##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088719_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2852262 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.422878052577218 31.0 31.0 34.0 30.0 34.0 2 31.61197077968293 31.0 31.0 34.0 30.0 34.0 3 31.652851315902957 31.0 31.0 34.0 30.0 34.0 4 35.38495587011291 37.0 35.0 37.0 33.0 37.0 5 35.306172434369635 37.0 35.0 37.0 33.0 37.0 6 35.388588425607466 37.0 35.0 37.0 33.0 37.0 7 35.21085264958128 37.0 35.0 37.0 32.0 37.0 8 35.29798910478771 37.0 35.0 37.0 32.0 37.0 9 36.82972076197769 39.0 37.0 39.0 32.0 39.0 10 36.68823761631996 39.0 35.0 39.0 32.0 39.0 11 36.778954738379575 39.0 37.0 39.0 32.0 39.0 12 36.613773909970405 39.0 35.0 39.0 32.0 39.0 13 36.67063509593439 39.0 35.0 39.0 32.0 39.0 14 37.50673745960224 39.0 36.0 41.0 32.0 41.0 15 37.52567015232121 39.0 36.0 41.0 32.0 41.0 16 37.3795377142773 39.0 36.0 41.0 32.0 41.0 17 37.54625276359605 39.0 36.0 41.0 32.0 41.0 18 37.53525377402216 39.0 36.0 41.0 32.0 41.0 19 37.62284635843411 39.0 37.0 41.0 32.0 41.0 20 37.52450651447868 39.0 36.0 41.0 32.0 41.0 21 37.464299913542305 39.0 36.0 41.0 32.0 41.0 22 37.35454807447562 39.0 36.0 41.0 31.0 41.0 23 37.17157890824896 39.0 36.0 41.0 31.0 41.0 24 36.99100573509727 39.0 36.0 41.0 31.0 41.0 25 37.14192209551577 39.0 36.0 41.0 31.0 41.0 26 36.967765583947056 39.0 36.0 41.0 31.0 41.0 27 36.83144956529239 39.0 35.0 41.0 31.0 41.0 28 36.62907580018946 39.0 35.0 40.0 30.0 41.0 29 36.49057625141028 39.0 35.0 40.0 30.0 41.0 30 36.2211732302292 38.0 35.0 40.0 30.0 41.0 31 35.95970601578677 38.0 35.0 40.0 30.0 41.0 32 35.76390913597699 38.0 35.0 40.0 29.0 41.0 33 35.563359186498296 38.0 34.0 40.0 28.0 41.0 34 35.350128073788454 38.0 34.0 40.0 27.0 41.0 35 35.15043744228265 38.0 34.0 40.0 26.0 41.0 36 34.8909416456132 38.0 33.0 40.0 25.0 41.0 37 34.72347456159357 38.0 33.0 40.0 24.0 41.0 38 34.45448349415306 38.0 33.0 40.0 23.0 41.0 39 34.28504253816795 38.0 33.0 40.0 22.0 41.0 40 34.01751311765889 37.0 33.0 40.0 20.0 41.0 41 33.78824876536587 37.0 33.0 40.0 18.0 41.0 42 33.40843653212784 37.0 33.0 40.0 15.0 41.0 43 32.991794232086676 37.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 2.0 13 1.0 14 10.0 15 14.0 16 37.0 17 79.0 18 230.0 19 583.0 20 1252.0 21 2542.0 22 4771.0 23 8127.0 24 13569.0 25 20680.0 26 30944.0 27 42485.0 28 56878.0 29 73247.0 30 89492.0 31 108435.0 32 130548.0 33 157769.0 34 190408.0 35 229358.0 36 293727.0 37 408796.0 38 488234.0 39 500041.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.685581478840305 21.556014138953575 15.617604553859357 21.140799828346765 2 19.110481435436157 24.857148466725707 34.767458248926644 21.264911848911495 3 20.27913284263507 24.37777455226764 34.718128979736086 20.624963625361204 4 13.213863242577295 16.44820847453705 35.59455618032285 34.74337210256281 5 11.470159473428458 39.87046070802752 34.33152354166623 14.32785627687779 6 31.217118203026228 37.02086273981843 12.135000220877325 19.627018836278012 7 24.159526719494913 35.25773579005014 20.46617737080254 20.1165601196524 8 28.045670418776396 33.856532113810026 18.128944676190336 19.968852791223245 9 23.633172548664884 14.361829313015424 23.015206877909534 38.98979126041016 10 16.65302836836167 28.45453888878371 32.16878393359376 22.72364880926086 11 31.317634915726533 22.37883476342636 24.599878973250004 21.7036513475971 12 21.473167612231975 28.705076882838952 31.04157331970205 18.780182185227023 13 33.411096175596775 20.91518941808291 27.323156147647026 18.350558258673292 14 19.504239091640247 24.351199153513946 29.80038299426911 26.344178760576693 15 21.42134909065156 29.900268628898747 28.046897515024916 20.631484765424776 16 19.780581166807256 28.9737408414795 28.711983681723492 22.533694309989755 17 20.752371275850535 26.705085297213227 27.757197620695433 24.7853458062408 18 23.060539319319194 24.371148232525623 31.792871762832448 20.77544068532274 19 22.12160032984347 23.567715728779472 34.1612727021571 20.14941123921996 20 23.577812977910163 22.506803372200732 34.01170719940875 19.903676450480358 21 21.40658887577649 24.173340317263982 35.59220716750425 18.82786363945528 22 19.01992173229528 24.460025060811383 34.930486750515904 21.58956645637743 23 20.98099683689647 24.727602162774666 36.192748071530595 18.098652928798266 24 20.612797842554436 24.769989573187875 32.60317600557032 22.01403657868737 25 20.445772513184274 25.74444423408509 34.016124745903426 19.793658506827214 26 20.089809421434637 26.740565908741903 33.79710559548877 19.372519074334686 27 18.247096514976533 