##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088695_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1734671 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53683782111997 31.0 31.0 34.0 30.0 34.0 2 31.74255291060956 31.0 31.0 34.0 30.0 34.0 3 31.818029470718077 31.0 31.0 34.0 30.0 34.0 4 35.541176395985175 37.0 35.0 37.0 33.0 37.0 5 35.41980006583381 37.0 35.0 37.0 33.0 37.0 6 35.46638815083667 37.0 35.0 37.0 33.0 37.0 7 35.32634257447089 37.0 35.0 37.0 32.0 37.0 8 35.35830483129077 37.0 35.0 37.0 33.0 37.0 9 36.94660658995279 39.0 37.0 39.0 33.0 39.0 10 36.7598230442545 39.0 37.0 39.0 32.0 39.0 11 36.85046559261093 39.0 37.0 39.0 32.0 39.0 12 36.70082223084378 39.0 35.0 39.0 32.0 39.0 13 36.746391102405006 39.0 35.0 39.0 32.0 39.0 14 37.71771995957735 40.0 37.0 41.0 32.0 41.0 15 37.733170728051604 39.0 37.0 41.0 32.0 41.0 16 37.62006858937516 39.0 36.0 41.0 32.0 41.0 17 37.648012216725824 39.0 36.0 41.0 32.0 41.0 18 37.611930446753306 39.0 36.0 41.0 32.0 41.0 19 37.66337766642781 39.0 37.0 41.0 32.0 41.0 20 37.54297097259365 39.0 36.0 41.0 32.0 41.0 21 37.485146174692495 39.0 36.0 41.0 32.0 41.0 22 37.348468960396524 39.0 36.0 41.0 31.0 41.0 23 37.17223900094024 39.0 36.0 41.0 31.0 41.0 24 37.02097919432561 39.0 36.0 41.0 31.0 41.0 25 37.20259634247647 39.0 36.0 41.0 31.0 41.0 26 37.079979431258145 39.0 36.0 41.0 31.0 41.0 27 36.976494101763386 39.0 36.0 41.0 31.0 41.0 28 36.80299203710675 39.0 35.0 41.0 30.0 41.0 29 36.68891853267853 39.0 35.0 40.0 30.0 41.0 30 36.49840805547565 39.0 35.0 40.0 30.0 41.0 31 36.352346352708956 38.0 35.0 40.0 30.0 41.0 32 36.178682874158845 38.0 35.0 40.0 30.0 41.0 33 36.049510252952864 38.0 35.0 40.0 29.0 41.0 34 35.86166886977416 38.0 35.0 40.0 28.0 41.0 35 35.73210770226746 38.0 35.0 40.0 27.0 41.0 36 35.53984300192947 38.0 34.0 40.0 27.0 41.0 37 35.47393597979098 38.0 34.0 40.0 26.0 41.0 38 35.28532211583637 38.0 34.0 40.0 25.0 41.0 39 35.19669551171375 38.0 34.0 40.0 25.0 41.0 40 35.03242805119818 38.0 34.0 40.0 24.0 41.0 41 34.91228365494091 38.0 34.0 40.0 24.0 41.0 42 34.64849818784081 38.0 33.0 40.0 23.0 41.0 43 34.2943111402681 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 4.0 15 4.0 16 23.0 17 54.0 18 136.0 19 284.0 20 623.0 21 1279.0 22 2407.0 23 4286.0 24 6919.0 25 10564.0 26 15536.0 27 21549.0 28 29265.0 29 37998.0 30 48276.0 31 59712.0 32 73290.0 33 89657.0 34 109724.0 35 135175.0 36 173213.0 37 237573.0 38 319401.0 39 357715.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.11154218869169 21.601444884937834 13.884765468495178 23.402247457875298 2 18.918342440727955 23.553227096089113 34.844763070345905 22.68366739283703 3 19.587864211715075 24.71817422439183 32.700667734688594 22.9932938292045 4 13.705653694562253 16.625458083982494 36.62948190175543 33.039406319699815 5 12.564399819908212 38.61602574782192 35.17076148733679 13.648812944933072 6 32.08798671333066 37.62673152430634 13.94074150083791 16.344540261525093 7 25.893382664493732 33.112273163037834 21.884207437606324 19.110136734862117 8 26.736654962237793 34.60321870833143 19.336404424816003 19.323721904614764 9 24.596479678279053 14.382150851660056 21.9145301904511 39.106839279609794 10 16.040563311429086 27.93734373838036 34.067958708020136 21.95413424217042 11 32.88940669441064 22.756707179632336 23.634279929738838 20.719606196218187 12 20.750851314168507 27.374355137083633 31.320175410783946 20.554618137963914 13 31.019714977652825 21.24696844531326 26.386905643779134 21.346410933254777 14 20.393261892312722 23.094119864804334 28.066244261880207 28.446373981002736 15 22.654324652916895 29.75889952619257 25.56680776931188 22.019968051578655 16 21.67171757641651 28.519010233064368 26.833099763586294 22.97617242693283 17 21.416741272552546 27.257445359955867 27.36392088182716 23.96189248566443 18 