SRR2099152_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099152_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	430319
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCACTAGTCTATAAAGGAACAAAGAAGACCTCCCACTAGGAA	2443	0.56771836707187	No Hit
GTCACTTAGGTTAATCGTCGGCTGGTAGCCGTCGAGCAGGTGA	2170	0.5042770595767326	No Hit
GTCACTAGCTGGGAGGGAGGCAATGAAAGTTCTCAATCAACAA	1746	0.4057455050787904	No Hit
GTCACTAGTGTCGAAGCACAATTAGAGCACCAAACCAGGCCAA	1159	0.2693350746771581	No Hit
GTCACTAGGTTTGCACAGGAGGGGAGGAATCTGGGTAATGCTT	1016	0.23610391360827668	No Hit
GACGCTAGTCGATGTGACATACTTTCCTTTTGGTAAAGCAAAG	916	0.2128653394342337	No Hit
GTCACTAGCGAGTGGTTCATGGAACAGAATAGAAAGACCAGAA	711	0.1652262623774456	No Hit
GTCACTAGGATCTATCGGAGTGTCACTAGTTTTTTTTTTTTTT	667	0.15500128974086666	No Hit
GTCACTAGCTTCGCACAGCTGTTCCAATGAGCGATCTTGCCCT	637	0.1480297174886538	No Hit
GTCACTAGGAGAAATGAAGTGAAGTGAACTGATGAAGAAACTG	626	0.14547347432950905	No Hit
GTCACCTGCCAATGAGGAGAAGACCAAGGACCAGCCCTTTGAT	592	0.13757235911033444	No Hit
GTCACTAGCGAGGGATCGCCGCAGGCCGCCGCGCTTATGTGCA	555	0.12897408666593851	No Hit
GTCACTAGCTATACGGTGCGTTTTGGTGGATTCTGCAAGGATA	550	0.12781215795723638	No Hit
GTCACTAGGAAGGGTAGCAGGAGTGGCAGACTGGCCAAGCAGG	496	0.11526332790325317	No Hit
GTCACCCGGTGGAGTTTGGTACATCATACAATCCTAACAATTT	493	0.11456617067803188	No Hit
GTCACCCGGTGGATGTTTGGTACATCATACAATCCTAACAATT	492	0.11433378493629145	No Hit
GTCACTAGTTAGGGTGCCTATGATTTTTGCAGTAGCTTGCTTG	486	0.11293947048584888	No Hit
GTCACTAGAGAGACAGTCCGACGATCCGCTTGTCACTAGTGAC	452	0.10503835526667427	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	95	0.0	37.012447	7
TAGGGCG	175	0.0	37.012447	6
AGCGTTA	20	0.0018376181	37.012444	7
GGTACGT	30	8.28076E-6	37.012444	8
AGATCGA	30	8.28076E-6	37.012444	7
CGTATAG	85	0.0	37.012444	9
GGTCGGC	20	0.0018376181	37.012444	8
TAGCGTT	105	0.0	37.012444	6
TAGGTAA	90	0.0	37.012444	6
TAGCGGC	160	0.0	37.012444	6
TAGCGCT	85	0.0	37.012444	6
TAACGAC	35	5.605598E-7	37.012444	6
AGACGCT	40	3.81242E-8	37.012444	7
AGTGCGA	30	8.28076E-6	37.012444	7
GCCGAAA	35	5.605598E-7	37.012444	8
GGGCGAC	20	0.0018376181	37.012444	8
AGCGCAT	70	0.0	37.012444	7
TCGTAGA	40	3.81242E-8	37.012444	9
AGTTATC	35	5.605598E-7	37.012444	7
CCGGTGG	440	0.0	37.012444	6