##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088702_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4673690 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.566812518588097 31.0 31.0 34.0 30.0 34.0 2 31.776615051490364 31.0 31.0 34.0 30.0 34.0 3 31.857638183105855 31.0 31.0 34.0 30.0 34.0 4 35.576873733602355 37.0 35.0 37.0 33.0 37.0 5 35.44472205045692 37.0 35.0 37.0 33.0 37.0 6 35.48362856757723 37.0 35.0 37.0 33.0 37.0 7 35.34866925277458 37.0 35.0 37.0 33.0 37.0 8 35.372287207752336 37.0 35.0 37.0 33.0 37.0 9 36.9728875898915 39.0 37.0 39.0 33.0 39.0 10 36.78068057573352 39.0 37.0 39.0 32.0 39.0 11 36.872171881318614 39.0 37.0 39.0 33.0 39.0 12 36.727618006329045 39.0 35.0 39.0 32.0 39.0 13 36.76832395815726 39.0 37.0 39.0 32.0 39.0 14 37.7656042655803 40.0 37.0 41.0 32.0 41.0 15 37.77846006046614 40.0 37.0 41.0 32.0 41.0 16 37.66729671843875 39.0 36.0 41.0 32.0 41.0 17 37.67618990562061 39.0 37.0 41.0 32.0 41.0 18 37.63050694419185 39.0 36.0 41.0 32.0 41.0 19 37.67243334495869 39.0 37.0 41.0 32.0 41.0 20 37.54295043102987 39.0 36.0 41.0 32.0 41.0 21 37.48048458498531 39.0 36.0 41.0 32.0 41.0 22 37.34457184794028 39.0 36.0 41.0 31.0 41.0 23 37.16846774176293 39.0 36.0 41.0 31.0 41.0 24 37.00697115127448 39.0 36.0 41.0 31.0 41.0 25 37.1999007208437 39.0 36.0 41.0 31.0 41.0 26 37.08545645945709 39.0 36.0 41.0 31.0 41.0 27 36.97524418607139 39.0 36.0 41.0 31.0 41.0 28 36.81007961589237 39.0 35.0 41.0 30.0 41.0 29 36.7065511405335 39.0 35.0 41.0 30.0 41.0 30 36.525639270041445 39.0 35.0 40.0 30.0 41.0 31 36.395042461096054 39.0 35.0 40.0 30.0 41.0 32 36.227236509053874 38.0 35.0 40.0 30.0 41.0 33 36.10179258786954 38.0 35.0 40.0 29.0 41.0 34 35.925993593926854 38.0 35.0 40.0 29.0 41.0 35 35.80332734948189 38.0 35.0 40.0 28.0 41.0 36 35.62252994956876 38.0 34.0 40.0 27.0 41.0 37 35.570419946551866 38.0 34.0 40.0 26.0 41.0 38 35.39646168231098 38.0 34.0 40.0 26.0 41.0 39 35.31853524730994 38.0 34.0 40.0 25.0 41.0 40 35.17219156597891 38.0 34.0 40.0 25.0 41.0 41 35.060985003284344 38.0 34.0 40.0 24.0 41.0 42 34.82747400875967 38.0 33.0 40.0 23.0 41.0 43 34.49444379066647 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 12.0 15 25.0 16 49.0 17 130.0 18 319.0 19 788.0 20 1706.0 21 3470.0 22 6538.0 23 11294.0 24 18207.0 25 28072.0 26 40959.0 27 57419.0 28 77006.0 29 100293.0 30 128521.0 31 159209.0 32 194525.0 33 238317.0 34 293265.0 35 360172.0 36 460634.0 37 627825.0 38 863490.0 39 1001440.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.31183283444131 21.12356617576262 13.545571058414229 24.01902993138184 2 19.00314312673712 23.10007724089531 34.690084280301 23.20669535206657 3 19.5855737115641 24.364131981368043 32.28857712000582 23.761717187062043 4 13.915385915625556 16.473471710789546 36.20629523994959 33.40484713363531 5 12.880229540256199 38.30669128675629 35.126655811575006 13.686423361412503 6 32.67953159067032 37.34779157368161 14.000564864165147 15.972111971482919 7 26.452567457405173 32.71543469934891 21.702209603118735 19.12978824012718 8 26.82835190181634 34.66586358958339 19.21201448962169 19.293770018978577 9 24.89559641311255 14.365565538150799 21.439248217147476 39.299589831589174 10 16.142940588699723 27.84848802552159 34.08538007441658 21.923191311362114 11 33.5221848261224 22.490537455415314 23.26975045413795 20.717527264324335 12 20.791152173122306 26.997768358620277 31.085373655505606 21.125705812751807 13 31.10867430231787 21.125427659943213 25.985762855473943 21.780135182264974 14 20.669749170355757 22.740404263012735 27.51384880041252 29.07599776621898 15 22.98263256655876 29.644456521506562 24.926492771236433 22.44641814069825 16 22.255027612015347 28.33690296104363 26.313255693039117 23.094813733901905 17 21.763766959297687 27.216610429874464 26.993724444710708 24.025898166117138 18 22.866129332497447 26.117650079487515 28.986368372741882 22.029852215273156 19 22.816489754348275 25.385915625554965 