##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088703_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3125888 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53707394506777 31.0 31.0 34.0 30.0 34.0 2 31.746092950227265 31.0 31.0 34.0 30.0 34.0 3 31.81818734388436 31.0 31.0 34.0 30.0 34.0 4 35.539774297735555 37.0 35.0 37.0 33.0 37.0 5 35.413313272900375 37.0 35.0 37.0 33.0 37.0 6 35.46481479822694 37.0 35.0 37.0 33.0 37.0 7 35.32571064606282 37.0 35.0 37.0 32.0 37.0 8 35.36096782738217 37.0 35.0 37.0 33.0 37.0 9 36.94896458222431 39.0 37.0 39.0 33.0 39.0 10 36.764965667355966 39.0 37.0 39.0 32.0 39.0 11 36.852346597190945 39.0 37.0 39.0 32.0 39.0 12 36.712108367286355 39.0 35.0 39.0 32.0 39.0 13 36.752874383215264 39.0 35.0 39.0 32.0 39.0 14 37.7337076696286 40.0 37.0 41.0 32.0 41.0 15 37.743509044469924 40.0 37.0 41.0 32.0 41.0 16 37.6327469186356 39.0 36.0 41.0 32.0 41.0 17 37.66153553806151 39.0 37.0 41.0 32.0 41.0 18 37.6217877927808 39.0 36.0 41.0 32.0 41.0 19 37.673752866385485 39.0 37.0 41.0 32.0 41.0 20 37.54836641619917 39.0 36.0 41.0 32.0 41.0 21 37.49344986128742 39.0 36.0 41.0 32.0 41.0 22 37.36094543374555 39.0 36.0 41.0 31.0 41.0 23 37.189060516563615 39.0 36.0 41.0 31.0 41.0 24 37.026498390217434 39.0 36.0 41.0 31.0 41.0 25 37.204961918021375 39.0 36.0 41.0 31.0 41.0 26 37.08412777425167 39.0 36.0 41.0 31.0 41.0 27 36.96875671809099 39.0 36.0 41.0 31.0 41.0 28 36.79560048216699 39.0 35.0 41.0 30.0 41.0 29 36.6867850031735 39.0 35.0 40.0 30.0 41.0 30 36.48937837824004 39.0 35.0 40.0 30.0 41.0 31 36.3399238872282 38.0 35.0 40.0 30.0 41.0 32 36.1686391195078 38.0 35.0 40.0 30.0 41.0 33 36.03442093894599 38.0 35.0 40.0 29.0 41.0 34 35.85398549148274 38.0 35.0 40.0 28.0 41.0 35 35.7274681626469 38.0 35.0 40.0 27.0 41.0 36 35.53475716340445 38.0 34.0 40.0 27.0 41.0 37 35.46890003736538 38.0 34.0 40.0 26.0 41.0 38 35.27452966964907 38.0 34.0 40.0 25.0 41.0 39 35.18763884054707 38.0 34.0 40.0 25.0 41.0 40 35.021191738155686 38.0 34.0 40.0 24.0 41.0 41 34.891596563920395 38.0 34.0 40.0 24.0 41.0 42 34.642294925473976 38.0 33.0 40.0 23.0 41.0 43 34.283275664387205 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 7.0 15 15.0 16 40.0 17 89.0 18 206.0 19 518.0 20 1119.0 21 2414.0 22 4468.0 23 7704.0 24 12481.0 25 19371.0 26 28480.0 27 39257.0 28 53245.0 29 68906.0 30 87192.0 31 107412.0 32 131958.0 33 161214.0 34 196773.0 35 241221.0 36 310198.0 37 423896.0 38 575433.0 39 652262.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.725515437533275 21.731200861963064 14.269097293313132 23.274186407190534 2 18.96101203881905 23.54690891036403 34.8802324331518 22.611846617665122 3 19.731129202325867 24.593875404365097 32.67148407108636 23.00351132222268 4 13.980315353589123 16.812502559272758 35.9853584005569 33.22182368658122 5 12.670799465623848 38.68260795012489 34.92220450636747 13.72438807788379 6 32.23883901150649 37.31189345235658 13.898162698087713 16.55110483804922 7 25.72344242660006 33.26043671430327 21.743517362106385 19.272603496990296 8 26.63675090086401 34.89059748781786 19.197296896114 19.275354715204127 9 24.527814176323655 14.593709051635887 22.016431810736663 38.862044961303795 10 16.30259945333934 28.08629099954957 33.72372906514885 21.887380481962246 11 32.97677332009336 22.75475001023709 23.49124472789812 20.777231941771426 12 20.69379964989149 27.470465992383602 31.151851889767002 20.683882467957908 13 31.09593178002539 21.363561330412352 26.344130052004424 21.19637683755784 14 20.24282379918922 23.30083483477335 28.09249723598542 28.363844130052 15 22.66079270914377 29.86165851111748 25.582298534048565 21.895250245690185 16 21.53858359608534 28.546960095819173 26.967121022890133 22.947335285205355 17 21.348877502968758 27.443913537529173 27.45034371033127 23.756865249170794 18 22.51158710740756 26.195660241185863 29.655285154170592 21.637467497235985 19 22.460209706809714 25.41844109577822 