##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088710_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3090822 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.623597864904546 31.0 31.0 34.0 30.0 34.0 2 31.82025364126436 31.0 31.0 34.0 30.0 34.0 3 31.893608884626808 31.0 31.0 34.0 30.0 34.0 4 35.59186617669992 37.0 35.0 37.0 33.0 37.0 5 35.49130231375343 37.0 35.0 37.0 33.0 37.0 6 35.55353106714007 37.0 35.0 37.0 33.0 37.0 7 35.41302863768926 37.0 35.0 37.0 33.0 37.0 8 35.45874560230256 37.0 35.0 37.0 33.0 37.0 9 37.05521540871651 39.0 37.0 39.0 33.0 39.0 10 36.890624241706576 39.0 37.0 39.0 33.0 39.0 11 36.97626036051251 39.0 37.0 39.0 33.0 39.0 12 36.84429320096725 39.0 37.0 39.0 32.0 39.0 13 36.882490159575674 39.0 37.0 39.0 33.0 39.0 14 37.86072669341683 40.0 37.0 41.0 32.0 41.0 15 37.87520989562 40.0 37.0 41.0 33.0 41.0 16 37.755929328832266 40.0 37.0 41.0 32.0 41.0 17 37.81711855292864 40.0 37.0 41.0 32.0 41.0 18 37.781173422474666 40.0 37.0 41.0 32.0 41.0 19 37.838864224468445 40.0 37.0 41.0 32.0 41.0 20 37.728939097754576 40.0 37.0 41.0 32.0 41.0 21 37.674191525749464 40.0 37.0 41.0 32.0 41.0 22 37.542892796802924 39.0 36.0 41.0 32.0 41.0 23 37.36765203560736 39.0 36.0 41.0 31.0 41.0 24 37.212896439846745 39.0 36.0 41.0 31.0 41.0 25 37.375796147432624 39.0 36.0 41.0 31.0 41.0 26 37.26557595358128 39.0 36.0 41.0 31.0 41.0 27 37.1518812794784 39.0 36.0 41.0 31.0 41.0 28 36.98267192352067 39.0 35.0 41.0 31.0 41.0 29 36.84898515669941 39.0 35.0 41.0 30.0 41.0 30 36.6388892663505 39.0 35.0 40.0 30.0 41.0 31 36.45646044967973 39.0 35.0 40.0 30.0 41.0 32 36.280364252616295 38.0 35.0 40.0 30.0 41.0 33 36.125691482718835 38.0 35.0 40.0 30.0 41.0 34 35.9296827834149 38.0 35.0 40.0 29.0 41.0 35 35.76497870145871 38.0 35.0 40.0 28.0 41.0 36 35.543925531784105 38.0 35.0 40.0 27.0 41.0 37 35.446319781598554 38.0 34.0 40.0 26.0 41.0 38 35.23963172256442 38.0 34.0 40.0 25.0 41.0 39 35.120187445281545 38.0 34.0 40.0 25.0 41.0 40 34.92637557258231 38.0 34.0 40.0 24.0 41.0 41 34.75233352163276 38.0 34.0 40.0 23.0 41.0 42 34.46554088200485 38.0 33.0 40.0 21.0 41.0 43 34.08432999376865 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 5.0 13 4.0 14 5.0 15 16.0 16 37.0 17 105.0 18 195.0 19 506.0 20 1131.0 21 2192.0 22 4053.0 23 7146.0 24 11638.0 25 17772.0 26 26425.0 27 36658.0 28 50081.0 29 65189.0 30 82047.0 31 101497.0 32 125698.0 33 155320.0 34 192770.0 35 237177.0 36 308111.0 37 433945.0 38 566908.0 39 664188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.58427758052712 21.386026112147512 14.41072957290973 22.618966734415636 2 18.894488262345746 24.083140342601418 34.75230860916611 22.270062785886733 3 20.0261936792219 24.415187933824722 33.274772859776455 22.28384552717691 4 13.744434328473137 16.537477732460815 36.06791332532252 33.65017461374353 5 12.571930703223932 38.91424352486167 34.573230033952136 13.940595737962264 6 32.024846464791565 37.17606513736476 13.506730571996705 17.292357825846974 7 25.382082824568997 33.820032340911254 21.419544703641943 19.378340130877806 8 27.28833947732998 34.23228513321052 19.05654871099015 19.422826678469352 9 24.420299842566152 14.55467186398958 22.240944318372264 38.784083975072 10 16.47141116505577 28.040501847081455 33.248857423688584 22.239229564174188 11 32.41263974437868 22.731590495991032 23.783673081141522 21.072096678488762 12 20.944007775277903 27.751840772454706 31.036112723411442 20.26803872885595 13 31.66345392908424 21.10733002418127 26.660771794687626 20.568444252046866 14 20.11109018895297 23.7064444345226 28.413994723733687 27.768470652790743 15 22.449270776511877 29.87350937711716 26.0446573759343 21.632562470436667 16 21.090344251464497 28.7707283046387 27.289795400705703 22.8491320431911 17 21.22153912454357 27.22291998698081 27.59411574008468 23.961425148390948 18 22.578653833834494 25.817695098585425 30.212415985132758 