##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088706_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 701366 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.570409743272414 31.0 31.0 34.0 30.0 34.0 2 31.781864247767928 31.0 31.0 34.0 30.0 34.0 3 31.86553525548715 31.0 31.0 34.0 30.0 34.0 4 35.573941422880495 37.0 35.0 37.0 33.0 37.0 5 35.455990167758344 37.0 35.0 37.0 33.0 37.0 6 35.49943823909343 37.0 35.0 37.0 33.0 37.0 7 35.3593844012969 37.0 35.0 37.0 33.0 37.0 8 35.396829900508436 37.0 35.0 37.0 33.0 37.0 9 36.98908273283849 39.0 37.0 39.0 33.0 39.0 10 36.81145935217846 39.0 37.0 39.0 32.0 39.0 11 36.901911412871456 39.0 37.0 39.0 33.0 39.0 12 36.764240068666005 39.0 37.0 39.0 32.0 39.0 13 36.7964457929241 39.0 37.0 39.0 32.0 39.0 14 37.7759158556303 40.0 37.0 41.0 32.0 41.0 15 37.798891021235704 40.0 37.0 41.0 32.0 41.0 16 37.68838951417662 39.0 37.0 41.0 32.0 41.0 17 37.71629648428923 39.0 37.0 41.0 32.0 41.0 18 37.67506123764197 39.0 37.0 41.0 32.0 41.0 19 37.734706273186895 40.0 37.0 41.0 32.0 41.0 20 37.61513959901107 39.0 37.0 41.0 32.0 41.0 21 37.551044675675755 39.0 36.0 41.0 32.0 41.0 22 37.423734540881654 39.0 36.0 41.0 32.0 41.0 23 37.23989899709994 39.0 36.0 41.0 31.0 41.0 24 37.07508775731929 39.0 36.0 41.0 31.0 41.0 25 37.26046743069952 39.0 36.0 41.0 31.0 41.0 26 37.143057975436506 39.0 36.0 41.0 31.0 41.0 27 37.02578824750558 39.0 36.0 41.0 31.0 41.0 28 36.855892643783704 39.0 35.0 41.0 30.0 41.0 29 36.74410650074284 39.0 35.0 41.0 30.0 41.0 30 36.54440477582318 39.0 35.0 40.0 30.0 41.0 31 36.38827659167966 38.0 35.0 40.0 30.0 41.0 32 36.20403327221451 38.0 35.0 40.0 30.0 41.0 33 36.051679151826576 38.0 35.0 40.0 30.0 41.0 34 35.86142185392505 38.0 35.0 40.0 29.0 41.0 35 35.720397053749394 38.0 35.0 40.0 27.0 41.0 36 35.51837129259189 38.0 34.0 40.0 27.0 41.0 37 35.43210677449434 38.0 34.0 40.0 26.0 41.0 38 35.238808268436166 38.0 34.0 40.0 25.0 41.0 39 35.1413798216623 38.0 34.0 40.0 25.0 41.0 40 34.97387669205522 38.0 34.0 40.0 24.0 41.0 41 34.8284675903879 38.0 34.0 40.0 23.0 41.0 42 34.55718697513139 38.0 33.0 40.0 22.0 41.0 43 34.20496716407696 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 5.0 16 11.0 17 12.0 18 38.0 19 106.0 20 232.0 21 491.0 22 932.0 23 1635.0 24 2726.0 25 4143.0 26 6023.0 27 8792.0 28 11897.0 29 15294.0 30 19367.0 31 24043.0 32 29304.0 33 35904.0 34 44263.0 35 54280.0 36 69688.0 37 96353.0 38 128120.0 39 147705.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.65485638026365 21.394393226931445 13.756583581183005 23.19416681162189 2 18.76324201629392 23.6019424950739 34.907166871505034 22.72764861712715 3 19.89175409130183 24.812722601323703 32.5690153215297 22.726507985844766 4 13.679163232891245 16.55811658962653 36.64506120912619 33.11765896835603 5 12.666710390865823 38.66597468368869 35.1678011195296 13.499513805915884 6 31.993281681746762 37.53817550323226 13.958190160344241 16.51035265467673 7 25.80350344898384 33.12250665130617 21.968415919790807 19.105573979919185 8 26.849747492749863 34.476578562405365 19.452753626494584 19.220920318350192 9 24.48079889815018 14.640002509388822 22.223489590313758 38.65570900214724 10 16.197391946572832 27.83297165816421 34.00521268496049 21.964423710302466 11 32.51611854580918 22.878354525312034 23.828500383537268 20.77702654534152 12 20.6491332628043 27.419635397210584 31.490405865126053 20.44082547485906 13 30.998793782418883 21.186370596806803 26.63345528582794 21.181380334946375 14 20.264455362820552 23.271444581003355 28.350960839276496 28.11313921689959 15 22.60930812157989 29.85388513272671 25.702700159403218 21.834106586290183 16 21.416350379117322 28.67247628199827 