SRR2099175_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099175_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	413097
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACGTCATCTGTTAACCATCAAGAGACTGGAGGCCACATTGA	978	0.23674826977683208	No Hit
GTACGGCAACCTAACGTCCGTCACCATCTCGACGCCCTCTTCC	775	0.18760726899493338	No Hit
GTACGTCACGCAGCCCAAGACAGAACCTTGTGTGTGTCTTAGC	601	0.14548641118187738	No Hit
GTACGTCAACTACAACTAACCAGTACCCCGGAGCTCTTGCCTC	567	0.13725589873564806	No Hit
GTACTGCAACATAGTTCTTTGCTGTAAGAATCAACTGCAAAGC	566	0.13701382484017072	No Hit
GTACGTCAGTTATGGATGAGGACATTCTTCTGGTGGAACTTGG	492	0.11910035657484803	No Hit
GTACGTCCCAGCGCCTGAGGTACGGCGGATCCGAACATCGTGT	489	0.11837413488841604	No Hit
GTACGTCATATGAGGCCAACATGTTCTACATAGTGAGTTCCAG	488	0.1181320609929387	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCACCG	30	8.271549E-6	37.01793	13
CGATTCT	35	5.5983764E-7	37.017925	13
CGGTATC	25	1.2296236E-4	37.013447	10
TAGCGTT	20	0.0018372895	37.013443	11
ATCGTTC	20	0.0018372895	37.013443	10
CCCGCTT	20	0.0018372895	37.013443	11
GCGGTAT	25	1.2305006E-4	37.008965	9
TTCACGG	25	1.2305006E-4	37.008965	9
TAGCCGC	40	3.8149665E-8	37.00896	9
TGCGCAG	20	0.0018383827	37.00896	9
GAACGCA	20	0.0018383827	37.00896	9
AACCGTC	25	1.2313781E-4	37.004482	8
ACTGCCG	25	1.2313781E-4	37.004482	8
CCAGCGC	95	0.0	37.004482	8
AGAACGG	25	1.2313781E-4	37.004482	8
AAGCCCG	45	2.6084308E-9	37.004482	8
AATTCGA	25	1.2313781E-4	37.004482	8
ACAAGCG	35	5.614329E-7	37.004482	8
AATCGCG	70	0.0	37.004482	8
AAACTCG	30	8.292196E-6	37.00448	8