##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088696_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3937179 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56798230408117 31.0 31.0 34.0 30.0 34.0 2 31.77330520151611 31.0 31.0 34.0 30.0 34.0 3 31.858897195174514 31.0 31.0 34.0 30.0 34.0 4 35.57480292361612 37.0 35.0 37.0 33.0 37.0 5 35.43788941269879 37.0 35.0 37.0 33.0 37.0 6 35.482340274597625 37.0 35.0 37.0 33.0 37.0 7 35.35218617187585 37.0 35.0 37.0 33.0 37.0 8 35.370783243535534 37.0 35.0 37.0 33.0 37.0 9 36.97826260883745 39.0 37.0 39.0 33.0 39.0 10 36.78027415060377 39.0 37.0 39.0 32.0 39.0 11 36.877136650378354 39.0 37.0 39.0 33.0 39.0 12 36.736898931951025 39.0 35.0 39.0 32.0 39.0 13 36.77777515322519 39.0 37.0 39.0 32.0 39.0 14 37.79253343574168 40.0 37.0 41.0 32.0 41.0 15 37.801246781007414 40.0 37.0 41.0 32.0 41.0 16 37.69556299065905 39.0 37.0 41.0 32.0 41.0 17 37.69410204616046 39.0 37.0 41.0 32.0 41.0 18 37.644211502702824 39.0 37.0 41.0 32.0 41.0 19 37.68384317807242 40.0 37.0 41.0 32.0 41.0 20 37.555568085677585 39.0 36.0 41.0 32.0 41.0 21 37.49313912321487 39.0 36.0 41.0 32.0 41.0 22 37.35525893031534 39.0 36.0 41.0 31.0 41.0 23 37.18364366974425 39.0 36.0 41.0 31.0 41.0 24 37.03205493070038 39.0 36.0 41.0 31.0 41.0 25 37.226006996379894 39.0 36.0 41.0 31.0 41.0 26 37.12312521223952 39.0 36.0 41.0 31.0 41.0 27 37.00459999405666 39.0 36.0 41.0 31.0 41.0 28 36.852799936197975 39.0 36.0 41.0 30.0 41.0 29 36.748741675194346 39.0 35.0 41.0 30.0 41.0 30 36.58276420757095 39.0 35.0 40.0 30.0 41.0 31 36.46865890527202 39.0 35.0 40.0 30.0 41.0 32 36.29873165532987 38.0 35.0 40.0 30.0 41.0 33 36.1843718560929 38.0 35.0 40.0 30.0 41.0 34 36.01712088782349 38.0 35.0 40.0 29.0 41.0 35 35.90104742507262 38.0 35.0 40.0 28.0 41.0 36 35.716911270734705 38.0 35.0 40.0 27.0 41.0 37 35.68661800746169 38.0 35.0 40.0 27.0 41.0 38 35.51471472340983 38.0 34.0 40.0 26.0 41.0 39 35.448795698646165 38.0 34.0 40.0 26.0 41.0 40 35.3209467997264 38.0 34.0 40.0 25.0 41.0 41 35.21500622653936 38.0 34.0 40.0 25.0 41.0 42 35.002755272239334 38.0 34.0 40.0 24.0 41.0 43 34.662602335326895 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 6.0 14 8.0 15 22.0 16 43.0 17 116.0 18 270.0 19 662.0 20 1449.0 21 2955.0 22 5517.0 23 9324.0 24 15165.0 25 22912.0 26 33601.0 27 47287.0 28 63822.0 29 82718.0 30 105772.0 31 131689.0 32 161159.0 33 198126.0 34 243723.0 35 300424.0 36 384996.0 37 525557.0 38 737712.0 39 862143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.40030209446916 21.34604497280921 13.30193521808381 23.951717714637816 2 19.073631145548628 23.121630995187164 34.64213844481036 23.16259941445385 3 19.841744558731012 24.664563130098987 31.69429177591367 23.799400535256336 4 14.137812885825104 16.592793977616967 36.38008330329914 32.88930983325879 5 13.214283627947829 38.04645407282727 34.90867445955594 13.830587839668961 6 32.52689298606947 37.383466690236844 14.252869884757589 15.836770438936101 7 26.520866844001755 32.26068715697203 22.123276589659753 19.095169409366452 8 26.537731710953448 34.751074309804046 19.534849698223017 19.17634428101948 9 24.972524744239465 14.315224174466032 21.49541588025335 39.21683520104115 10 16.200533427614037 27.525545574636052 34.093420695376054 22.180500302373858 11 33.55450691980222 22.69353260291188 23.008885295791735 20.74307518149416 12 20.54938320050981 26.957016686312713 31.136100238267044 21.357499874910438 13 30.734696085699937 21.208687743178555 25.94263557740199 22.11398059371951 14 20.666853094563393 22.59998846890121 27.511195198389505 29.221963238145893 15 23.390275118301705 29.32160310719934 24.846927203462172 22.441194571036778 16 22.27132675451129 28.25144602264718 26.19657373972583 23.280653483115703 17 21.66264221159363 27.14029511993232 27.231019976485705 23.966042691988353 18 22.559375634178686 26.24399347857946 28.93096808654115 22.265662800700706 19 22.877242817763683 