##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088707_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1664417 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.579988668705017 31.0 31.0 34.0 30.0 34.0 2 31.78960080316411 31.0 31.0 34.0 30.0 34.0 3 31.868701172843103 31.0 31.0 34.0 30.0 34.0 4 35.57917997713314 37.0 35.0 37.0 33.0 37.0 5 35.46401292464569 37.0 35.0 37.0 33.0 37.0 6 35.5110317907111 37.0 35.0 37.0 33.0 37.0 7 35.38148072267947 37.0 35.0 37.0 33.0 37.0 8 35.40744897462595 37.0 35.0 37.0 33.0 37.0 9 37.00757262152453 39.0 37.0 39.0 33.0 39.0 10 36.823343549122605 39.0 37.0 39.0 32.0 39.0 11 36.913518667497385 39.0 37.0 39.0 33.0 39.0 12 36.769624439067854 39.0 37.0 39.0 32.0 39.0 13 36.80229593905854 39.0 37.0 39.0 32.0 39.0 14 37.79692288651221 40.0 37.0 41.0 32.0 41.0 15 37.80474003810343 40.0 37.0 41.0 32.0 41.0 16 37.70395820278212 39.0 37.0 41.0 32.0 41.0 17 37.733080712345526 39.0 37.0 41.0 32.0 41.0 18 37.687093438723586 39.0 37.0 41.0 32.0 41.0 19 37.739282884036875 40.0 37.0 41.0 32.0 41.0 20 37.61801760015669 39.0 37.0 41.0 32.0 41.0 21 37.547814640201345 39.0 36.0 41.0 32.0 41.0 22 37.41792050910319 39.0 36.0 41.0 32.0 41.0 23 37.247258349319914 39.0 36.0 41.0 31.0 41.0 24 37.0879701420978 39.0 36.0 41.0 31.0 41.0 25 37.269717264363436 39.0 36.0 41.0 31.0 41.0 26 37.164051436629165 39.0 36.0 41.0 31.0 41.0 27 37.05938115267989 39.0 36.0 41.0 31.0 41.0 28 36.89920795089211 39.0 36.0 41.0 30.0 41.0 29 36.786384061205815 39.0 35.0 41.0 30.0 41.0 30 36.58561946915947 39.0 35.0 40.0 30.0 41.0 31 36.434714377466705 39.0 35.0 40.0 30.0 41.0 32 36.26617488285688 38.0 35.0 40.0 30.0 41.0 33 36.12806225843644 38.0 35.0 40.0 30.0 41.0 34 35.951811955777906 38.0 35.0 40.0 29.0 41.0 35 35.81764726027191 38.0 35.0 40.0 28.0 41.0 36 35.62694024394127 38.0 35.0 40.0 27.0 41.0 37 35.56731095632885 38.0 35.0 40.0 27.0 41.0 38 35.3900206498732 38.0 34.0 40.0 26.0 41.0 39 35.29984192663257 38.0 34.0 40.0 25.0 41.0 40 35.13628015094775 38.0 34.0 40.0 24.0 41.0 41 35.01807239411758 38.0 34.0 40.0 24.0 41.0 42 34.75665052688118 38.0 33.0 40.0 23.0 41.0 43 34.40715698049227 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 14.0 16 26.0 17 55.0 18 116.0 19 265.0 20 567.0 21 1157.0 22 2162.0 23 3917.0 24 6209.0 25 9804.0 26 14119.0 27 19713.0 28 27204.0 29 35110.0 30 44227.0 31 55223.0 32 68414.0 33 84135.0 34 103931.0 35 128713.0 36 166337.0 37 229093.0 38 310629.0 39 353269.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.338438624455286 21.463130934134895 13.731474744610276 23.46695569679954 2 18.858134710231873 23.548846232644824 34.84409255613227 22.748926500991036 3 19.664663362606845 24.67506640463297 32.60342810725918 23.056842125501 4 13.652287858150933 16.591515227253748 36.6800507324787 33.076146182116624 5 12.628686200633615 38.55944754229259 35.17754264706501 13.634323610008789 6 32.06023490507487 37.63077401877054 13.996192060042645 16.31279901611195 7 25.947103400169546 33.046646363261125 21.903585459653442 19.10266477691588 8 26.75615545863807 34.60575084248719 19.410820725815707 19.227272973059033 9 24.65776304856295 14.367072674696304 21.777655479366047 39.197508797374695 10 16.003561607457748 27.89661485072551 34.062377397010486 22.03744614480626 11 33.022133275495264 22.687223213894114 23.600395814270104 20.69024769634052 12 20.802959835185533 27.2568112438169 31.34815373791544 20.592075183082123 13 31.07286214932917 21.223347274150647 26.322430016035646 21.38136056048454 14 20.403180212651037 23.014184546300598 27.971415817069882 28.611219423978483 15 22.678571535859103 29.785864960523718 25.415926417478314 22.119637086138873 16 21.654909797244322 28.608275450202687 26.77514108543712 