##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088714_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 818754 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.639488784176933 31.0 31.0 34.0 30.0 34.0 2 31.85449231393068 31.0 31.0 34.0 30.0 34.0 3 31.940817388373066 31.0 31.0 34.0 30.0 34.0 4 35.64083839590402 37.0 35.0 37.0 33.0 37.0 5 35.51914860873962 37.0 35.0 37.0 33.0 37.0 6 35.568257376452515 37.0 35.0 37.0 33.0 37.0 7 35.439400601401644 37.0 35.0 37.0 33.0 37.0 8 35.46261880857987 37.0 35.0 37.0 33.0 37.0 9 37.08385302545087 39.0 37.0 39.0 33.0 39.0 10 36.8991662941494 39.0 37.0 39.0 33.0 39.0 11 36.98675182044912 39.0 37.0 39.0 33.0 39.0 12 36.853334456991966 39.0 37.0 39.0 32.0 39.0 13 36.88755352645605 39.0 37.0 39.0 33.0 39.0 14 37.90988013493674 40.0 37.0 41.0 33.0 41.0 15 37.91460927213791 40.0 37.0 41.0 33.0 41.0 16 37.806275144915325 40.0 37.0 41.0 32.0 41.0 17 37.810306880943486 40.0 37.0 41.0 32.0 41.0 18 37.767232892908005 40.0 37.0 41.0 32.0 41.0 19 37.817536158601975 40.0 37.0 41.0 32.0 41.0 20 37.696544993978655 40.0 37.0 41.0 32.0 41.0 21 37.62600854469108 39.0 37.0 41.0 32.0 41.0 22 37.48575518409681 39.0 36.0 41.0 32.0 41.0 23 37.316158455409074 39.0 36.0 41.0 31.0 41.0 24 37.15986853194 39.0 36.0 41.0 31.0 41.0 25 37.354195521487526 39.0 36.0 41.0 31.0 41.0 26 37.24926778983675 39.0 36.0 41.0 31.0 41.0 27 37.15471069454317 39.0 36.0 41.0 31.0 41.0 28 36.98595304572558 39.0 36.0 41.0 31.0 41.0 29 36.882268666779034 39.0 36.0 41.0 30.0 41.0 30 36.695758432935904 39.0 35.0 40.0 30.0 41.0 31 36.55315393878992 39.0 35.0 40.0 30.0 41.0 32 36.38539903316503 38.0 35.0 40.0 30.0 41.0 33 36.261223761960245 38.0 35.0 40.0 30.0 41.0 34 36.078785569291874 38.0 35.0 40.0 29.0 41.0 35 35.94561858629088 38.0 35.0 40.0 29.0 41.0 36 35.766153203526336 38.0 35.0 40.0 27.0 41.0 37 35.707979441932494 38.0 35.0 40.0 27.0 41.0 38 35.52841512835357 38.0 34.0 40.0 26.0 41.0 39 35.446441788376 38.0 34.0 40.0 26.0 41.0 40 35.30500370074528 38.0 34.0 40.0 25.0 41.0 41 35.18232826954128 38.0 34.0 40.0 24.0 41.0 42 34.95561181991172 38.0 34.0 40.0 24.0 41.0 43 34.60939793881923 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 2.0 16 5.0 17 32.0 18 55.0 19 130.0 20 259.0 21 501.0 22 1043.0 23 1811.0 24 2843.0 25 4429.0 26 6565.0 27 9131.0 28 12555.0 29 16227.0 30 20993.0 31 26593.0 32 32572.0 33 40359.0 34 50058.0 35 62195.0 36 80922.0 37 112279.0 38 154077.0 39 183115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.40266795643136 21.303712714685975 13.573674143882045 23.719945185000626 2 18.837159879524254 23.28868011637195 34.78944835689352 23.084711647210273 3 19.525522928742944 24.92335915305452 32.192087000490986 23.359030917711546 4 13.812573740097758 16.67594906406564 36.6311492829348 32.880327912901805 5 12.787723785166241 38.56347572042396 35.12972150365067 13.519078990759128 6 32.153491769200514 37.56977065150216 14.340571160568377 15.936166418728948 7 26.108941147157754 32.64228327434125 22.366058669637034 18.882716908863955 8 26.527259714151015 34.700532760755976 19.712025834377602 19.060181690715407 9 24.786443791419646 14.572997505966384 21.776137887570627 38.864420815043346 10 16.045723135398422 27.715406581219753 34.32654985502361 21.91232042835821 11 32.92026664907897 22.779736037930807 23.668159178458975 20.631838134531254 12 20.442892492738967 27.24750047022671 31.521922335646607 20.787684701387718 13 30.646201423138088 21.371742916675824 26.313764573974602 21.66829108621149 14 20.39391563277859 22.93900243540795 27.95528327189852 28.711798659914944 15 22.98211672859003 29.622572836285382 25.311876338924755 22.083434096199834 16 21.866763399018506 28.530547637019176 26.689213121401544 22.913475842560768 17 21.435131919966192 