##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088722_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1707743 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42386237273407 31.0 31.0 34.0 30.0 34.0 2 31.62421453345146 31.0 31.0 34.0 30.0 34.0 3 31.679475775921787 31.0 31.0 34.0 30.0 34.0 4 35.4161849880222 37.0 35.0 37.0 33.0 37.0 5 35.31919029971137 37.0 35.0 37.0 33.0 37.0 6 35.386491410007245 37.0 35.0 37.0 33.0 37.0 7 35.22275131562536 37.0 35.0 37.0 32.0 37.0 8 35.285465084617535 37.0 35.0 37.0 32.0 37.0 9 36.83682029438856 39.0 37.0 39.0 32.0 39.0 10 36.68524362272309 39.0 35.0 39.0 32.0 39.0 11 36.76797972528653 39.0 37.0 39.0 32.0 39.0 12 36.61056259636257 39.0 35.0 39.0 32.0 39.0 13 36.64818652455317 39.0 35.0 39.0 32.0 39.0 14 37.52543561882555 39.0 36.0 41.0 32.0 41.0 15 37.54664138573544 39.0 36.0 41.0 32.0 41.0 16 37.41616800654431 39.0 36.0 41.0 32.0 41.0 17 37.526929403311854 39.0 36.0 41.0 32.0 41.0 18 37.508662603213715 39.0 36.0 41.0 32.0 41.0 19 37.58037128537491 39.0 37.0 41.0 32.0 41.0 20 37.468956394492615 39.0 36.0 41.0 32.0 41.0 21 37.4049994642051 39.0 36.0 41.0 32.0 41.0 22 37.283060741575284 39.0 36.0 41.0 31.0 41.0 23 37.07583576685719 39.0 36.0 41.0 31.0 41.0 24 36.91659810638954 39.0 36.0 40.0 31.0 41.0 25 37.07499957546305 39.0 36.0 41.0 31.0 41.0 26 36.9214905287271 39.0 36.0 41.0 31.0 41.0 27 36.79844449662508 39.0 35.0 40.0 30.0 41.0 28 36.612347993814055 39.0 35.0 40.0 30.0 41.0 29 36.485848866017896 39.0 35.0 40.0 30.0 41.0 30 36.23597637349414 38.0 35.0 40.0 30.0 41.0 31 36.016605543105726 38.0 35.0 40.0 30.0 41.0 32 35.82127989984441 38.0 35.0 40.0 29.0 41.0 33 35.650878381583176 38.0 34.0 40.0 28.0 41.0 34 35.44563496966464 38.0 34.0 40.0 27.0 41.0 35 35.270244995880525 38.0 34.0 40.0 26.0 41.0 36 35.04864490734261 38.0 34.0 40.0 25.0 41.0 37 34.90829943381411 38.0 33.0 40.0 24.0 41.0 38 34.68244343557549 38.0 33.0 40.0 24.0 41.0 39 34.54491103169505 38.0 33.0 40.0 23.0 41.0 40 34.316234936989936 38.0 33.0 40.0 22.0 41.0 41 34.13163221866522 38.0 33.0 40.0 21.0 41.0 42 33.79226850878616 38.0 33.0 40.0 18.0 41.0 43 33.40720061508084 37.0 32.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 4.0 14 3.0 15 14.0 16 20.0 17 48.0 18 129.0 19 324.0 20 739.0 21 1447.0 22 2643.0 23 4762.0 24 7931.0 25 12139.0 26 17866.0 27 24665.0 28 32920.0 29 42428.0 30 53150.0 31 63615.0 32 77472.0 33 93577.0 34 113542.0 35 136202.0 36 175420.0 37 240918.0 38 302596.0 39 303166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.36734859987715 21.665320835746364 14.753566549533506 22.213764014842983 2 18.986639090308085 24.260149214489534 34.9033783186346 21.849833376567783 3 19.96623613740475 24.85614053168422 33.73827326477111 21.43935006613993 4 13.396043784105688 16.551202376469995 36.3972799185826 33.655473920841715 5 11.800194759984377 39.42700980182615 34.95584522963935 13.816950208550116 6 31.26225667445277 37.54622329003837 12.921792096351734 18.26972793915712 7 24.81948396216527 34.33789510482549 21.41235537197342 19.430265561035824 8 27.188575798583276 34.44698646107757 18.81740987958961 19.547027860749537 9 23.885561234916494 14.447255822451035 22.691236327714414 38.97594661491805 10 16.251274342802166 28.07559451275748 33.24815267871102 22.42497846572933 11 31.61892626700856 22.641755814545867 24.48155255211118 21.257765366334397 12 20.942671116204252 28.26262499685257 31.40156334998884 19.39314053695433 13 32.07297585175287 21.08595965552194 27.215921833671697 19.6251426590535 14 19.694532491130108 23.775298742258055 29.237478941503493 27.292689825108347 15 21.788407272054403 29.7852194387563 27.30053643903093 21.125836850158368 16 20.36085054952648 29.011391058256425 28.075243171835574 22.552515220381522 17 20.839669669265223 27.003419132738355 27.79048135463006 24.36642984336636 18 22.773098762518718 25.23160686356202 30.96724741369164 21.028046960227623 19 22.26898309640268 24.310917977705078 32.81254849236683 20.60755043352542 20 23.46535749231588 23.624514929939693 32.709839829529386 20.200287748215043 21 21.617128572624804 25.044049368084075 