30.94291926006306 21.178429937349 20 23.2300069612219 25.003710945497726 30.695373602637076 21.070908490643298 21 22.1184508210147 25.893090219483234 31.169734808156914 20.81872415134515 22 21.03475876294992 26.169427695426066 30.758203748822734 22.037609792801277 23 21.924649891486837 26.293552424143158 31.32607438270341 20.4557233016666 24 21.79390304451087 26.458209635150077 29.412954014987104 22.33493330535195 25 21.703144834363865 26.638318455427708 30.49251924573113 21.166017464477292 26 21.45579112239466 27.276025244666474 30.249132406535356 21.019051226403505 27 20.583846894066582 27.232229689611398 30.073630277220424 22.110293139101593 28 21.01626801728021 26.81698768477949 30.213334578846073 21.95340971909422 29 21.28892653863478 26.72571762008108 29.67972620900045 22.30562963228369 30 21.380612485156217 26.949014168133985 31.02561576102535 20.644757585684452 31 22.01691167437861 26.68281781049097 30.683728911592485 20.61654160353794 32 21.46740382252979 26.67427623766431 29.979960894312274 21.878359045493635 33 21.208533383153842 26.47954757176201 30.516128536914948 21.795790508169198 34 20.48169992015069 26.84270837598788 31.219512663281602 21.45607904057983 35 20.27423887228205 28.27033470169117 30.22114036075509 21.234286065271693 36 22.108437666352728 26.413102452807006 30.115282441341467 21.36317743949879 37 21.16397004627165 27.00416649604848 30.185758414888824 21.646105042791042 38 21.032167499283403 25.78470501822202 31.35636977396503 21.826757708529545 39 20.591556703247203 25.56236819745301 31.96253352647312 21.883541572826665 40 19.646417274067403 26.03640949387822 31.731015314688175 22.5861579173662 41 20.748152205069406 25.27345829409115 31.70871765079235 22.26967185004709 42 19.701217701977804 26.946230959010688 31.09468413455632 22.25786720445518 43 19.982257841611727 26.726165492813564 30.55007089185537 22.74150577371934 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1309.0 1 1146.5 2 984.0 3 1791.5 4 2599.0 5 2599.0 6 3929.5 7 5260.0 8 5844.0 9 6428.0 10 9889.0 11 13350.0 12 13350.0 13 24908.0 14 36466.0 15 56045.5 16 75625.0 17 69770.0 18 63915.0 19 63915.0 20 69216.0 21 74517.0 22 60764.5 23 47012.0 24 52592.0 25 58172.0 26 58172.0 27 65098.0 28 72024.0 29 78061.5 30 84099.0 31 93191.0 32 102283.0 33 102283.0 34 113828.5 35 125374.0 36 136094.0 37 146814.0 38 155140.5 39 163467.0 40 163467.0 41 168661.5 42 173856.0 43 182450.0 44 191044.0 45 202282.0 46 213520.0 47 213520.0 48 265179.5 49 316839.0 50 293216.0 51 269593.0 52 244220.5 53 218848.0 54 218848.0 55 197496.5 56 176145.0 57 153248.5 58 130352.0 59 117199.5 60 104047.0 61 104047.0 62 91923.0 63 79799.0 64 69032.5 65 58266.0 66 49207.5 67 40149.0 68 40149.0 69 34007.5 70 27866.0 71 23206.0 72 18546.0 73 15243.0 74 11940.0 75 11940.0 76 9499.5 77 7059.0 78 5462.0 79 3865.0 80 3042.5 81 2220.0 82 2220.0 83 1678.0 84 1136.0 85 853.0 86 570.0 87 432.0 88 294.0 89 294.0 90 214.0 91 134.0 92 101.0 93 68.0 94 44.0 95 20.0 96 20.0 97 13.5 98 7.0 99 7.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3125888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.261888642741134 #Duplication Level Percentage of deduplicated Percentage of total 1 77.4953797876237 38.175687694248516 2 12.417148720913348 12.233843950999777 3 4.294709748091593 6.346965400901487 4 1.8945165496778702 3.733098532082456 5 1.0035927530719606 2.471943722224646 6 0.6099870899960428 1.8029469660536863 7 0.40424875367111046 1.3939839961119191 8 0.28140580550223837 1.109006516325771 9 0.2106333540416296 0.9338577148121243 >10 1.194001819084375 11.18564216290991 >50 0.11346132777835893 3.902870365725724 >100 0.07155820295866487 6.774364601862749 >500 0.004807989455668185 1.5888837200501917 >1k 0.0038983698287337358 3.570363381108311 >5k 3.8983698287337363E-4 1.2783533253381079 >10k+ 2.598913219155824E-4 3.498187949244579 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36305 1.161429968060276 