26.86877993676598 33.48300401576012 21.401119532497365 28 19.24707477784299 25.99624438428167 33.37133825714468 21.38534258073066 29 19.50210043817854 25.685964332869844 32.4211801019682 22.390755126983425 30 19.93901682243777 26.070886896084584 35.20921289839433 18.78088338308332 31 21.156506660327835 25.92608953875906 34.355013669852205 18.56239013106089 32 20.820036868983287 25.668925224961804 32.90097473514004 20.610063170914874 33 19.90563980447799 25.653113213302287 33.843104174861914 20.598142807357807 34 18.239067799521923 26.78908880039772 34.88708260321107 20.08476079686929 35 17.794508358629045 29.90882324274558 32.86966625085634 19.427002147769034 36 21.395895608467946 26.28327972675722 32.56527626143742 19.75554840333742 37 20.222651355310276 27.87976700597631 32.200828675626575 19.69675296308684 38 19.891650907244845 25.339081753359267 34.2041158911769 20.565151448218995 39 19.12569742891782 25.076413036390065 35.10336708198616 20.694522452705957 40 17.3968590543225 25.862841492120992 34.44038450885648 22.29991494470003 41 19.872017367268505 24.89886973917543 34.28966202964524 20.939450863910817 42 18.258175441106044 27.88660368507521 33.03781349679657 20.817407377022167 43 18.872144284080495 28.175602381548398 31.500507316649028 21.451746017722076 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 714.0 1 780.5 2 847.0 3 1722.5 4 2598.0 5 2598.0 6 4549.5 7 6501.0 8 7437.5 9 8374.0 10 13517.5 11 18661.0 12 18661.0 13 36521.0 14 54381.0 15 86920.0 16 119459.0 17 108924.0 18 98389.0 19 98389.0 20 101828.0 21 105267.0 22 78182.5 23 51098.0 24 53599.0 25 56100.0 26 56100.0 27 58974.0 28 61848.0 29 62776.0 30 63704.0 31 67072.5 32 70441.0 33 70441.0 34 78032.5 35 85624.0 36 94719.5 37 103815.0 38 109296.5 39 114778.0 40 114778.0 41 118024.5 42 121271.0 43 130987.0 44 140703.0 45 163987.0 46 187271.0 47 187271.0 48 289477.0 49 391683.0 50 346958.5 51 302234.0 52 261180.0 53 220126.0 54 220126.0 55 185911.5 56 151697.0 57 121834.0 58 91971.0 59 79927.0 60 67883.0 61 67883.0 62 58334.0 63 48785.0 64 42412.5 65 36040.0 66 30572.0 67 25104.0 68 25104.0 69 21112.5 70 17121.0 71 14303.5 72 11486.0 73 9416.0 74 7346.0 75 7346.0 76 5782.5 77 4219.0 78 3264.0 79 2309.0 80 1759.5 81 1210.0 82 1210.0 83 908.0 84 606.0 85 455.5 86 305.0 87 227.5 88 150.0 89 150.0 90 119.0 91 88.0 92 56.0 93 24.0 94 22.0 95 20.0 96 20.0 97 15.0 98 10.0 99 5.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2852262.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.74693374813567 #Duplication Level Percentage of deduplicated Percentage of total 1 77.37619869591381 29.980904445531536 2 12.05203854915207 9.339590783879446 3 4.110317961603821 4.777866532261059 4 1.9263686183974844 2.9856350892613985 5 1.038220353006802 2.011392761696029 6 0.6277610318650745 1.4594289066802393 7 0.43259823513420015 1.1733298609413685 8 0.31585821116528445 0.9790829745460737 9 0.2311983066537495 0.8062402923534585 >10 1.572911603588786 11.825959689155336 >50 0.18031153829781357 4.8407648853864105 >100 0.11505222861050246 8.340763515183653 >500 0.011172763918930639 3.001124558304251 >1k 0.0081751931114126 6.86409265950443 >5k 9.99190269172651E-4 2.537980882845094 >10k+ 8.175193111412601E-4 9.075842162470295 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 60621 2.1253657623317914 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 55472 1.9448423742278935 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 45387 1.5912633551896704 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22331 0.7829224664494356 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16607 0.5822396399769727 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 16457 0.5769806560547384 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 15321 0.5371526178170168 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 13484 0.47274759471605343 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12186 0.42723985384231883 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9613 0.33703074962959223 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 8346 0.2926098654331194 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7648 0.2681380602483222 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6739 0.23626861767958202 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6591 0.23107975354297747 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6393 0.22413789476562812 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5789 0.20296171950543113 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5457 