33.80912701735566 19.529695041935465 22 19.786700926310342 25.212400226497785 33.33147903402327 21.66941981316861 23 21.314038470659813 25.450609371550637 34.36869599231266 18.86665616547689 24 21.17420478374088 25.525386431096482 31.253180367303514 22.047228417859127 25 20.95245010519733 26.14251676042589 32.556655187577995 20.348377946798788 26 20.706394346221884 27.008162235184102 32.382682874413774 19.902760544180243 27 19.196916632069343 27.172882570738103 32.085155670378974 21.545045126813577 28 19.954524773341188 26.30454348224528 32.21216541364831 21.528766330765226 29 20.33701792365713 26.155984829098994 31.351204484515527 22.15579276272835 30 20.608545899470823 26.388338292120068 33.48156016449782 19.521555643911288 31 21.536847171969082 26.23714458205948 32.910631166399156 19.315377079572276 32 21.042451938025803 26.10919792966506 31.766899351951672 21.081450780357468 33 20.413903028734417 26.125886623455635 32.48515730996994 20.975053037840002 34 19.239370326799758 26.822595671596954 33.32445221558513 20.613581786018152 35 18.835445380247496 29.40395598166703 31.633038460705155 20.12756017738032 36 21.81013185239231 26.449881510274086 31.35518634829714 20.384800289036463 37 20.696615357228808 27.40224963592297 31.300142937198395 20.600992069649823 38 20.407813119421363 25.59957792243915 32.81963386762528 21.172975090514203 39 19.80374096102282 25.349188958760188 33.69476554727497 21.15230453294202 40 18.329221668600017 26.127057759861994 33.16511910750037 22.378601464037622 41 20.400552073701956 25.237696772875072 32.931067496690076 21.430683656732892 42 18.907645939699357 27.700186737699994 31.97770390509579 21.41446341750486 43 19.430031333754552 27.780058240613485 30.808089976067826 21.981820449564133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 367.0 1 422.0 2 477.0 3 950.5 4 1424.0 5 1424.0 6 2519.0 7 3614.0 8 4064.5 9 4515.0 10 6947.0 11 9379.0 12 9379.0 13 18105.0 14 26831.0 15 41515.5 16 56200.0 17 51812.0 18 47424.0 19 47424.0 20 50111.0 21 52798.0 22 40621.5 23 28445.0 24 30471.5 25 32498.0 26 32498.0 27 34909.0 28 37320.0 29 39833.0 30 42346.0 31 45771.0 32 49196.0 33 49196.0 34 54696.5 35 60197.0 36 66532.0 37 72867.0 38 76633.0 39 80399.0 40 80399.0 41 82565.5 42 84732.0 43 90545.5 44 96359.0 45 106474.0 46 116589.0 47 116589.0 48 163450.5 49 210312.0 50 189325.0 51 168338.0 52 147934.0 53 127530.0 54 127530.0 55 110381.0 56 93232.0 57 76293.5 58 59355.0 59 51705.5 60 44056.0 61 44056.0 62 38463.5 63 32871.0 64 28307.5 65 23744.0 66 19982.0 67 16220.0 68 16220.0 69 13594.5 70 10969.0 71 9088.5 72 7208.0 73 5783.0 74 4358.0 75 4358.0 76 3466.0 77 2574.0 78 2012.0 79 1450.0 80 1100.0 81 750.0 82 750.0 83 597.0 84 444.0 85 307.5 86 171.0 87 138.0 88 105.0 89 105.0 90 75.0 91 45.0 92 33.0 93 21.0 94 13.0 95 5.0 96 5.0 97 6.0 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1707743.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.06545548573828 #Duplication Level Percentage of deduplicated Percentage of total 1 81.86331096973382 39.34797329330891 2 10.231604990594573 9.835735084461621 3 3.1006787845732413 4.471066142864346 4 1.343356937230574 2.582762522716555 5 0.7424040217040382 1.7841993728824266 6 0.4453132992664551 1.2842511937859427 7 0.32594139057461047 1.0966564979736504 8 0.25158061223773287 0.9673869374870028 9 0.18720859994968778 0.8098439964686195 >10 1.2925905464974892 12.193097295995363 >50 0.12554866202353013 4.19831227023897 >100 0.07750335660703198 7.140311304348998 >500 0.005623208814537335 1.9133621902651368 >1k 0.006234427163943568 5.3535831778595275 >5k 6.112183494062321E-4 1.991508969317238 >10k+ 4.889746795249856E-4 5.029949750025713 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27456 1.6077360586458267 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26123 1.5296798171621842 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21108 1.2360173632683606 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10919 0.6393819210501814 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7960 0.46611228972977786 