21.391235082447324 19 22.25469470580965 25.070482868311405 31.708652261437248 20.966170164441692 20 23.29367398057863 24.623902638197865 31.30963219493067 20.77279118629284 21 21.832282803733115 25.827336546717994 31.992880858231242 20.34749979131765 22 20.575465038103133 26.074617043621405 31.547271243701513 21.802646674573946 23 21.59597026292682 26.22347712032592 32.25653240464834 19.924020212098917 24 21.52993604937457 26.218365211584494 30.107427732816706 22.144271006224233 25 21.446042509080108 26.675881043942358 31.07901393221609 20.799062514761445 26 21.120206857593224 27.373138925502666 30.935039287283452 20.57161492962066 27 19.97588343812746 27.448393987101166 30.78640568754849 21.78931688722288 28 20.511986778921596 26.97178938159493 30.816688893763537 21.699534945719943 29 20.63473729642147 26.889610595498542 30.354222921928216 22.121429186151776 30 20.896641734787703 27.18788076440507 31.90821082546973 20.007266675337497 31 21.56565470285898 26.998675433266623 31.383819579386973 20.051850284487426 32 21.232118834407157 26.83684146159177 30.534692712812323 21.396346991188754 33 20.6703588883475 26.70787900435548 31.18891997015681 21.432842137140216 34 19.89363994432549 27.221334648193913 31.831823379023444 21.053202028457154 35 19.599446360870992 29.143735873499022 30.67527020320161 20.581547562428376 36 21.658186721849397 26.863759867116254 30.608103604801574 20.869949806232775 37 20.81135697882311 27.423093274216377 30.648448859235504 21.117100887725012 38 20.498689345423323 26.07490822829655 31.931343830217333 21.495058596062794 39 20.00710490607353 25.82439234611375 32.707998066533754 21.460504681278962 40 18.975308186624787 26.365542887943725 32.35631168666458 22.302837238766905 41 20.332455249768508 25.477106090224545 32.35071447013125 21.839724189875703 42 19.12190349363373 27.36935352472579 31.621685105127373 21.887057876513108 43 19.359607250110162 27.356250214344275 30.848622146471065 22.435520389074494 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1196.0 1 1095.0 2 994.0 3 1934.0 4 2874.0 5 2874.0 6 4566.5 7 6259.0 8 6927.0 9 7595.0 10 11780.5 11 15966.0 12 15966.0 13 29671.5 14 43377.0 15 67406.5 16 91436.0 17 84010.5 18 76585.0 19 76585.0 20 81880.5 21 87176.0 22 69731.0 23 52286.0 24 58007.5 25 63729.0 26 63729.0 27 68120.0 28 72511.0 29 76514.5 30 80518.0 31 87037.5 32 93557.0 33 93557.0 34 102969.0 35 112381.0 36 122517.0 37 132653.0 38 139399.5 39 146146.0 40 146146.0 41 150742.0 42 155338.0 43 165465.5 44 175593.0 45 191459.5 46 207326.0 47 207326.0 48 270439.5 49 333553.0 50 307297.5 51 281042.0 52 252826.5 53 224611.0 54 224611.0 55 198293.0 56 171975.0 57 147062.0 58 122149.0 59 109236.5 60 96324.0 61 96324.0 62 84311.0 63 72298.0 64 62732.0 65 53166.0 66 45354.0 67 37542.0 68 37542.0 69 32251.5 70 26961.0 71 22815.5 72 18670.0 73 15247.5 74 11825.0 75 11825.0 76 9381.5 77 6938.0 78 5400.5 79 3863.0 80 2973.5 81 2084.0 82 2084.0 83 1574.0 84 1064.0 85 822.0 86 580.0 87 440.5 88 301.0 89 301.0 90 271.5 91 242.0 92 161.5 93 81.0 94 59.0 95 37.0 96 37.0 97 24.0 98 11.0 99 10.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3090822.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.31271934821234 #Duplication Level Percentage of deduplicated Percentage of total 1 77.27818617436178 35.016847618577586 2 12.50398970353672 11.331795523385924 3 4.139460488688957 5.627106341309298 4 1.931852989838256 3.5015004940218315 5 0.9478089072895947 2.14738995058746 6 0.5999377662842686 1.631088697801948 7 0.4010440778479854 1.2720678422051868 8 0.3009806502846109 1.0910601388471215 9 0.22141025090164765 0.9029430503931273 >10 1.425905691088703 12.324155526038062 >50 0.1442557293224893 4.5397038796863765 >100 0.09251114571969281 7.949809340569043 >500 0.006721491155603441 2.0190659439465874 >1k 0.00514837620425484 4.620279971231966 >5k 5.005365754136651E-4 1.7377607922823342 >10k+ 