27.13576078680746 22.775412552076947 17 21.096545883319124 27.306855479164945 27.75426809967977 23.842330537836165 18 22.420961381076356 26.22425381327296 29.875271969271395 21.479512836379293 19 22.099873675085476 25.60959613097869 30.997082835495306 21.293447358440527 20 23.202864125150064 25.262986800044484 30.69980580752417 20.834343267281277 21 21.87716541720015 26.098071477659314 31.274826552755624 20.749936552384916 22 20.831206531254722 26.372678458893073 30.74785490029457 22.048260109557635 23 21.59742559519566 26.620195447170236 31.503808282694056 20.278570674940045 24 21.73430134908165 26.681504378598337 29.462506023958962 22.121688248361053 25 21.579032915767232 26.890810218915657 30.394259202755762 21.135897662561344 26 21.449999001947628 27.460983281196977 30.32724711491575 20.761770601939645 27 20.34444213149768 27.64248623400621 30.1197948004323 21.893276834063812 28 20.89265804159312 27.154153466235886 30.31983301158026 21.633355480590733 29 21.13689571493343 27.140465890847288 29.7861601503352 21.93647824388408 30 21.225579797138728 27.500192481528902 30.97156121055198 20.302666510780394 31 21.781494968390255 27.144315521425334 30.782358996586662 20.29183051359775 32 21.366447760513054 27.078444064867703 29.906354171716337 21.648754002902905 33 21.051348368754688 26.962384831885206 30.584887205824064 21.401379593536042 34 20.334176449956228 27.427334658366675 31.103874439308438 21.134614452368663 35 19.992842538703044 29.203582722857966 30.03068298149611 20.77289175694288 36 21.917515248814457 27.2826170644143 29.90136390985591 20.898503776915334 37 21.092125937099887 27.769524043081645 29.807832144700484 21.330517875117984 38 20.829067847600253 26.597240242612273 30.969279947987218 21.604411961800256 39 20.24691815685391 26.427713918268065 31.697573021788912 21.627794903089114 40 19.559687809218012 26.940570258609625 31.29906496750627 22.200676964666094 41 20.97435575719382 25.846990016624698 31.20981056965978 21.968843656521702 42 19.760296336007162 27.58958945828569 30.67699318187651 21.97312102383064 43 20.076393780137618 27.35832646578249 30.130060481973747 22.435219272106146 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 213.0 1 204.0 2 195.0 3 416.0 4 637.0 5 637.0 6 964.0 7 1291.0 8 1423.5 9 1556.0 10 2369.5 11 3183.0 12 3183.0 13 5893.0 14 8603.0 15 13066.5 16 17530.0 17 16221.0 18 14912.0 19 14912.0 20 16142.5 21 17373.0 22 14346.5 23 11320.0 24 12810.0 25 14300.0 26 14300.0 27 15732.5 28 17165.0 29 18500.0 30 19835.0 31 21856.5 32 23878.0 33 23878.0 34 26143.0 35 28408.0 36 30715.0 37 33022.0 38 34543.5 39 36065.0 40 36065.0 41 37022.5 42 37980.0 43 39659.5 44 41339.0 45 43982.5 46 46626.0 47 46626.0 48 58278.5 49 69931.0 50 65362.0 51 60793.0 52 55233.5 53 49674.0 54 49674.0 55 44691.0 56 39708.0 57 34003.0 58 28298.0 59 25253.0 60 22208.0 61 22208.0 62 19696.5 63 17185.0 64 14788.5 65 12392.0 66 10726.0 67 9060.0 68 9060.0 69 7651.0 70 6242.0 71 5203.0 72 4164.0 73 3417.0 74 2670.0 75 2670.0 76 2161.0 77 1652.0 78 1278.0 79 904.0 80 701.0 81 498.0 82 498.0 83 383.5 84 269.0 85 207.5 86 146.0 87 108.0 88 70.0 89 70.0 90 56.5 91 43.0 92 28.0 93 13.0 94 11.0 95 9.0 96 9.0 97 6.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 701366.