10440	36.033924	4
TGCATCT	13470	36.009914	4
TGCATGC	9885	35.978165	4
TGCATTC	13210	35.975876	4
GCATATC	2770	35.961178	5
TGCATAA	9390	35.942593	4
CGAGCTT	3700	35.92192	2
CGTGCAT	172935	35.909657	2
GTCGCGA	500	35.88683	11
TGCATCA	9395	35.86435	4