22.96167366711587 17 21.436815413445068 27.253146296871517 27.304095067522145 24.005943222161275 18 22.604791948171645 26.097846873710136 29.54475951639523 21.752601661722995 19 22.478261156909596 25.29672552010704 30.706427535887943 21.51858578709542 20 23.448751124267535 25.08896508507183 30.283156204244488 21.179127586416143 21 22.26863820785296 25.87915167893623 30.837524490557357 21.01468562265346 22 21.166871042533213 26.199804496108847 30.489775098427856 22.14354936293008 23 22.008787461315283 26.279051463665652 31.07196093286718 20.640200142151876 24 21.982592102820387 26.314258986780352 29.242010866267286 22.46113804413197 25 22.016958490570573 26.495763982223203 30.089634989308568 21.397642537897653 26 21.6098489741453 27.215114962175946 29.958778359029015 21.216257704649735 27 20.77490196266921 27.257351973694092 29.803648965373462 22.164097098263234 28 21.240530468025742 26.84789929446767 29.880492689031655 22.031077548474933 29 21.459526068286973 26.79815214576636 29.405852019055324 22.33646976689135 30 21.533966548046553 26.99798187593614 30.623575702483212 20.844475873534098 31 22.10828175871792 26.88172495234067 30.34594095109579 20.66405233784562 32 21.713909434955305 26.732483506236722 29.621663321150887 21.93194373765709 33 21.366941097092855 26.690306575816038 30.217848051299644 21.724904275791463 34 20.66615517625691 27.024177234431036 30.78921928819521 21.520448301116847 35 20.475397691804396 28.628703023340908 29.788808934299517 21.10709035055518 36 22.256381663970025 26.852525538972504 29.589700177299317 21.30139261975815 37 21.34825587578113 27.372647599730115 29.673092740581236 21.606003783907518 38 21.242573225339566 26.291127764256196 30.631506407348642 21.834792603055604 39 20.846999279627642 26.039748452461133 31.428962814006344 21.68428945390488 40 19.990543235258954 26.466083920075317 31.05195392741122 22.49141891725451 41 21.149687848658118 25.65048302198307 31.007493915286855 22.192335214071953 42 20.090998830221032 27.201656796343705 30.502151804505722 22.20519256892954 43 20.356977848700176 26.986205980832928 29.892388746329797 22.7644274241371 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 571.0 1 515.0 2 459.0 3 829.5 4 1200.0 5 1200.0 6 1941.0 7 2682.0 8 2869.0 9 3056.0 10 4743.5 11 6431.0 12 6431.0 13 12034.0 14 17637.0 15 27525.5 16 37414.0 17 35228.0 18 33042.0 19 33042.0 20 36097.0 21 39152.0 22 32420.5 23 25689.0 24 28846.5 25 32004.0 26 32004.0 27 35801.5 28 39599.0 29 43225.0 30 46851.0 31 51458.5 32 56066.0 33 56066.0 34 61746.5 35 67427.0 36 73181.5 37 78936.0 38 82933.5 39 86931.0 40 86931.0 41 89600.0 42 92269.0 43 96112.5 44 99956.0 45 104676.0 46 109396.0 47 109396.0 48 136285.0 49 163174.0 50 153014.5 51 142855.0 52 130441.5 53 118028.0 54 118028.0 55 106826.5 56 95625.0 57 83106.5 58 70588.0 59 63392.0 60 56196.0 61 56196.0 62 49630.0 63 43064.0 64 37556.0 65 32048.0 66 27544.5 67 23041.0 68 23041.0 69 19671.0 70 16301.0 71 13609.0 72 10917.0 73 8877.0 74 6837.0 75 6837.0 76 5489.5 77 4142.0 78 3211.5 79 2281.0 80 1756.0 81 1231.0 82 1231.0 83 946.0 84 661.0 85 486.5 86 312.0 87 250.5 88 189.0 89 189.0 90 142.5 91 96.0 92 67.5 93 39.0 94 29.0 95 19.0 96 19.0 97 11.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1664417.