##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088711_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3773803 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.562468417137833 31.0 31.0 34.0 30.0 34.0 2 31.75371925879544 31.0 31.0 34.0 30.0 34.0 3 31.804907410376217 31.0 31.0 34.0 30.0 34.0 4 35.510093399152 37.0 35.0 37.0 33.0 37.0 5 35.434321558385534 37.0 35.0 37.0 33.0 37.0 6 35.51340093799279 37.0 35.0 37.0 33.0 37.0 7 35.3437876857907 37.0 35.0 37.0 33.0 37.0 8 35.410521428914016 37.0 35.0 37.0 33.0 37.0 9 36.968874103921166 39.0 37.0 39.0 33.0 39.0 10 36.822366456330656 39.0 37.0 39.0 32.0 39.0 11 36.91167583469513 39.0 37.0 39.0 33.0 39.0 12 36.762298667948485 39.0 37.0 39.0 32.0 39.0 13 36.803734323174794 39.0 37.0 39.0 32.0 39.0 14 37.69745320569198 39.0 37.0 41.0 32.0 41.0 15 37.71169030285895 39.0 37.0 41.0 32.0 41.0 16 37.587144056009286 39.0 36.0 41.0 32.0 41.0 17 37.709961807757324 39.0 37.0 41.0 32.0 41.0 18 37.702253933233926 39.0 37.0 41.0 32.0 41.0 19 37.77676179705194 40.0 37.0 41.0 32.0 41.0 20 37.663422017524496 39.0 37.0 41.0 32.0 41.0 21 37.609580309306025 39.0 37.0 41.0 32.0 41.0 22 37.48932363454054 39.0 36.0 41.0 32.0 41.0 23 37.2930584876847 39.0 36.0 41.0 31.0 41.0 24 37.118305327543595 39.0 36.0 41.0 31.0 41.0 25 37.270423495874056 39.0 36.0 41.0 31.0 41.0 26 37.13139106625333 39.0 36.0 41.0 31.0 41.0 27 37.02091285634147 39.0 35.0 41.0 31.0 41.0 28 36.830051277186435 39.0 35.0 41.0 30.0 41.0 29 36.68632649876 39.0 35.0 40.0 30.0 41.0 30 36.41654320588542 38.0 35.0 40.0 30.0 41.0 31 36.16379047872928 38.0 35.0 40.0 30.0 41.0 32 35.98566167868328 38.0 35.0 40.0 30.0 41.0 33 35.803346385595646 38.0 35.0 40.0 29.0 41.0 34 35.591636606362336 38.0 34.0 40.0 28.0 41.0 35 35.40522597496478 38.0 34.0 40.0 27.0 41.0 36 35.174231935265304 38.0 34.0 40.0 25.0 41.0 37 35.020232110685164 38.0 34.0 40.0 25.0 41.0 38 34.784399185649065 38.0 33.0 40.0 24.0 41.0 39 34.64176958892661 38.0 33.0 40.0 23.0 41.0 40 34.38682914820938 38.0 33.0 40.0 22.0 41.0 41 34.16737492656612 38.0 33.0 40.0 21.0 41.0 42 33.80694885239107 38.0 33.0 40.0 18.0 41.0 43 33.417571611448714 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 4.0 14 8.0 15 19.0 16 38.0 17 90.0 18 247.0 19 590.0 20 1326.0 21 2729.0 22 5439.0 23 9573.0 24 15810.0 25 24339.0 26 35990.0 27 50825.0 28 68570.0 29 88556.0 30 110148.0 31 133819.0 32 163692.0 33 200779.0 34 245126.0 35 296979.0 36 383268.0 37 538981.0 38 656818.0 39 740036.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.662349624503456 21.33431448329444 15.091063311995883 21.912272580206228 2 18.853050887923935 24.211332706026255 35.226772568679394 21.70884383737042 3 19.79162664293817 24.264753618564615 34.47244066529175 21.471179073205466 4 13.034358179269029 16.15579827563866 36.04401183633592 34.765831708756394 5 11.665526790879122 39.314982790569616 34.917535441039185 14.101954977512074 6 31.493164852537348 37.07514674189405 12.4721136741902 18.9595747313784 7 24.771536829028967 34.625336828657986 20.714780289273182 19.888346053039864 8 27.7464403944774 33.91594632788198 18.36486960236133 19.972743675279286 9 23.74005744338006 14.382944737708883 22.803548568910458 39.0734492500006 10 16.503325690291728 28.080745073338488 32.81620688732295 22.599722349046836 11 31.699269940693775 22.274374152545853 24.54380899055939 21.482546916200977 12 21.547415167140414 28.211329526210033 30.95209262380681 19.289162682842743 13 32.998887329306804 20.82159561588138 27.122984427115032 19.056532627696782 14 19.82109293993354 23.930634428983176 29.165115402155333 27.083157228927956 15 21.648771809233285 29.783165681939412 27.44046257846528 21.127599930362027 16 20.41510910876906 28.84925365738487 28.09105297759316 22.64458425625291 17 20.99386215973648 26.70815090241859 27.36536591867673 24.932621019168195 18 23.183245124348037 24.67216757207517 31.316367070565153 20.82822023301163 19 22.2918366433012 23.67744156226491 33.3000424240481 20.730679370385786 20 23.753359674577606 22.837493107085876 33.10686858852993 20.30227862980659 21 21.781741124271722 24.36208249344229 34.49228801821398 19.363888364072 22 19.499799009116266 24.733988499134693 33.83303261987973 21.933179871869303 23 21.512781668783454 24.87485435779239 35.016030248531784 18.596333724892368 24 20.978731534210983 24.97904633601701 