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33593 1.0746706215961672 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25530 0.8167279185946521 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13867 0.4436179415257361 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7728 0.2472257483313542 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7633 0.24418661193235328 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7173 0.22947079357929653 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6091 0.19485662954014987 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5941 0.19005799312067484 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5374 0.17191914745505915 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4293 0.1373369743253757 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4053 0.12965915605421563 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3917 0.12530839236722494 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3793 0.12134151959379223 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3504 0.11209614675893698 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3345 0.10700959215429343 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3204 0.1024988739199869 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3180 0.1017310920928709 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.199090946316694E-5 0.0 3 0.0 0.0 0.0 3.199090946316694E-5 0.0 4 0.0 0.0 0.0 3.199090946316694E-5 0.0 5 3.199090946316694E-5 0.0 0.0 6.398181892633389E-5 0.0 6 3.199090946316694E-5 0.0 0.0 6.398181892633389E-5 0.0 7 3.199090946316694E-5 0.0 0.0 9.597272838950084E-5 0.0 8 6.398181892633389E-5 0.0 0.0 9.597272838950084E-5 0.0 9 6.398181892633389E-5 0.0 0.0 3.5190000409483644E-4 0.0 10 6.398181892633389E-5 0.0 0.0 4.478727324843373E-4 0.0 11 6.398181892633389E-5 0.0 0.0 6.39818189263339E-4 0.0 12 6.398181892633389E-5 0.0 0.0 8.637545555055076E-4 0.0 13 9.597272838950084E-5 0.0 0.0 8.637545555055076E-4 0.0 14 9.597272838950084E-5 0.0 0.0 0.0010237091028213422 0.0 15 9.597272838950084E-5 0.0 0.0 0.0011836636501371771 0.0 16 1.5995454731583474E-4 0.0 0.0 0.0016635272920846812 0.0 17 1.5995454731583474E-4 0.0 0.0 0.002431309119200688 0.0 18 1.5995454731583474E-4 0.0 0.0 0.0028152000327586915 0.0 19 1.5995454731583474E-4 0.0 0.0 0.0037109454977273656 0.0 20 1.5995454731583474E-4 0.0 0.0 0.00575836370337005 6.398181892633389E-5 21 1.5995454731583474E-4 0.0 0.0 0.009085418287539412 6.398181892633389E-5 22 1.5995454731583474E-4 0.0 0.0 0.014747809262519963 6.398181892633389E-5 23 1.5995454731583474E-4 0.0 0.0 0.018522736579173662 6.398181892633389E-5 24 1.5995454731583474E-4 0.0 0.0 0.02472897301502805 6.398181892633389E-5 25 1.5995454731583474E-4 0.0 0.0 0.030327382171082266 6.398181892633389E-5 26 1.5995454731583474E-4 0.0 0.0 0.040916373203390526 6.398181892633389E-5 27 1.5995454731583474E-4 0.0 0.0 0.09942774661152287 6.398181892633389E-5 28 1.5995454731583474E-4 0.0 0.0 0.21942564800786207 6.398181892633389E-5 29 1.5995454731583474E-4 0.0 0.0 0.36968694975635724 6.398181892633389E-5 30 1.5995454731583474E-4 0.0 0.0 0.5933673887228206 6.398181892633389E-5 31 1.5995454731583474E-4 0.0 0.0 0.8851564739363662 6.398181892633389E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10380 0.0 24.2211 1 GTATTGG 725 0.0 16.586208 1 GTATCAA 15820 0.0 15.892225 2 TTGGACC 1325 0.0 14.939623 4 TGGACCC 1365 0.0 14.501831 5 TATCGGC 115 2.2121392E-5 14.47826 2 GGACCCT 1320 0.0 14.435607 6 CGCGATA 145 8.923307E-7 14.034483 14 ATTGGAC 910 0.0 14.0274725 3 ACGTTTA 215 1.9826984E-10 13.767442 26 TAGGACC 405 0.0 13.703704 4 GTATTAG 460 0.0 13.673912 1 CTAATAC 585 0.0 13.598291 3 TTAACGG 290 0.0 13.396551 35 TATACCG 180 5.1679308E-8 13.36111 5 GACCCTC 1400 0.0 13.346428 7 CGACGAA 265 1.8189894E-12 13.264152 10 TATACAC 1580 0.0 12.996835 37 TACACCG 215 2.904926E-9 12.906977 5 TCTATAC 275 3.6379788E-12 12.781817 3 >>END_MODULE