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.52634768770922 #Duplication Level Percentage of deduplicated Percentage of total 1 82.2543402994383 46.49537438589202 2 10.601677819801242 11.985482530303205 3 2.9798844648390674 5.053259559860893 4 1.2430702862668506 2.8106489280712093 5 0.6879469466963373 1.944356414982756 6 0.42189961816005567 1.430906670325624 7 0.28548630996979285 1.1296248892203546 8 0.21037278342666013 0.9513284080005233 9 0.1595621020437671 0.8117516572116946 >10 1.01259301954169 10.828786384124518 >50 0.0853942327603694 3.3405544400476264 >100 0.05043118806938085 5.1312770977781845 >500 0.0041492207315138125 1.6343850158860478 >1k 0.0027661471543425414 3.1038701637381125 >5k 1.0639027516702083E-4 0.4198271257276557 >10k+ 3.1917082550106244E-4 2.92856632882963 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18413 1.1062732476296504 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16839 1.0117056002191758 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13445 0.8077903554217484 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6981 0.41942614140566936 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4464 0.26820201908536145 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4043 0.2429078770524454 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3720 0.2235016825711345 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3433 0.20625840759857655 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3325 0.1997696490723178 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3122 0.18757318628685 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2102 0.12629046687218407 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2033 0.12214487114707431 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1962 0.11787911322703386 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1930 0.11595651810814236 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1928 0.11583635591321166 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1702 0.10225802788604059 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1674 0.10057575715701055 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1670 0.1003354327671491 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1666 0.10009510837728766 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.0081097465358744E-5 0.0 10 0.0 0.0 0.0 6.0081097465358744E-5 0.0 11 0.0 0.0 0.0 2.4032438986143498E-4 0.0 12 0.0 0.0 0.0 7.209731695843049E-4 0.0 13 0.0 0.0 0.0 8.411353645150223E-4 0.0 14 0.0 0.0 0.0 9.612975594457399E-4 0.0 15 0.0 0.0 0.0 0.0015020274366339685 0.0 16 0.0 0.0 0.0 0.0018625140214261209 0.0 17 0.0 0.0 0.0 0.0029439737758025783 0.0 18 0.0 0.0 0.0 0.003244379263129372 0.0 19 0.0 0.0 0.0 0.003965352432713677 6.0081097465358744E-5 20 0.0 0.0 0.0 0.0057077042592090805 6.0081097465358744E-5 21 0.0 0.0 0.0 0.009492813399526682 1.8024329239607623E-4 22 0.0 0.0 0.0 0.015621085340993273 1.8024329239607623E-4 23 0.0 0.0 0.0 0.018504978019330494 1.8024329239607623E-4 24 0.0 0.0 0.0 0.024993736545589236 1.8024329239607623E-4 25 0.0 0.0 0.0 0.02901917007576827 1.8024329239607623E-4 26 0.0 0.0 0.0 0.03773092920824529 1.8024329239607623E-4 27 0.0 0.0 0.0 0.08603613157039372 1.8024329239607623E-4 28 0.0 0.0 0.0 0.18312718507441345 1.8024329239607623E-4 29 0.0 0.0 0.0 0.30941765194659754 1.8024329239607623E-4 30 0.0 0.0 0.0 0.48617624068968296 1.8024329239607623E-4 31 0.0 0.0 0.0 0.7003653531536869 2.4032438986143498E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5080 0.0 24.035433 1 ACGTTTA 110 3.8546204E-8 18.5 26 TATACCG 90 2.153396E-6 18.5 5 CGTTTAG 70 1.2196139E-4 18.5 26 GTATTGG 445 0.0 17.460672 1 TTGGACC 735 0.0 15.605443 4 GTATCAA 7850 0.0 15.507008 2 GTAAGAC 85 5.365945E-4 15.235294 3 GGACCCT 700 0.0 14.535715 6 TACCGAC 260 0.0 14.230769 7 TAATTCG 105 1.6563345E-4 14.095238 5 ATTGGAC 570 0.0 13.95614 3 TACACTA 160 1.7846105E-7 13.875 5 CTTACTC 160 1.7846105E-7 13.875 3 TTATGCG 190 7.1304385E-9 13.631579 4 ATACCGA 355 0.0 13.549295 6 TGGACCC 740 0.0 13.5 5 GACCCTC 745 0.0 13.409395 7 CGTTTAT 155 1.888764E-6 13.129032 27 ACAGTCC 230 5.7661964E-10 12.869565 8 >>END_MODULE