31.60432592798299 22.437896201789016 25 20.940388250261076 25.716445718019727 33.103238298342546 20.23992773337665 26 20.526853150522165 26.75147589845045 32.84866751126118 19.873003439766197 27 18.72257242892647 26.959753861025604 32.440935576128375 21.87673813391955 28 19.82302732813557 25.993222221721695 32.43841822161888 21.745332228523854 29 20.103275131213792 25.838153183936736 31.430654965296277 22.62791671955319 30 20.477301014387876 26.19890333438179 34.07435417270059 19.24944147852975 31 21.728293713264843 25.996110554790487 33.307700481450674 18.967895250494 32 21.189579848232672 25.79278780582876 31.875193273204776 21.14243907273379 33 20.33977396276382 25.77630575840869 32.90161145136617 20.982308827461317 34 18.960740663993324 26.931241508896992 33.734325824638965 20.373692002470715 35 18.42038389391285 29.961394381211736 31.813080862991523 19.80514086188389 36 21.88590660402782 26.50209881119921 31.525360491790376 20.086634092982596 37 20.69453545932313 27.87758131518789 31.288384687806968 20.139498537682016 38 20.42660944410718 25.602926278875714 33.06865779692263 20.901806480094486 39 19.801643064039116 25.310489180277823 33.94416719685685 20.943700558826205 40 18.10502562004429 26.110928418892033 33.34347341395404 22.44057254710964 41 20.581228007927283 25.010844498242225 33.23843348473675 21.169494009093746 42 18.855250260811175 27.834892282400535 32.242250059157826 21.067607397630454 43 19.36656470939262 28.00880173130394 30.851689926580693 21.772943632722747 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 799.0 1 881.5 2 964.0 3 2109.5 4 3255.0 5 3255.0 6 5470.0 7 7685.0 8 8576.0 9 9467.0 10 15428.0 11 21389.0 12 21389.0 13 41768.5 14 62148.0 15 100049.0 16 137950.0 17 126229.5 18 114509.0 19 114509.0 20 119545.0 21 124581.0 22 93449.5 23 62318.0 24 66478.0 25 70638.0 26 70638.0 27 74824.5 28 79011.0 29 82187.0 30 85363.0 31 91893.5 32 98424.0 33 98424.0 34 110029.5 35 121635.0 36 134336.0 37 147037.0 38 154583.5 39 162130.0 40 162130.0 41 167527.0 42 172924.0 43 184481.5 44 196039.0 45 222731.5 46 249424.0 47 249424.0 48 371634.0 49 493844.0 50 446294.5 51 398745.0 52 348918.0 53 299091.0 54 299091.0 55 254704.5 56 210318.0 57 168727.5 58 127137.0 59 110684.5 60 94232.0 61 94232.0 62 82266.0 63 70300.0 64 60859.0 65 51418.0 66 43625.0 67 35832.0 68 35832.0 69 30480.0 70 25128.0 71 20939.0 72 16750.0 73 13501.0 74 10252.0 75 10252.0 76 8123.5 77 5995.0 78 4679.0 79 3363.0 80 2574.0 81 1785.0 82 1785.0 83 1369.5 84 954.0 85 726.5 86 499.0 87 367.0 88 235.0 89 235.0 90 195.5 91 156.0 92 102.5 93 49.0 94 35.5 95 22.0 96 22.0 97 14.5 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3773803.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.02007604491302 #Duplication Level Percentage of deduplicated Percentage of total 1 75.65706339410787 28.764873035787865 2 12.706954476397861 9.66238750983789 3 4.657235371322323 5.312053289302003 4 2.1629417593386187 3.289408406830889 5 1.1386655762645301 2.164607589965107 6 0.7105855925026676 1.62099109580226 7 0.4578924460520652 1.2186373933503525 8 0.3412759179978326 1.0380269083660074 9 0.2534317052749255 0.8671943436070186 >10 1.5852335551281866 11.724529015712609 >50 0.18799906837292255 4.98067201594816 >100 0.12058169047952294 8.72987532439064 >500 0.010349437918914786 2.691899067839067 >1k 0.007971864342640729 6.43719849467123 >5k 0.001048929518768517 2.7018425758572207 >10k+ 7.692149804302458E-4 8.795803932731724 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 71209 1.8869294449127314 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 65258 1.7292370587441899 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 53792 1.4254056186822683 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26239 0.6952933155228294 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 20547 0.5444640327012301 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 19601 0.5193964814803528 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 18182 0.48179515464903705 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 16550 0.43854965402274576 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 16032 0.4248234473288617 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13151 0.34848135951982656 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 10271 0.2721657701793125 