0.19132183509088577 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5290 0.1854668329907982 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5239 0.1836787784572385 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5005 0.17547476353855293 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4856 0.17025083950913344 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4823 0.16909386304624188 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4801 0.16832254540431418 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4528 0.15875119466584767 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4432 0.15538544495561768 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4050 0.14199256590032755 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3751 0.13150965794867372 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3746 0.13133435848459923 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3718 0.13035268148578216 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3675 0.12884510609474165 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3657 0.12821402802407353 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3638 0.1275478900605905 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 3369 0.11811677889338357 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3341 0.11713510189456648 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3046 0.10679243351417225 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3034 0.10637171480039351 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2970 0.10412788166024019 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 2937 0.10297090519734863 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2932 0.10279560573327415 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 2903 0.10177886884164217 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2889 0.10128803034223363 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2877 0.10086731162845489 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.505989281489569E-5 0.0 0.0 0.0 3.505989281489569E-5 7 3.505989281489569E-5 0.0 0.0 0.0 7.011978562979138E-5 8 3.505989281489569E-5 0.0 0.0 0.0 7.011978562979138E-5 9 3.505989281489569E-5 0.0 0.0 1.7529946407447843E-4 7.011978562979138E-5 10 3.505989281489569E-5 0.0 0.0 5.258983922234353E-4 7.011978562979138E-5 11 3.505989281489569E-5 0.0 0.0 0.001682874855114993 7.011978562979138E-5 12 3.505989281489569E-5 0.0 0.0 0.0025944320683022807 7.011978562979138E-5 13 3.505989281489569E-5 0.0 0.0 0.002804791425191655 7.011978562979138E-5 14 3.505989281489569E-5 0.0 0.0 0.0032255101389704033 7.011978562979138E-5 15 3.505989281489569E-5 0.0 0.0 0.004417546494676856 7.011978562979138E-5 16 3.505989281489569E-5 0.0 0.0 0.00641596038512591 7.011978562979138E-5 17 3.505989281489569E-5 0.0 0.0 0.00869485341809413 7.011978562979138E-5 18 3.505989281489569E-5 0.0 0.0 0.010132309023504853 7.011978562979138E-5 19 3.505989281489569E-5 0.0 0.0 0.012235902592398595 7.011978562979138E-5 20 3.505989281489569E-5 0.0 0.0 0.022227972044643864 7.011978562979138E-5 21 3.505989281489569E-5 0.0 0.0 0.03793480402571713 1.4023957125958275E-4 22 3.505989281489569E-5 0.0 0.0 0.06167035146140151 1.4023957125958275E-4 23 3.505989281489569E-5 0.0 0.0 0.073941313946615 1.4023957125958275E-4 24 3.505989281489569E-5 0.0 0.0 0.09171667960376712 1.4023957125958275E-4 25 3.505989281489569E-5 0.0 0.0 0.10100755119971447 1.4023957125958275E-4 26 3.505989281489569E-5 0.0 0.0 0.11527692757537701 1.4023957125958275E-4 27 3.505989281489569E-5 0.0 0.0 0.18325805974345974 1.4023957125958275E-4 28 3.505989281489569E-5 0.0 0.0 0.3315964662432834 1.4023957125958275E-4 29 3.505989281489569E-5 0.0 0.0 0.5372928573882764 1.4023957125958275E-4 30 7.011978562979138E-5 0.0 0.0 0.8683283653465215 1.4023957125958275E-4 31 7.011978562979138E-5 0.0 0.0 1.2185065747816997 1.4023957125958275E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16795 0.0 24.134266 1 GTATTGG 925 0.0 24.0 1 ATTGGAC 1045 0.0 21.77512 3 TTGGACC 1695 0.0 19.864305 4 GGACCCT 1695 0.0 18.882004 6 TATTGGA 1150 0.0 18.82174 2 TGGACCC 1770 0.0 18.70904 5 TAGGTCG 140 9.458745E-11 18.5 21 TTTTTAC 2410 0.0 17.42531 1 GACCCTC 1895 0.0 16.596306 7 GTCGTCA 170 8.54925E-11 16.32353 24 TTCGTTA 325 0.0 15.938461 30 CTGTGCG 250 0.0 15.540001 9 CGCCGTT 155 7.221388E-9 15.516129 25 ACTCTGT 1605 0.0 15.445483 37 ATTAGAC 265 0.0 15.358489 3 AGTGCGC 170 1.4897523E-9 15.235295 8 GTATCAA 26815 0.0 15.136678 2 CCGTTTA 125 2.9622825E-6 14.800001 27 TACATCG 75 0.0041063884 14.8 5 >>END_MODULE