2.8602090023638E-4 4.287424889116171 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 44414 1.4369640179861538 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39591 1.2809213859614044 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31541 1.020472870970894 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16778 0.542832942175253 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9592 0.3103381559986308 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9001 0.2912170289974641 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8143 0.2634574233003389 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7735 0.2502570513604471 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7488 0.24226564972036563 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6631 0.21453839787603426 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 5043 0.1631604796393969 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4900 0.15853387868987603 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4797 0.15520143185210925 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4328 0.14002747489179254 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4240 0.13718033584593353 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4129 0.13358905818581596 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4033 0.13048308831760613 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3598 0.11640916235228041 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3572 0.11556796217964023 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.235385279385225E-5 0.0 5 0.0 0.0 0.0 3.235385279385225E-5 0.0 6 0.0 0.0 0.0 3.235385279385225E-5 0.0 7 0.0 0.0 0.0 3.235385279385225E-5 0.0 8 6.47077055877045E-5 0.0 0.0 6.47077055877045E-5 0.0 9 6.47077055877045E-5 0.0 0.0 1.29415411175409E-4 0.0 10 6.47077055877045E-5 0.0 0.0 2.2647696955696575E-4 0.0 11 6.47077055877045E-5 0.0 0.0 6.47077055877045E-4 0.0 12 6.47077055877045E-5 0.0 0.0 9.05907878227863E-4 0.0 13 6.47077055877045E-5 0.0 0.0 0.001164738700578681 0.0 14 6.47077055877045E-5 0.0 0.0 0.0013588618173417946 0.0 15 6.47077055877045E-5 0.0 0.0 0.0017471080508680214 0.0 16 9.706155838155676E-5 0.0 0.0 0.0026530159290958843 0.0 17 9.706155838155676E-5 0.0 0.0 0.00388246233526227 0.0 18 9.706155838155676E-5 0.0 0.0 0.004497185538345463 0.0 19 9.706155838155676E-5 0.0 0.0 0.005500154974954883 0.0 20 9.706155838155676E-5 0.0 0.0 0.008670832548752403 0.0 21 9.706155838155676E-5 0.0 0.0 0.01481806457958433 0.0 22 9.706155838155676E-5 0.0 0.0 0.023359481717161325 0.0 23 1.29415411175409E-4 0.0 3.235385279385225E-5 0.0294743598951994 0.0 24 1.29415411175409E-4 0.0 3.235385279385225E-5 0.03765988465204402 0.0 25 1.29415411175409E-4 0.0 3.235385279385225E-5 0.044324778327577585 0.0 26 1.29415411175409E-4 0.0 3.235385279385225E-5 0.056748657800416845 0.0 27 1.6176926396926125E-4 0.0 3.235385279385225E-5 0.1250799949010328 0.0 28 1.6176926396926125E-4 0.0 3.235385279385225E-5 0.26394273109224664 0.0 29 1.6176926396926125E-4 0.0 3.235385279385225E-5 0.4461919838800164 0.0 30 1.6176926396926125E-4 0.0 3.235385279385225E-5 0.7077081760127242 0.0 31 1.941231167631135E-4 0.0 3.235385279385225E-5 1.020666994087657 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12640 0.0 22.495647 1 GTATTGG 1020 0.0 21.583336 1 TTAACGG 240 0.0 18.5 35 ATTGGAC 1170 0.0 16.918804 3 TTGGACC 1600 0.0 16.88125 4 GGACCCT 1530 0.0 16.80719 6 TGGACCC 1670 0.0 15.508982 5 TATTGGA 1455 0.0 14.876288 2 ATACGAC 100 1.0943133E-4 14.8 19 GACCCTC 1720 0.0 14.735465 7 GTATTAG 560 0.0 14.535715 1 GTATCAA 19680 0.0 14.467225 2 CCGTTTA 185 4.9076334E-9 14.0 27 CGTTTAG 160 1.7863022E-7 13.875 26 CGTTTAC 215 1.9826984E-10 13.767442 28 TATACCG 205 1.4260877E-9 13.536585 5 TACGTTA 205 1.4260877E-9 13.536585 19 GAACCGT 110 2.4584652E-4 13.454545 6 TGTTACG 125 4.849559E-5 13.32 16 TAACGGC 335 0.0 13.253732 36 >>END_MODULE