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 9316 0.2468597327417462 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 9161 0.24275247012098936 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 9018 0.23896318912248465 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7450 0.19741359048153811 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7274 0.19274986002184002 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 6672 0.17679778197219093 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 6357 0.1684507643880722 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6260 0.16588041294153405 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6231 0.1651119573544247 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6097 0.16156116257260913 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5991 0.15875232490938188 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5720 0.15157123994018765 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 5619 0.14889489461956545 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 5416 0.14351570550980006 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5041 0.13357877981442062 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4954 0.1312734130530926 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4714 0.12491378060804975 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4674 0.12385384186720928 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4559 0.12080651798729292 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 4419 0.11709673239435126 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4418 0.11707023392583024 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 4120 0.10917369030656873 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 4109 0.1088822071528376 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 4018 0.10647084651742551 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 3875 0.10268156551892084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.649846852101183E-5 0.0 0.0 0.0 0.0 2 2.649846852101183E-5 0.0 0.0 0.0 0.0 3 2.649846852101183E-5 0.0 0.0 0.0 0.0 4 2.649846852101183E-5 0.0 0.0 0.0 0.0 5 2.649846852101183E-5 0.0 0.0 0.0 0.0 6 1.3249234260505913E-4 0.0 0.0 0.0 0.0 7 1.3249234260505913E-4 0.0 0.0 0.0 0.0 8 1.3249234260505913E-4 0.0 0.0 0.0 0.0 9 1.3249234260505913E-4 0.0 0.0 1.0599387408404732E-4 0.0 10 2.1198774816809463E-4 0.0 0.0 3.1798162225214196E-4 0.0 11 2.9148315373113014E-4 0.0 0.0 5.034709018992247E-4 0.0 12 2.9148315373113014E-4 0.0 0.0 8.479509926723785E-4 0.0 13 2.9148315373113014E-4 0.0 0.0 0.0010334402723194613 0.0 14 3.1798162225214196E-4 0.0 0.0 0.0011394341464035086 0.0 15 3.1798162225214196E-4 0.0 0.0 0.0017753973909077924 0.0 16 3.1798162225214196E-4 0.0 0.0 0.002490856040975112 0.0 17 3.1798162225214196E-4 0.0 0.0 0.0036832871244206443 0.0 18 3.1798162225214196E-4 0.0 0.0 0.004663730459698082 0.0 19 3.1798162225214196E-4 0.0 0.0 0.006200641633916768 0.0 20 3.1798162225214196E-4 0.0 0.0 0.010864372093614849 0.0 21 3.444800907731538E-4 0.0 0.0 0.021066282474204404 0.0 22 3.9747702781517744E-4 0.0 0.0 0.03362655655316401 0.0 23 3.9747702781517744E-4 0.0 0.0 0.04022467521489596 0.0 24 4.2397549633618926E-4 0.0 0.0 0.05111554577703182 0.0 25 4.2397549633618926E-4 0.0 0.0 0.05678621804052835 0.0 26 4.2397549633618926E-4 0.0 0.0 0.06735910698041207 0.0 27 4.2397549633618926E-4 0.0 0.0 0.12162797051144429 0.0 28 4.2397549633618926E-4 0.0 0.0 0.2446338613859812 0.0 29 4.2397549633618926E-4 0.0 0.0 0.4129521334314483 0.0 30 4.2397549633618926E-4 0.0 0.0 0.672080657098423 0.0 31 4.2397549633618926E-4 0.0 0.0 0.9397151891606425 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 19685 0.0 25.318262 1 GTATTGG 1465 0.0 22.982935 1 ATTGGAC 1615 0.0 20.275541 3 TTGGACC 2530 0.0 19.37747 4 GGACCCT 2430 0.0 19.109055 6 TGGACCC 2490 0.0 18.574297 5 ACCGTTA 205 0.0 18.04878 8 TGCGACG 170 5.456968E-12 17.411764 22 TAATACT 745 0.0 17.134228 4 TCACGTT 195 0.0 17.076923 24 CCGTTTA 175 7.2759576E-12 16.914286 27 GACCCTC 2720 0.0 16.731617 7 TATTGGA 1955 0.0 16.276217 2 TTTTTAC 3175 0.0 16.256695 1 GTATCAA 30905 0.0 16.120531 2 CTAATAC 805 0.0 16.086956 3 AATACTG 750 0.0 16.033333 5 ACGTTTA 200 3.6379788E-12 15.725 26 GATACTG 1840 0.0 15.182066 36 CGTTTAC 185 3.0559022E-10 15.0 28 >>END_MODULE