29.97832547729952 21.819269142797232 20 23.65790200034662 25.143901285707866 29.598967839116412 21.599228874829095 21 22.606484383859435 25.843091861034857 30.074202610785054 21.476221144320654 22 21.6727681981475 26.090048762326983 29.76470412029895 22.472478919226564 23 22.444449674668196 26.264386384206055 30.292552565531732 20.998611375594017 24 22.382100652803246 26.21887630544602 28.559981513536414 22.839041528214324 25 22.441603957472577 26.33529395402776 29.45250968720647 21.770592401293197 26 22.06430037079909 26.983111845244334 29.33587807492581 21.616709709030765 27 21.216597592052533 27.033307729010698 29.154265687283498 22.595828991653278 28 21.773331136639356 26.62502219873376 29.236021216640385 22.365625447986496 29 21.85957990367354 26.60850420117723 28.820139975051834 22.711775920097395 30 22.0497722356425 26.828437487295904 29.89089990992128 21.23089036714031 31 22.574774963679662 26.608333030218095 29.634635587726187 21.18225641837606 32 22.149843057626843 26.490481824853596 29.098891882003297 22.260783235516264 33 21.821815310814365 26.434936848614264 29.559256176597078 22.18399166397429 34 21.281321610975482 26.688269868134174 30.120119220573038 21.91028930031731 35 21.0136744199979 28.141917842218888 29.28354255417026 21.560865183612947 36 22.616925812366674 26.486994216561214 29.080555193005953 21.815524778066152 37 21.891289323853318 26.750661682738908 29.27720922868226 22.080839764725514 38 21.696218619549008 25.839754027331725 30.25868211199288 22.20534524112639 39 21.208552556973185 25.6874332700714 30.90780518177286 22.196208991182555 40 20.48090480968999 25.94819082994379 30.748552000667566 22.82235235969865 41 21.448277485241853 25.149999251127053 30.75007114292989 22.6516521207012 42 20.29434986060265 26.73217521915232 30.318527758580476 22.654947161664552 43 20.647004829160682 26.447111383082746 29.821768238800605 23.084115548955964 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1743.0 1 1523.0 2 1303.0 3 2370.0 4 3437.0 5 3437.0 6 5076.0 7 6715.0 8 7373.0 9 8031.0 10 12162.5 11 16294.0 12 16294.0 13 30407.5 14 44521.0 15 68668.5 16 92816.0 17 87409.5 18 82003.0 19 82003.0 20 89967.0 21 97931.0 22 82945.5 23 67960.0 24 77615.0 25 87270.0 26 87270.0 27 97723.0 28 108176.0 29 116914.0 30 125652.0 31 138627.5 32 151603.0 33 151603.0 34 168739.0 35 185875.0 36 201928.5 37 217982.0 38 230365.0 39 242748.0 40 242748.0 41 251467.0 42 260186.0 43 271692.0 44 283198.0 45 297437.5 46 311677.0 47 311677.0 48 379619.5 49 447562.0 50 421625.0 51 395688.0 52 363754.0 53 331820.0 54 331820.0 55 302711.0 56 273602.0 57 240296.0 58 206990.0 59 188841.5 60 170693.0 61 170693.0 62 151980.5 63 133268.0 64 117075.0 65 100882.0 66 87105.5 67 73329.0 68 73329.0 69 62970.5 70 52612.0 71 44555.5 72 36499.0 73 29955.5 74 23412.0 75 23412.0 76 18682.0 77 13952.0 78 10791.5 79 7631.0 80 5973.5 81 4316.0 82 4316.0 83 3253.5 84 2191.0 85 1633.0 86 1075.0 87 817.5 88 560.0 89 560.0 90 420.0 91 280.0 92 202.5 93 125.0 94 90.5 95 56.0 96 56.0 97 35.5 98 15.0 99 13.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4673690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.42268404655493 #Duplication Level Percentage of deduplicated Percentage of total 1 75.7929327216027 35.943043014183594 2 13.141006949904863 12.463636412778415 3 4.63651585267132 6.596280790742257 4 2.139526752885487 4.058484048449602 5 1.1435489624652866 2.7115080569378494 6 0.6710528427913093 1.9093876165340855 7 0.443248408419098 1.4714020458618053 8 0.2977532234912779 1.1296205633176104 9 0.23489709527360053 1.0025505659352123 >10 1.27437613973765 11.402890753073153 >50 0.1306157543505758 4.342910362794986 >100 0.08476864150939876 7.524549530946787 >500 0.005736551995897724 1.8454776052954578 >1k 0.0034328968594948906 3.2261689146770904 >5k 3.1618786863767915E-4 1.0564251944362435 >10k+ 2.710181731180107E-4 3.3156645240357934 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 