22.53401365446243 26.13423525267904 29.62452245987856 21.707228632979973 19 22.45572791612934 25.321516299056135 30.771195229527677 21.451560555286854 20 23.29732842711961 25.06261994349361 30.486587946648097 21.153463682738685 21 22.254133492748768 25.838444292894735 30.970599035782577 20.93682317857392 22 21.1133408006475 26.176318160619505 30.607590718931714 22.102750319801277 23 21.98088283023121 26.337789701908893 31.15190142684117 20.529426041018727 24 21.86501071384718 26.445706419257597 29.212225257700165 22.477057609195057 25 21.81745126309254 26.580256429028903 30.299751364956233 21.302540942922317 26 21.587436464897376 27.319647356761024 30.097176928651027 20.995739249690576 27 20.674756192961084 27.281542148338218 29.88013288975258 22.163568768948117 28 21.120777369310954 26.87541326280315 30.041489135403776 21.962320232482124 29 21.390857401778206 26.80329584111339 29.530844753846697 22.27500200326171 30 21.396968070602437 27.11672703354123 30.769696386231164 20.716608509625168 31 22.141143767319566 26.832407989757133 30.517371882045648 20.509076360877653 32 21.542817052916664 26.71232758257906 29.80870724189198 21.936148122612302 33 21.27838650672087 26.715959395182143 30.316065697760553 21.689588400336433 34 20.678388005564166 27.098510322706726 30.913988877429784 21.309112794299324 35 20.391590105558922 28.775600675863032 29.825079222515395 21.007729996062654 36 22.178268962817732 27.02783409649438 29.5806524695461 21.213244471141792 37 21.32709891385744 27.44405135037134 29.78288101893673 21.44596871683449 38 21.200561950940553 26.31594117847131 30.768889316763815 21.71460755382433 39 20.750736018530315 26.10760196025644 31.455301898746217 21.686360122467025 40 19.886998745006977 26.62966060999463 31.074192166699042 22.409148478299343 41 21.109363101129837 25.607795368689512 31.158876812951853 22.1239647172288 42 19.996414305652195 27.349681870510317 30.52198370757337 22.131920116264123 43 20.33607525576896 27.0473767071681 29.9696023049904 22.64694573207254 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 640.0 1 565.0 2 490.0 3 882.0 4 1274.0 5 1274.0 6 2083.5 7 2893.0 8 3102.0 9 3311.0 10 5110.0 11 6909.0 12 6909.0 13 12895.0 14 18881.0 15 29612.0 16 40343.0 17 37617.5 18 34892.0 19 34892.0 20 37535.0 21 40178.0 22 33220.0 23 26262.0 24 29570.0 25 32878.0 26 32878.0 27 36942.0 28 41006.0 29 44581.0 30 48156.0 31 52988.0 32 57820.0 33 57820.0 34 64491.0 35 71162.0 36 77489.5 37 83817.0 38 88181.0 39 92545.0 40 92545.0 41 94511.5 42 96478.0 43 100868.0 44 105258.0 45 110253.5 46 115249.0 47 115249.0 48 143753.5 49 172258.0 50 160607.5 51 148957.0 52 135818.5 53 122680.0 54 122680.0 55 110683.5 56 98687.0 57 85537.0 58 72387.0 59 64881.5 60 57376.0 61 57376.0 62 50392.5 63 43409.0 64 37815.0 65 32221.0 66 27501.0 67 22781.0 68 22781.0 69 19510.0 70 16239.0 71 13566.0 72 10893.0 73 8991.5 74 7090.0 75 7090.0 76 5652.5 77 4215.0 78 3279.5 79 2344.0 80 1805.5 81 1267.0 82 1267.0 83 971.0 84 675.0 85 539.5 86 404.0 87 282.0 88 160.0 89 160.0 90 136.0 91 112.0 92 77.5 93 43.0 94 31.5 95 20.0 96 20.0 97 15.5 98 11.0 99 5.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1734671.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.30645460028262 #Duplication Level Percentage of deduplicated Percentage of total 1 82.55069884799214 46.481371769060715 2 10.478546452921101 11.80019600256709 3 3.0276580256861125 5.114300675054291 4 1.1822204264288345 2.6626656307296765 5 0.6485435465034376 1.8258593878751044 6 0.39087381897634904 1.3205231365578531 7 0.26264056300053545 1.0351851255747622 8 0.19043261849463042 0.8578068470144677 9 0.14691172985799872 0.7444870782748549 >10 0.9701729831128248 10.474188159997638 >50 0.08943029118662547 3.51496260705831 >100 0.053970480512459146 5.6562541744637755 >500 0.00471960915639992 