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7071 0.4140552764672436 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6847 0.40093854871605394 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6057 0.35467866066498294 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5959 0.34894009227383743 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4935 0.2889779082683987 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3522 0.20623712115933135 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3431 0.2009084505104105 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3260 0.19089523423606478 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3190 0.186796256813818 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2988 0.1749677791096201 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2763 0.1617924945381126 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2715 0.15898176716285764 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2665 0.1560539261469671 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2519 0.14750463038056663 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2480 0.145220914388172 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2380 0.13936523235639084 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2197 0.1286493342382314 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2190 0.12823943649600672 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2018 0.11816766340134319 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1979 0.11588394740894854 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1838 0.10762743574413715 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1788 0.10469959472824658 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.8556820317811284E-5 0.0 3 0.0 0.0 0.0 5.8556820317811284E-5 0.0 4 0.0 0.0 0.0 1.1711364063562257E-4 0.0 5 0.0 0.0 0.0 1.1711364063562257E-4 0.0 6 0.0 0.0 0.0 1.1711364063562257E-4 0.0 7 5.8556820317811284E-5 0.0 0.0 1.1711364063562257E-4 0.0 8 5.8556820317811284E-5 0.0 0.0 1.1711364063562257E-4 0.0 9 5.8556820317811284E-5 0.0 0.0 4.09897742224679E-4 0.0 10 5.8556820317811284E-5 0.0 0.0 7.026818438137354E-4 0.0 11 1.1711364063562257E-4 0.0 0.0 0.0013468068673096595 0.0 12 1.1711364063562257E-4 0.0 0.0 0.0027521705549371305 0.0 13 1.1711364063562257E-4 0.0 0.0 0.003044954656526187 0.0 14 1.7567046095343385E-4 0.0 0.0 0.0036305228597042997 0.0 15 1.7567046095343385E-4 0.0 0.0 0.004743102445742714 0.0 16 1.7567046095343385E-4 0.0 0.0 0.007143932078772977 0.0 17 1.7567046095343385E-4 0.0 0.0 0.009954659454027919 0.0 18 1.7567046095343385E-4 0.0 0.0 0.01136002314165539 0.0 19 1.7567046095343385E-4 0.0 0.0 0.014404977798181576 0.0 20 1.7567046095343385E-4 0.0 0.0 0.02500376227570542 0.0 21 1.7567046095343385E-4 0.0 0.0 0.04227802426945975 0.0 22 1.7567046095343385E-4 0.0 0.0 0.06710611608421173 0.0 23 1.7567046095343385E-4 0.0 0.0 0.08156965070271112 0.0 24 1.7567046095343385E-4 0.0 0.0 0.10358701514220817 0.0 25 1.7567046095343385E-4 0.0 0.0 0.11734786791689382 0.0 26 1.7567046095343385E-4 0.0 0.0 0.13866255051257712 0.0 27 1.7567046095343385E-4 0.0 0.0 0.19271049566591694 0.0 28 1.7567046095343385E-4 0.0 0.0 0.3205985912400168 0.0 29 1.7567046095343385E-4 0.0 0.0 0.490881824724212 0.0 30 1.7567046095343385E-4 0.0 0.0 0.7625269141785386 0.0 31 1.7567046095343385E-4 0.0 0.0 1.0837696304420512 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8195 0.0 24.245274 1 GTATTGG 545 0.0 21.385323 1 ATTGGAC 740 0.0 17.5 3 CGAATTA 75 2.0680073E-4 17.266666 15 GGACGCT 65 0.0015803592 17.076923 31 GTTATGC 80 3.3837697E-4 16.1875 3 CATTGCG 70 0.0025931846 15.857143 29 CAATGCG 105 9.348334E-6 15.857142 19 GTATCAA 13015 0.0 15.280446 2 TAGGACG 85 5.366045E-4 15.235294 4 AATGCGA 135 3.9751285E-7 15.074075 20 TATTGGA 740 0.0 15.0 2 GGACCCT 945 0.0 14.878307 6 TTGGACC 1025 0.0 14.799999 4 CTTACTC 140 5.9992453E-7 14.535715 3 TCTACAC 205 9.276846E-11 14.439025 3 GACCCTC 925 0.0 14.4 7 GTATTGA 180 3.3323886E-9 14.388888 1 TGCGACG 90 8.276916E-4 14.388888 22 TCCGGTC 170 2.4385372E-8 14.147059 8 >>END_MODULE