43965 0.9406914022966864 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40984 0.8769088236489798 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32094 0.6866950953101297 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16963 0.3629466224760307 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10617 0.22716525914213392 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10165 0.2174940999510023 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9265 0.19823736704830658 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9040 0.19342318382263265 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7970 0.1705290680383166 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7529 0.16109326891599574 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 5417 0.1159041357043364 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5050 0.10805166795401493 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5047 0.10798747884433926 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4744 0.10150437876709838 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4710 0.10077690219077431 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.1396369891884144E-5 0.0 3 0.0 0.0 0.0 2.1396369891884144E-5 0.0 4 0.0 0.0 0.0 2.1396369891884144E-5 0.0 5 0.0 2.1396369891884144E-5 0.0 2.1396369891884144E-5 0.0 6 4.279273978376829E-5 2.1396369891884144E-5 0.0 2.1396369891884144E-5 0.0 7 4.279273978376829E-5 2.1396369891884144E-5 0.0 8.558547956753658E-5 0.0 8 6.418910967565244E-5 2.1396369891884144E-5 0.0 8.558547956753658E-5 0.0 9 1.0698184945942072E-4 2.1396369891884144E-5 0.0 1.7117095913507315E-4 0.0 10 1.2837821935130487E-4 2.1396369891884144E-5 0.0 1.7117095913507315E-4 0.0 11 1.49774589243189E-4 4.279273978376829E-5 0.0 2.5675643870260974E-4 0.0 12 1.49774589243189E-4 4.279273978376829E-5 0.0 2.99549178486378E-4 0.0 13 1.49774589243189E-4 4.279273978376829E-5 0.0 3.209455483782621E-4 0.0 14 2.1396369891884143E-4 4.279273978376829E-5 0.0 3.8513465805391456E-4 0.0 15 2.1396369891884143E-4 4.279273978376829E-5 0.0 5.777019870808718E-4 0.0 16 2.1396369891884143E-4 4.279273978376829E-5 0.0 8.98647535459134E-4 0.0 17 2.3536006881072556E-4 4.279273978376829E-5 0.0 0.0013051785634049327 0.0 18 2.3536006881072556E-4 4.279273978376829E-5 0.0 0.0018186914408101522 0.0 19 2.3536006881072556E-4 4.279273978376829E-5 0.0 0.0023322043182153716 0.0 20 2.3536006881072556E-4 4.279273978376829E-5 0.0 0.004129499389133639 0.0 21 2.5675643870260974E-4 4.279273978376829E-5 0.0 0.0069752165847542305 0.0 22 2.5675643870260974E-4 4.279273978376829E-5 0.0 0.010527013986806999 0.0 23 2.5675643870260974E-4 6.418910967565244E-5 0.0 0.013265749332968169 0.0 24 2.5675643870260974E-4 6.418910967565244E-5 0.0 0.01793015796939891 0.0 25 2.5675643870260974E-4 6.418910967565244E-5 0.0 0.021524748111235448 0.0 26 2.7815280859449387E-4 6.418910967565244E-5 0.0 0.029420008601340697 0.0 27 2.7815280859449387E-4 6.418910967565244E-5 0.0 0.0763636441441345 0.0 28 2.7815280859449387E-4 6.418910967565244E-5 0.0 0.1714919046834514 0.0 29 2.7815280859449387E-4 8.558547956753658E-5 0.0 0.29079806320059737 0.0 30 2.7815280859449387E-4 8.558547956753658E-5 0.0 0.461883436856103 0.0 31 2.7815280859449387E-4 8.558547956753658E-5 0.0 0.6806613190006183 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12115 0.0 24.524143 1 GTATTGG 1355 0.0 18.704798 1 ATTGGAC 1405 0.0 17.512455 3 TTGGACC 2080 0.0 16.54327 4 GGACCCT 2000 0.0 16.095 6 GTATCAA 18905 0.0 15.7061615 2 ACGTTTA 285 0.0 14.929826 26 ACCGTCG 215 1.2732926E-11 14.627907 23 GACCCTC 2120 0.0 14.485849 7 TGGACCC 2180 0.0 14.426605 5 GTATTAG 880 0.0 14.085227 1 TCACGTT 310 0.0 13.129032 24 TATTGGA 1885 0.0 12.856764 2 CCGGTCT 735 0.0 12.585033 9 TACTCCG 740 0.0 12.500001 5 TATACTG 655 0.0 12.427481 5 TCCGGTC 775 0.0 12.412903 8 CCCTCGC 2260 0.0 12.36062 9 TAGTACT 650 0.0 12.2384615 4 TCACGTA 745 0.0 12.167785 25 >>END_MODULE