1.8957978601228238 >1k 0.0027702053744086486 3.2276975329998256 >5k 1.0260019905217217E-4 0.4248445107064617 >10k+ 3.078005971565165E-4 2.9638595019423866 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19465 1.1221147987139923 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17710 1.0209428761995791 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14129 0.8145060360148985 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7354 0.42394206163589526 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4743 0.2734236059748506 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4211 0.2427549662154956 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3797 0.21888876910953142 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3686 0.21248986118981641 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3410 0.1965790631191736 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3404 0.1962331762045944 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2298 0.1324746882838302 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2189 0.12619107600230822 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2143 0.12353927632386777 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2008 0.11575682074583596 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1974 0.11379679489655387 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1947 0.1122403037809475 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1766 0.10180604852447525 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.152956381930637E-4 0.0 5 5.764781909653185E-5 0.0 0.0 1.152956381930637E-4 0.0 6 5.764781909653185E-5 0.0 0.0 1.152956381930637E-4 0.0 7 5.764781909653185E-5 0.0 0.0 1.152956381930637E-4 0.0 8 5.764781909653185E-5 0.0 0.0 1.152956381930637E-4 0.0 9 5.764781909653185E-5 0.0 0.0 2.305912763861274E-4 0.0 10 5.764781909653185E-5 0.0 0.0 2.8823909548265924E-4 0.0 11 5.764781909653185E-5 0.0 0.0 4.611825527722548E-4 0.0 12 5.764781909653185E-5 0.0 0.0 6.917738291583822E-4 0.0 13 5.764781909653185E-5 0.0 0.0 6.917738291583822E-4 0.0 14 5.764781909653185E-5 0.0 0.0 8.647172864479777E-4 0.0 15 5.764781909653185E-5 0.0 0.0 0.001152956381930637 0.0 16 5.764781909653185E-5 0.0 0.0 0.0016141389347028917 0.0 17 5.764781909653185E-5 0.0 0.0 0.002305912763861274 0.0 18 5.764781909653185E-5 0.0 0.0 0.0029976865930196562 0.0 19 5.764781909653185E-5 0.0 0.0 0.0036318126030815065 0.0 20 5.764781909653185E-5 0.0 0.0 0.0058800775478462484 0.0 21 5.764781909653185E-5 0.0 0.0 0.010491903075568796 0.0 22 5.764781909653185E-5 0.0 0.0 0.016371980623415047 0.0 23 5.764781909653185E-5 0.0 0.0 0.019715554131013894 0.0 24 5.764781909653185E-5 0.0 0.0 0.02640270114621159 0.0 25 5.764781909653185E-5 0.0 0.0 0.031129822312127197 0.0 26 5.764781909653185E-5 0.0 0.0 0.039488756081124315 0.0 27 5.764781909653185E-5 0.0 0.0 0.08704820683576309 0.0 28 5.764781909653185E-5 0.0 0.0 0.1894883813703002 0.0 29 5.764781909653185E-5 5.764781909653185E-5 0.0 0.3169477093927321 0.0 30 5.764781909653185E-5 5.764781909653185E-5 0.0 0.489602927586845 0.0 31 5.764781909653185E-5 5.764781909653185E-5 0.0 0.6952903461232707 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5810 0.0 23.626507 1 GTATTGG 590 0.0 19.440678 1 ATTGGAC 590 0.0 19.12712 3 TACGTTA 60 9.239398E-4 18.5 19 CGCGCTA 50 0.0070362934 18.499998 14 TTGGACC 755 0.0 17.887415 4 ACGTTAA 65 0.0015803721 17.076923 20 CGTTTAT 135 2.2213499E-8 16.444445 27 TCACGTT 125 1.6590275E-7 16.279999 24 TAGGTCG 80 3.3838072E-4 16.1875 21 TGGACCC 805 0.0 15.857143 5 CGCTCTA 70 0.0025932067 15.857143 14 ACGTTTA 130 2.5909867E-7 15.653846 26 GTATCAA 8845 0.0 15.519503 2 GGACCCT 800 0.0 15.493749 6 TAGGACC 295 0.0 15.050847 4 ATTACGT 75 0.0041055256 14.8 17 GACCCTC 790 0.0 14.753164 7 TAATACT 440 0.0 14.715909 4 TATACTG 245 0.0 14.346938 5 >>END_MODULE