25.499374044207794 29.725191564823444 21.89819157320508 20 23.600730370653707 25.416065665289793 29.40003489808312 21.58316906597338 21 22.702523812099983 26.102623223378973 29.52723256930914 21.6676203952119 22 21.854403876481104 26.270052745887345 29.45375356314762 22.421789814483922 23 22.34119911743916 26.445203532783246 29.836692718314307 21.37690463146329 24 22.46588229796004 26.439717371244743 28.38661894722084 22.707781383574382 25 22.447899879583836 26.56302901138099 29.092784453030962 21.89628665600421 26 22.18745959988103 26.91376236640498 29.002821563357926 21.895956470356058 27 21.564831063053013 26.892198703691143 28.963224684475865 22.57974554877998 28 21.82389980237119 26.703307114052983 29.03342723305189 22.43936585052394 29 21.9438333893379 26.61590951287711 28.872423631234444 22.567833466550542 30 22.16249248510164 26.836041744609528 29.508513582948602 21.492952187340226 31 22.512413075453264 26.74107527242221 29.32330483323212 21.42320681889241 32 21.93392781989338 26.628558163090883 28.99647183935503 22.441042177660705 33 21.81638172915176 26.54443701950051 29.38781802910155 22.25136322224618 34 21.36171609164836 26.535014029080212 29.959242391570207 22.14402748770122 35 21.26352395966757 27.66193764621827 29.125803017846025 21.948735376268136 36 22.49796110362267 26.592415534066394 28.952023771334755 21.95759959097618 37 21.815949947919563 26.638565328119444 29.17675320324527 22.36873152071572 38 21.727282401943118 26.00669159314321 29.914845121341955 22.351180883571715 39 21.30053015115645 25.717906145491483 30.562669363013466 22.418894340338603 40 20.692226591678967 25.98182607394787 30.437529002364382 22.88841833200878 41 21.41467278983252 25.333798641108267 30.40351988060487 22.848008688454346 42 20.464474691143074 26.54971998987092 30.113566083736604 22.8722392352494 43 20.74531028434318 26.22385215404227 29.786250510835295 23.24458705077925 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1100.0 1 1068.0 2 1036.0 3 1924.0 4 2812.0 5 2812.0 6 4273.0 7 5734.0 8 6272.0 9 6810.0 10 10217.5 11 13625.0 12 13625.0 13 24961.0 14 36297.0 15 54052.5 16 71808.0 17 67933.0 18 64058.0 19 64058.0 20 71319.5 21 78581.0 22 68434.0 23 58287.0 24 66342.0 25 74397.0 26 74397.0 27 83678.5 28 92960.0 29 101769.5 30 110579.0 31 123119.5 32 135660.0 33 135660.0 34 150081.0 35 164502.0 36 178120.5 37 191739.0 38 201216.5 39 210694.0 40 210694.0 41 216050.0 42 221406.0 43 230384.5 44 239363.0 45 246695.5 46 254028.0 47 254028.0 48 296502.5 49 338977.0 50 324571.0 51 310165.0 52 291644.0 53 273123.0 54 273123.0 55 254985.5 56 236848.0 57 211992.5 58 187137.0 59 170993.0 60 154849.0 61 154849.0 62 137538.0 63 120227.0 64 105879.0 65 91531.0 66 78952.5 67 66374.0 68 66374.0 69 56594.5 70 46815.0 71 39026.5 72 31238.0 73 25466.0 74 19694.0 75 19694.0 76 15614.5 77 11535.0 78 8937.5 79 6340.0 80 4885.5 81 3431.0 82 3431.0 83 2594.0 84 1757.0 85 1283.0 86 809.0 87 637.0 88 465.0 89 465.0 90 358.5 91 252.0 92 174.5 93 97.0 94 62.5 95 28.0 96 28.0 97 18.0 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3937179.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.85105107073143 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43623242248763 43.023097904016296 2 12.468530448436383 13.678240008083076 3 4.104265600854923 6.753698462410189 4 1.8081935935985967 3.9672527659298407 5 0.9126739049361267 2.5030561485287683 6 0.5282579984886732 1.738530387217475 7 0.32477187272664565 1.246985500408643 8 0.2161991443218127 0.9487000245315347 9 0.1633134693954608 0.8062123905313878 >10 0.890457956049992 9.182622924947994 >50 0.08526015844152653 3.2267717241190637 >100 0.05475260349138525 5.702457772020025 >500 0.004217419872597789 1.5600787584182831 >1k 0.0024562994453078825 2.375402272890873 >5k 2.3172636276489435E-4 0.7302653071213046 >10k+ 1.8538109021191547E-4 2.556627648825281 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32567 0.8271658464093199 