SRR2099144_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099144_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	562238
Sequences flagged as poor quality	0
Sequence length	43
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCGGTACCCCACTGGCAGGCGCCGAGATAGGTGTTCATGGTG	2577	0.4583468210971155	No Hit
ATCGGTACTGAGGGATGCCTCGCCTTTCTGTACTCATAGCGGG	1558	0.2771068479896414	No Hit
ATCGGTACGGTGCGGCCAGACTGGGGATAGATCCCCTTGCTTT	1540	0.2739053568061924	No Hit
ATCGGTACACTCCGGAGGGAATGGGAGGAAGTGGGAACAGGGT	1452	0.25825362213155284	No Hit
ATCGGTACGGAGGGATCAGGATATCGGTACTTTTTTTTTTTTT	1409	0.2506056154155358	No Hit
ATCGGTACGGCCGGAAATATAAGAGGGCCTGAACTCTGCTGCC	1012	0.179994948758355	No Hit
ATCGGTACTGAGAGTTTTGATGAGTCTGGATTCCAGACAAGAA	1009	0.17946136689444683	No Hit
ATCGGTACACTCCGGGAGGGAATGGGAGGAAGTGGGAACAGGG	941	0.1673668446458617	No Hit
ATCGGTAATGCGCCAGACCTACTCCCGCGTCTCCGAGTATATC	890	0.1582959529594229	No Hit
ATCGGTACCCAGGATCAAGGAATCGGTACTTTTTTTTTTTTTT	695	0.12361313180539202	No Hit
ATCGGTACTTTTAGGACGTCGTCCGCGAGGAGGTCGCGCGGAT	645	0.1147201007402559	No Hit
ATCGGTACCCCACGTGGCAGGCGCCGAGATAGGTGTTCATGGT	594	0.10564920905381707	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCAA	55	1.2732926E-11	37.01594	6
ACCGCCG	25	1.2297014E-4	37.015938	7
CGTAGGG	25	1.2297014E-4	37.015938	8
CGTAGGC	20	0.0018372451	37.015938	8
CGTACTA	40	3.8127837E-8	37.015938	8
ACGCTAT	40	3.8127837E-8	37.015938	7
ATGCGCG	85	0.0	37.015938	8
CGTCGCG	20	0.0018372451	37.015938	8
AACTCGA	25	1.2297014E-4	37.015938	6
CGTTTCG	30	8.27992E-6	37.015938	8
TACAACG	165	0.0	37.015938	6
ACGAATC	30	8.27992E-6	37.015938	7
ACGCGTA	50	1.7826096E-10	37.015938	7
GGTACGG	4505	0.0	37.01264	4
ATAAGCG	20	0.0018428756	36.99288	10
GACGGGA	20	0.0018428756	36.99288	11
GCCCGGT	25	1.2342194E-4	36.992878	10
AACGTGT	20	0.0018469058	36.97643	26
GCCGTAA	20	0.0018469058	36.97643	26
TCTCCGC	25	1.2381029E-4	36.97314	30