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.15808920687679 #Duplication Level Percentage of deduplicated Percentage of total 1 87.20118240003117 55.07460056966303 2 7.705454127089638 9.733235182764485 3 1.9139692884170956 3.6264792917120823 4 0.8515872429142627 2.1513849222166903 5 0.4977948974151177 1.571988726883604 6 0.32218938558026405 1.220931957359228 7 0.24282539968270836 1.0735471778399204 8 0.16816184738051082 0.8496624766441202 9 0.13919271186655938 0.7912031141713731 >10 0.8447706518138131 9.896576630673971 >50 0.06989482346301967 3.00823426124791 >100 0.037096130488232903 4.4989792237240565 >500 0.003619134681642366 1.6604736287395097 >1k 0.001583371423218535 1.7936200988406217 >5k 6.785877528079435E-4 3.049082737519346 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8204 1.1697173800840075 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7300 1.040826045174702 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5839 0.8325182572294636 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3237 0.4615279326343164 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2013 0.2870113464296815 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1607 0.22912430884873236 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1504 0.2144386810880482 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1481 0.21115936615119638 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1450 0.20673941993196135 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1263 0.18007716370625323 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 960 0.13687575388598822 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 953 0.13587770151390288 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 910 0.12974680837109298 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 872 0.12432880977977262 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 832 0.11862565336785644 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 818 0.11662954862368578 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 803 0.1144908649692172 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 790 0.11263733913534446 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 740 0.10550839362044925 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.4257891029790439E-4 0.0 10 0.0 0.0 0.0 1.4257891029790439E-4 0.0 11 0.0 0.0 0.0 1.4257891029790439E-4 0.0 12 0.0 0.0 0.0 2.8515782059580877E-4 0.0 13 0.0 0.0 0.0 4.2773673089371313E-4 0.0 14 0.0 0.0 0.0 5.703156411916175E-4 0.0 15 0.0 0.0 0.0 8.554734617874263E-4 0.0 16 0.0 0.0 0.0 0.0021386836544685654 0.0 17 0.0 0.0 0.0 0.0029941571162559917 0.0 18 0.0 0.0 0.0 0.003421893847149705 0.0 19 0.0 0.0 0.0 0.004419946219235036 0.0 20 0.0 0.0 0.0 0.007556682245788932 0.0 21 0.0 0.0 0.0 0.013117259747407203 1.4257891029790439E-4 22 0.0 0.0 0.0 0.01996104744170661 1.4257891029790439E-4 23 0.0 0.0 0.0 0.02409583584034584 1.4257891029790439E-4 24 0.0 0.0 0.0 0.03279314936851801 1.4257891029790439E-4 25 0.0 0.0 0.0 0.0392092003319237 1.4257891029790439E-4 26 0.0 0.0 0.0 0.050615513155756055 1.4257891029790439E-4 27 0.0 0.0 0.0 0.09709623791287288 1.4257891029790439E-4 28 0.0 0.0 0.0 0.20873552467613202 1.4257891029790439E-4 29 0.0 0.0 0.0 0.3409061745222894 1.4257891029790439E-4 30 0.0 0.0 0.0 0.5202704436770531 1.4257891029790439E-4 31 0.0 0.0 0.0 0.7334259145724201 1.4257891029790439E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGTG 40 0.0019304402 23.125002 7 CGATACC 40 0.0019304402 23.125002 4 ACGTTTA 50 2.7006472E-4 22.2 26 GGTATCA 2425 0.0 21.437113 1 GTATTGG 250 0.0 19.980001 1 ATTGGAC 250 0.0 19.240002 3 CATATAG 60 9.231924E-4 18.5 3 CCGATAC 50 0.007032215 18.5 3 TAGACCA 50 0.007032215 18.5 4 TGCGGTC 50 0.007032215 18.5 12 TGCGGTA 50 0.007032215 18.5 36 CAGGGCG 50 0.007032215 18.5 4 CTAGTCA 80 1.6152058E-5 18.5 4 TTAACGG 80 1.6152058E-5 18.5 35 TATCGCC 50 0.007032215 18.5 31 TAGTCAG 100 2.8709474E-7 18.5 5 GTATTAG 150 2.5102054E-10 17.266666 1 TGGGCTA 65 0.0015791036 17.076923 10 GGACAGT 135 2.2148015E-8 16.444445 6 GGACCCT 385 0.0 16.337662 6 >>END_MODULE