##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088713_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2478681 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58828384935375 31.0 31.0 34.0 30.0 34.0 2 31.79293180526256 31.0 31.0 34.0 30.0 34.0 3 31.87684982456395 31.0 31.0 34.0 30.0 34.0 4 35.57935732754638 37.0 35.0 37.0 33.0 37.0 5 35.46768987215378 37.0 35.0 37.0 33.0 37.0 6 35.51836158021141 37.0 35.0 37.0 33.0 37.0 7 35.37464885558085 37.0 35.0 37.0 33.0 37.0 8 35.407192373685845 37.0 35.0 37.0 33.0 37.0 9 37.01099253998397 39.0 37.0 39.0 33.0 39.0 10 36.828213473214184 39.0 37.0 39.0 32.0 39.0 11 36.91877696242477 39.0 37.0 39.0 33.0 39.0 12 36.773583611606334 39.0 37.0 39.0 32.0 39.0 13 36.808416653857435 39.0 37.0 39.0 32.0 39.0 14 37.78915600676327 40.0 37.0 41.0 32.0 41.0 15 37.80219762042796 40.0 37.0 41.0 32.0 41.0 16 37.6945560965691 39.0 37.0 41.0 32.0 41.0 17 37.728932444312115 39.0 37.0 41.0 32.0 41.0 18 37.68377173182027 39.0 37.0 41.0 32.0 41.0 19 37.732540815054456 40.0 37.0 41.0 32.0 41.0 20 37.61588078498201 39.0 37.0 41.0 32.0 41.0 21 37.549629419840635 39.0 36.0 41.0 32.0 41.0 22 37.40733640190085 39.0 36.0 41.0 32.0 41.0 23 37.224403624346984 39.0 36.0 41.0 31.0 41.0 24 37.06440683573239 39.0 36.0 41.0 31.0 41.0 25 37.25039527071051 39.0 36.0 41.0 31.0 41.0 26 37.13066021807566 39.0 36.0 41.0 31.0 41.0 27 37.02115762375231 39.0 36.0 41.0 31.0 41.0 28 36.853847671402654 39.0 35.0 41.0 30.0 41.0 29 36.732686860471354 39.0 35.0 41.0 30.0 41.0 30 36.52793239630271 39.0 35.0 40.0 30.0 41.0 31 36.361512836867675 38.0 35.0 40.0 30.0 41.0 32 36.18591258818702 38.0 35.0 40.0 30.0 41.0 33 36.047829470593435 38.0 35.0 40.0 29.0 41.0 34 35.85447542463108 38.0 35.0 40.0 28.0 41.0 35 35.71103623257692 38.0 35.0 40.0 27.0 41.0 36 35.51132880753917 38.0 34.0 40.0 27.0 41.0 37 35.4406771181931 38.0 34.0 40.0 26.0 41.0 38 35.246011487561326 38.0 34.0 40.0 25.0 41.0 39 35.15097263423571 38.0 34.0 40.0 25.0 41.0 40 34.98291591374606 38.0 34.0 40.0 24.0 41.0 41 34.84047806071052 38.0 34.0 40.0 23.0 41.0 42 34.58080325786174 38.0 33.0 40.0 23.0 41.0 43 34.219563953570464 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 5.0 14 9.0 15 19.0 16 31.0 17 78.0 18 186.0 19 422.0 20 955.0 21 1865.0 22 3608.0 23 6121.0 24 9911.0 25 15150.0 26 21769.0 27 30528.0 28 41318.0 29 53778.0 30 67281.0 31 83380.0 32 102968.0 33 126418.0 34 155825.0 35 191487.0 36 247604.0 37 340559.0 38 455784.0 39 521619.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61483466408142 21.15193524297802 13.822754924897557 23.410475168043003 2 18.890853643530573 23.597873223702447 34.61970297912478 22.8915701536422 3 19.85842470249298 24.534702125848384 32.52419331087784 23.082679860780793 4 13.780676093454543 16.445762887600303 36.29063199338681 33.48292902555835 5 12.82081074571516 38.62183153056 34.74690773036143 13.810449993363406 6 32.37568690767388 37.271798993093505 13.889483963446688 16.463030135785928 7 26.073907856638268 33.00077742960873 21.72296475423824 19.20234995951476 8 27.12676621154558 34.36295352245811 19.252941382937134 19.257338883059173 9 24.7569170861438 14.418031202885729 21.799255329749975 39.025796381220495 10 16.200632513824893 27.84174324973645 33.68876430650011 22.268859929938543 11 33.00198775074324 22.64890076617362 23.562370470423584 20.786741012659558 12 20.81845142638363 27.17876967629154 31.305278896316224 20.6975000010086 13 31.572275738588385 20.990478403634835 26.202605337274136 21.234640520502637 14 20.41250971787011 22.953659627842388 28.06936431109933 28.564466343188172 15 22.835007812622923 29.597999903981194 25.38826093394027 22.178731349455617 16 21.65623571568911 28.48510962080236 26.693229181165307 23.16542548234323 17 21.548880231058373 27.035346621852508 27.20862426427604 24.207148882813076 18 22.83230476208919 25.94533140811585 29.47180375368997 21.750560076104993 19 22.600003792339553 25.176696799628512 30.680026998230108 21.543272409801826 20 23.562007374083233 