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31022 0.7879245520714198 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23560 0.5983979900329652 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13423 0.34092938116351834 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6889 0.1749729946238157 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5952 0.15117422906095965 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5531 0.14048129384008193 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5267 0.13377598529302326 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5088 0.12922958290694936 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4717 0.11980659248665096 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 2 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 3 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 4 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 5 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 6 2.539889601158596E-5 0.0 0.0 0.0 2.539889601158596E-5 7 2.539889601158596E-5 0.0 2.539889601158596E-5 2.539889601158596E-5 2.539889601158596E-5 8 2.539889601158596E-5 0.0 2.539889601158596E-5 5.079779202317192E-5 2.539889601158596E-5 9 2.539889601158596E-5 0.0 2.539889601158596E-5 1.5239337606951577E-4 2.539889601158596E-5 10 2.539889601158596E-5 0.0 2.539889601158596E-5 2.2859006410427365E-4 2.539889601158596E-5 11 2.539889601158596E-5 0.0 2.539889601158596E-5 2.539889601158596E-4 2.539889601158596E-5 12 2.539889601158596E-5 0.0 2.539889601158596E-5 4.317812321969613E-4 2.539889601158596E-5 13 2.539889601158596E-5 0.0 2.539889601158596E-5 4.571801282085473E-4 2.539889601158596E-5 14 2.539889601158596E-5 0.0 2.539889601158596E-5 5.841746082664771E-4 2.539889601158596E-5 15 2.539889601158596E-5 0.0 2.539889601158596E-5 7.365679843359929E-4 2.539889601158596E-5 16 2.539889601158596E-5 0.0 2.539889601158596E-5 0.0012191470085561261 2.539889601158596E-5 17 2.539889601158596E-5 0.0 2.539889601158596E-5 0.0018287205128341892 2.539889601158596E-5 18 5.079779202317192E-5 0.0 2.539889601158596E-5 0.0021589061609848066 2.539889601158596E-5 19 5.079779202317192E-5 0.0 2.539889601158596E-5 0.002590687393181768 2.539889601158596E-5 20 5.079779202317192E-5 0.0 2.539889601158596E-5 0.004851189138212918 2.539889601158596E-5 21 5.079779202317192E-5 0.0 2.539889601158596E-5 0.008076848931684335 2.539889601158596E-5 22 5.079779202317192E-5 0.0 2.539889601158596E-5 0.01214067229353809 2.539889601158596E-5 23 5.079779202317192E-5 0.0 2.539889601158596E-5 0.015620321047125366 2.539889601158596E-5 24 5.079779202317192E-5 0.0 2.539889601158596E-5 0.02143666823377855 2.539889601158596E-5 25 5.079779202317192E-5 0.0 2.539889601158596E-5 0.02636405406002623 2.539889601158596E-5 26 5.079779202317192E-5 0.0 2.539889601158596E-5 0.035685448896278275 2.539889601158596E-5 27 5.079779202317192E-5 0.0 2.539889601158596E-5 0.09115663778558201 2.539889601158596E-5 28 5.079779202317192E-5 0.0 2.539889601158596E-5 0.19762880986615036 5.079779202317192E-5 29 5.079779202317192E-5 0.0 2.539889601158596E-5 0.3274679662773778 5.079779202317192E-5 30 5.079779202317192E-5 0.0 2.539889601158596E-5 0.5035839112217149 5.079779202317192E-5 31 5.079779202317192E-5 0.0 2.539889601158596E-5 0.7334439201265678 5.079779202317192E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9730 0.0 23.405447 1 GTATTGG 1035 0.0 16.444445 1 TATACTG 500 0.0 15.91 5 GTATCAA 14730 0.0 15.435506 2 TTGGACC 1515 0.0 14.653466 4 ATTGGAC 1220 0.0 14.557376 3 GGACCCT 1480 0.0 14.25 6 TGGACCC 1550 0.0 13.8451605 5 CTAATAC 740 0.0 13.75 3 TAATACT 980 0.0 13.591836 4 AATACTG 1150 0.0 13.352173 5 TATACCG 195 1.0280928E-8 13.282052 5 GACCCTC 1425 0.0 12.982456 7 GTATTAG 815 0.0 12.484662 1 ATACTGG 900 0.0 12.333333 6 TCTATAC 435 0.0 12.333333 3 TAGACAG 595 0.0 12.12605 5 TTAACGG 385 0.0 12.012986 35 TATACAG 560 0.0 11.892857 5 TGTACTG 1170 0.0 11.8589735 5 >>END_MODULE