SRR2099054_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2099054_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	331999
Sequences flagged as poor quality	0
Sequence length	43
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTCAGCGCTTCGCGTATCAACCCCTCAAGGGTTGGTACGC	1053	0.3171696300290061	No Hit
CATGTCAGCGCTTCGCGTATCAACCNCTCAAGGGTTGGTACGC	640	0.1927716649748945	No Hit
CATGTCAGGAACTAACGGAAATTGCACTTTCCGTTCTAAGTGC	531	0.15994024078385777	No Hit
CATGTCAGAGATTGAAATTGCAATTTCCGTTCTAAGTGCAATT	425	0.12801243377239088	No Hit
CATGTCAGGGTATAGAGAAACCGCGTATCAACCCCTCAAGGGT	392	0.11807264479712289	No Hit
CATGTCAGGGGTAGGAAATTGCACTCCGTTCTAAGTGCAATTT	392	0.11807264479712289	No Hit
CATGTCAGGAACTAACGGAAATTGCNCTTTCCGTTCTAAGTGC	360	0.10843406154837816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACAGG	20	3.537643E-4	51.710575	26
GTGAGCA	20	3.537643E-4	51.710575	25
ACTTAAG	55	1.2732926E-11	47.009613	25
ATCCCGC	105	0.0	44.32335	24
TCCCGCT	105	0.0	44.32335	25
CCCGCTC	105	0.0	44.32335	26
CTTCGCC	35	2.3945813E-6	44.323345	26
CGCCTTT	30	4.645219E-5	43.6492	21
CCCTTCA	30	4.645219E-5	43.6492	22
GACGCCT	30	4.645219E-5	43.6492	22
CTTAAGT	60	3.45608E-11	43.092148	26
CCGTGAC	25	9.973088E-4	41.903233	20
CGCCAGC	25	9.973088E-4	41.903233	21
CGGTGCT	95	0.0	38.102528	26
CCGGTGC	95	0.0	38.102528	25
CACTCCG	110	0.0	38.093845	22
TACCATG	55	3.3000106E-8	37.60769	26
CCGCCTT	35	1.15240655E-4	37.4136	20
CTCCGCA	35	1.2429465E-4	36.936123	26
TGCTCGC	70	1.8189894E-10	36.936123	24