24.918252893373534 30.29760586376383 21.2221338687794 21 22.389286882821953 25.749017320098876 30.83329399789646 21.02840179918271 22 21.277364856550722 26.017022763316454 30.47520031823377 22.23041206189905 23 22.12696994893655 26.213780635749416 31.05062732961603 20.608622085698 24 22.04575740081116 26.179730267831964 29.169949662744017 22.604562668612864 25 21.99895831694357 26.417840779027234 30.0538471872742 21.529353716755 26 21.695450120447124 27.08460669202693 29.97102087763613 21.248922309889817 27 20.801668306651806 27.115631257108113 29.89170449928813 22.19099593695195 28 21.311616944657256 26.770084573206475 29.85164286973596 22.066655612400304 29 21.391619171648145 26.699119410686574 29.41225595387224 22.49700546379304 30 21.536534955486406 27.02300134628054 30.64638007069082 20.79408362754223 31 22.216896809230395 26.661074983025244 30.417992472609424 20.704035735134937 32 21.777227485101953 26.64130640449497 29.587510454148795 21.993955656254276 33 21.476059242798893 26.550048190953174 30.072889573123767 21.901002993124166 34 20.718963029127185 26.9670038217907 30.745989500060716 21.568043649021394 35 20.45761435214939 28.591779256790208 29.757883325849516 21.19272306521089 36 22.215605800020253 26.698958034535302 29.629912037894346 21.455524127550095 37 21.49215651388783 27.172072566013938 29.60013813798549 21.735632782112745 38 21.19171446426547 26.050790722969193 30.767049087801134 21.990445724964207 39 20.792590898143004 25.683135506343895 31.483599543466866 22.04067405204623 40 19.91712527751655 26.180658180701755 31.224308412417734 22.677908129363963 41 21.100415906685853 25.357034648669995 31.133251919065017 22.409297525579127 42 19.943389246135343 26.90338127415347 30.75397761954846 22.399251860162725 43 20.171978564405826 26.804901477842446 30.135826272118116 22.887293685633608 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 921.0 1 813.5 2 706.0 3 1290.5 4 1875.0 5 1875.0 6 3085.5 7 4296.0 8 4686.0 9 5076.0 10 7710.5 11 10345.0 12 10345.0 13 19353.0 14 28361.0 15 44093.5 16 59826.0 17 55259.5 18 50693.0 19 50693.0 20 54087.5 21 57482.0 22 47271.5 23 37061.0 24 41866.0 25 46671.0 26 46671.0 27 51375.5 28 56080.0 29 61293.5 30 66507.0 31 72633.0 32 78759.0 33 78759.0 34 86896.0 35 95033.0 36 103141.5 37 111250.0 38 116448.5 39 121647.0 40 121647.0 41 126952.0 42 132257.0 43 138620.0 44 144983.0 45 154659.0 46 164335.0 47 164335.0 48 206540.5 49 248746.0 50 233473.0 51 218200.0 52 200217.5 53 182235.0 54 182235.0 55 164012.5 56 145790.0 57 126850.0 58 107910.0 59 97153.5 60 86397.0 61 86397.0 62 76201.5 63 66006.0 64 57579.0 65 49152.0 66 41899.0 67 34646.0 68 34646.0 69 29616.0 70 24586.0 71 20686.0 72 16786.0 73 13596.5 74 10407.0 75 10407.0 76 8299.0 77 6191.0 78 4893.0 79 3595.0 80 2744.0 81 1893.0 82 1893.0 83 1424.5 84 956.0 85 718.5 86 481.0 87 386.5 88 292.0 89 292.0 90 223.0 91 154.0 92 103.5 93 53.0 94 39.0 95 25.0 96 25.0 97 19.0 98 13.0 99 8.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2478681.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.385008750615846 #Duplication Level Percentage of deduplicated Percentage of total 1 79.32799617093335 41.555977735831625 2 11.691497461392045 12.249183936456502 3 3.8078520987271935 5.984230965386248 4 1.6558921499001227 3.4697569905037597 5 0.8787714199361925 2.3017224261574274 6 0.5330015383262134 1.6752774149586238 7 0.3606070496826025 1.3223282417209825 8 0.25815472019735286 1.081874982124089 9 0.19571859249937568 0.9227448162664209 >10 1.122439713156793 11.004348527963888 >50 0.1030616732785428 3.7042310396504385 >100 0.057206127844066965 5.536315478671863 >500 0.003553060097103161 1.3227970954833244 >1k 0.0036303005339965878 3.4352181148120624 >5k 3.0896174757417765E-4 0.9490862801803523 >10k+ 3.0896174757417765E-4 3.4849059538324187 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29207 1.178328312517827 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25002 1.008681633497816 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20830 