27.345454190147468 27.53293419024518 23.68647969964116 18 22.434088871626887 26.378497082151657 29.37524580032586 21.81216824589559 19 22.53937080002052 25.685614971041364 30.290172628164257 21.48484160077386 20 23.255581041436134 25.400669798254423 30.13518101896296 21.208568141346483 21 22.225723477381486 26.132879961502475 30.36504249139546 21.276354069720576 22 21.29039980262692 26.520420052909664 29.994235142668007 22.19494500179541 23 21.898274695451867 26.598465473145783 30.631789279808096 20.87147055159425 24 22.01992295610159 26.828449082386165 28.913080119303235 22.238547842209012 25 22.13216668254445 26.739533486248618 29.68535115553634 21.442948675670593 26 21.68343605038876 27.336049655940613 29.674358842827026 21.3061554508436 27 21.056385678726457 27.478461173930143 29.331032275872847 22.134120871470554 28 21.31104092315885 27.049638841459096 29.624893435635123 22.014426799746932 29 21.606123450999934 27.10521108904506 29.143796549390906 22.1448689105641 30 21.671833053640043 27.206340365970732 30.14995957271659 20.971867007672635 31 22.06792272159892 26.94423477625758 30.084616380500123 20.903226121643375 32 21.54493291025143 26.888906802287377 29.536466386729103 22.029693900732088 33 21.33473546388781 26.86618935602147 29.98947180716064 21.809603372930088 34 20.947195372480625 27.11889041152776 30.332309826883286 21.601604389108328 35 20.770951958707986 28.435891610911213 29.52144355935971 21.271712871021087 36 22.166975672790606 27.035470971744868 29.2747272074396 21.522826148024926 37 21.381391724498442 27.067104404986114 29.59912256917218 21.95238130134326 38 21.21394216089326 26.32231415052629 30.381286686843666 22.082457001736785 39 20.820783776323534 26.13910893870442 31.093100003175557 21.947007281796484 40 20.232695046375344 26.36897041113692 30.841009631708673 22.557324910779062 41 21.114278525662165 25.6580120524602 30.82696389880233 22.400745523075308 42 20.167718264582525 27.066493720946706 30.34183649789803 22.423951516572743 43 20.42725898133017 26.78789966216959 29.927548445564845 22.8572929109354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 363.0 1 331.5 2 300.0 3 501.0 4 702.0 5 702.0 6 1102.5 7 1503.0 8 1574.0 9 1645.0 10 2506.5 11 3368.0 12 3368.0 13 6011.0 14 8654.0 15 12781.0 16 16908.0 17 15869.5 18 14831.0 19 14831.0 20 16247.5 21 17664.0 22 14902.0 23 12140.0 24 13907.0 25 15674.0 26 15674.0 27 17687.5 28 19701.0 29 21488.5 30 23276.0 31 25768.0 32 28260.0 33 28260.0 34 31345.5 35 34431.0 36 37022.0 37 39613.0 38 42001.0 39 44389.0 40 44389.0 41 45287.0 42 46185.0 43 48428.5 44 50672.0 45 53006.0 46 55340.0 47 55340.0 48 66105.5 49 76871.0 50 72433.5 51 67996.0 52 62768.5 53 57541.0 54 57541.0 55 52168.0 56 46795.0 57 40957.0 58 35119.0 59 31568.5 60 28018.0 61 28018.0 62 24916.0 63 21814.0 64 18985.5 65 16157.0 66 13767.5 67 11378.0 68 11378.0 69 9651.5 70 7925.0 71 6686.0 72 5447.0 73 4443.5 74 3440.0 75 3440.0 76 2740.0 77 2040.0 78 1614.0 79 1188.0 80 942.0 81 696.0 82 696.0 83 512.5 84 329.0 85 253.5 86 178.0 87 143.5 88 109.0 89 109.0 90 84.5 91 60.0 92 39.5 93 19.0 94 16.0 95 13.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 818754.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.6779724069723 #Duplication Level Percentage of deduplicated Percentage of total 1 85.75804948253304 54.608987086245044 2 8.489987482843647 10.812503773361161 3 2.276554287898647 4.348990833833536 4 0.9787821585076226 2.493074531275407 5 0.5831373801698407 1.8566503001964618 6 0.3659554304859506 1.398197988279962 7 0.25514711264981627 1.1373075559323558 8 0.20072117526233937 1.0225213967880238 9 0.14740622842509535 0.844787677164217 >10 0.8476771978853379 9.858157712898207 >50 0.060989869503479656 2.6895425758435194 >100 0.03097482815872897 3.7538350963723306 >500 0.0026934633112491364 1.186388793490476 >1k 0.0013467316556245682 1.4440277477150187 >5k 5.771707095533864E-4 2.545026930604208 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7796 0.9521785542421777 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7316 0.8935528864591806 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5662 0.6915386062236032 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3258 0.3979217200770928 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1718 0.20983103593997707 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1529 0.186747179250422 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1416 0.17294571995984143 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1326 0.16195340725052948 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1277 0.1559687036643485 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1263 0.15425878835401108 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 903 0.11028953751676329 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 844 0.10308346585176989 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.2213680788124393E-4 0.0 0.0 0.0 0.0 9 1.2213680788124393E-4 0.0 0.0 2.4427361576248786E-4 0.0 10 1.2213680788124393E-4 0.0 0.0 6.106840394062197E-4 0.0 11 2.4427361576248786E-4 0.0 1.2213680788124393E-4 8.549576551687075E-4 0.0 12 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.0014656416945749273 0.0 13 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.0014656416945749273 0.0 14 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.0015877785024561713 0.0 15 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.002076325733981147 0.0 16 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.002076325733981147 0.0 17 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.0030534201970310983 0.0 18 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.0035419674285560743 0.0 19 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.005129745931012245 0.0 20 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.00683966124134966 0.0 21 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.01025949186202449 0.0 22 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.017343426719136638 0.0 23 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.021007530955573957 0.0 24 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.028091465812686105 0.0 25 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.03261052770429213 0.0 26 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.04128224106386045 0.0 27 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.08952628017695181 0.0 28 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.19102196752626552 0.0 29 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.312425954560222 0.0 30 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.47743278200778255 0.0 31 2.4427361576248786E-4 0.0 1.2213680788124393E-4 0.6916607430314844 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 40 0.0019307155 23.125 3 GTATTAG 120 0.0 23.124998 1 GGTATCA 2355 0.0 21.524416 1 CGATAAG 60 9.233724E-4 18.5 14 GAGCGTA 50 0.007033197 18.499998 6 GCGTATC 50 0.007033197 18.499998 8 TTATACC 145 1.546141E-10 17.862068 4 TAGAGCG 65 0.0015794095 17.076923 4 ATTATAC 135 2.2164386E-8 16.444445 3 CATAACA 115 1.241051E-6 16.086956 4 CTAATAC 185 1.8189894E-11 16.0 3 ACGCCTA 70 0.00259164 15.857142 6 GACCCGA 70 0.00259164 15.857142 6 GCGATAA 70 0.00259164 15.857142 13 AGTGTGC 85 5.3618115E-4 15.235293 8 ATTAGAG 135 3.9677798E-7 15.074075 3 TTAACGG 75 0.004103066 14.8 35 GTATTGG 215 1.2732926E-11 14.627907 1 GACCTAT 90 8.270432E-4 14.388888 6 GGCACCG 105 1.6547125E-4 14.095239 9 >>END_MODULE