SRR2099221_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099221_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61488
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGTGCATCATCCGGTTCGATCAGGCTACTACAAAGTTCTGGG	245	0.39845173041894355	No Hit
ACGTGCATTCTATGTTACCGCTGTCTGGACAGCTGAGTGTGTT	194	0.3155087171480614	No Hit
ACGTGCATTGCATGGTTCAGTGGGTAAGAGCACCCGACTGCTC	171	0.27810304449648715	No Hit
ACGTCTATAGTCTACGATCAGTCTAAGGAGGGAGCTTGCACTG	140	0.22768670309653918	No Hit
ACGTGCAGTCGTCGCGAGAACGGCGAGCCGGTCGAGCGTCGGC	95	0.15450169138693728	No Hit
ACGTGCATAATCCGTCCGACGATCTTCTTACGTGCATTTTTTT	93	0.15124902419984387	No Hit
ACGTGCATATAAGGCAGAGCCTGGGCCTGCCCTCAGATGCCTT	90	0.14637002341920377	No Hit
ACGTGCATGCGAACGTCCGACGATCGGAAAACGTGCATTTTTC	83	0.1349856882643768	No Hit
ACGTGCATGTCGTCAGTCCGACGATCAAGTAACGTGCATTTTT	81	0.13173302107728338	No Hit
ACGTGCATCTCTTAGATCGGAGACATTGTCACAGTTGGAGAGT	77	0.12522768670309653	No Hit
ACGTGCATCACTACAGTCAACCTCTACCACGTGCGGGAGGATG	76	0.12360135310954982	No Hit
ACGTGCATCCTTCGGTGCAGCTAGGAGTTACACCTCCTGGCCT	67	0.10896435076762946	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATAAG	100	0.0	37.0	5
TTCTATG	30	8.184572E-6	37.0	8
CTATGTT	25	1.22007885E-4	37.0	10
CATGGCG	20	0.0018284128	37.0	6
CATGGCA	35	5.5165583E-7	37.0	6
CATATTA	45	2.5356712E-9	37.0	6
CATATGG	45	2.5356712E-9	37.0	6
CATATCG	20	0.0018284128	37.0	6
CATATAC	20	0.0018284128	37.0	6
CATATAA	55	1.0913936E-11	37.0	6
TTCAGTG	20	0.0018284128	37.0	16
ATAGGCC	30	8.184572E-6	37.0	7
ATAGGAG	20	0.0018284128	37.0	7
CATGCTA	40	3.733294E-8	37.0	6
CATGCGC	35	5.5165583E-7	37.0	6
CATGCGA	25	1.22007885E-4	37.0	6
CATGCCG	55	1.0913936E-11	37.0	6
TAGACCG	20	0.0018284128	37.0	8
ACCGCTG	25	1.22007885E-4	37.0	17
CATTGTA	20	0.0018284128	37.0	6