0.8403663077257623 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11088 0.4473346913136463 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6732 0.2715960625832852 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5840 0.23560918085062174 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5596 0.22576523562330125 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5288 0.21333927197569996 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4924 0.19865404221035302 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4694 0.18937491351246893 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3202 0.1291816090896731 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3153 0.12720475123664562 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3008 0.12135486575319697 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2981 0.12026557673214101 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2835 0.11437534721087546 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2709 0.10929199844594766 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2588 0.1044103698701043 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2528 0.10198972760109105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 4.034403781688729E-5 0.0 0.0 0.0 0.0 3 4.034403781688729E-5 0.0 0.0 0.0 0.0 4 4.034403781688729E-5 0.0 0.0 0.0 0.0 5 4.034403781688729E-5 0.0 0.0 0.0 0.0 6 8.068807563377458E-5 0.0 0.0 0.0 4.034403781688729E-5 7 1.2103211345066186E-4 0.0 0.0 0.0 4.034403781688729E-5 8 1.2103211345066186E-4 0.0 0.0 0.0 4.034403781688729E-5 9 1.2103211345066186E-4 0.0 0.0 4.034403781688729E-5 4.034403781688729E-5 10 1.2103211345066186E-4 0.0 0.0 1.2103211345066186E-4 4.034403781688729E-5 11 1.2103211345066186E-4 0.0 0.0 4.8412845380264743E-4 4.034403781688729E-5 12 1.2103211345066186E-4 0.0 0.0 7.261926807039712E-4 4.034403781688729E-5 13 1.2103211345066186E-4 0.0 0.0 7.665367185208584E-4 4.034403781688729E-5 14 1.2103211345066186E-4 0.0 0.0 8.068807563377457E-4 4.034403781688729E-5 15 1.2103211345066186E-4 0.0 0.0 0.0010892890210559567 4.034403781688729E-5 16 1.2103211345066186E-4 0.0 0.0 0.0013313532479572805 4.034403781688729E-5 17 1.2103211345066186E-4 0.0 0.0 0.002501330344647012 4.034403781688729E-5 18 1.2103211345066186E-4 0.0 0.0 0.0030661468740834337 4.034403781688729E-5 19 1.2103211345066186E-4 0.0 0.0 0.004195779932956278 4.034403781688729E-5 20 1.2103211345066186E-4 0.0 0.0 0.007705711223025472 4.034403781688729E-5 21 1.2103211345066186E-4 0.0 0.0 0.012385619609784397 4.034403781688729E-5 22 1.2103211345066186E-4 0.0 0.0 0.020938555626964502 4.034403781688729E-5 23 1.2103211345066186E-4 0.0 0.0 0.025779840164990978 4.034403781688729E-5 24 1.2103211345066186E-4 0.0 0.0 0.032638326593861816 4.034403781688729E-5 25 1.2103211345066186E-4 0.0 0.0 0.03784270747224028 4.034403781688729E-5 26 1.2103211345066186E-4 0.0 0.0 0.048130437115546536 4.034403781688729E-5 27 1.2103211345066186E-4 0.0 0.0 0.10255454413052749 4.034403781688729E-5 28 1.2103211345066186E-4 0.0 0.0 0.21664748307668474 4.034403781688729E-5 29 1.2103211345066186E-4 0.0 0.0 0.3588602163812124 4.034403781688729E-5 30 1.2103211345066186E-4 0.0 0.0 0.5564653136083264 4.034403781688729E-5 31 1.2103211345066186E-4 0.0 0.0 0.8101082793630967 4.034403781688729E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8365 0.0 22.11596 1 ACGTATA 100 2.8782597E-7 18.5 29 GTATTGG 755 0.0 18.377483 1 TTAGTAC 195 0.0 17.076923 3 TTGGACC 1145 0.0 16.965065 4 GGACCCT 1180 0.0 16.775423 6 TGGACCC 1215 0.0 16.444445 5 ATTGGAC 880 0.0 16.1875 3 CGCGATA 70 0.0025936286 15.857142 14 GACCCTC 1255 0.0 14.888447 7 ACCGTTA 125 2.961904E-6 14.799999 8 ACGTTTA 190 4.5656634E-10 14.605264 26 TATACTG 395 0.0 14.518987 5 GACGTAT 115 2.211773E-5 14.478261 28 GTATCAA 12840 0.0 14.364876 2 CCCTCGC 1325 0.0 13.822642 9 AGCCGTC 210 2.044544E-9 13.214285 12 TATTGGA 1065 0.0 13.201878 2 TACTATA 495 0.0 13.080809 2 ACCCTCG 1375 0.0 13.05091 8 >>END_MODULE