##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088694_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 724040 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.613050383956686 31.0 31.0 34.0 30.0 34.0 2 31.82230954090934 31.0 31.0 34.0 30.0 34.0 3 31.90342798740401 31.0 31.0 34.0 30.0 34.0 4 35.61176868681288 37.0 35.0 37.0 33.0 37.0 5 35.49087343240705 37.0 35.0 37.0 33.0 37.0 6 35.53477570299984 37.0 35.0 37.0 33.0 37.0 7 35.4 37.0 35.0 37.0 33.0 37.0 8 35.42394895309651 37.0 35.0 37.0 33.0 37.0 9 37.033024418540414 39.0 37.0 39.0 33.0 39.0 10 36.84835368211701 39.0 37.0 39.0 32.0 39.0 11 36.93389315507431 39.0 37.0 39.0 33.0 39.0 12 36.804321584442846 39.0 37.0 39.0 32.0 39.0 13 36.83711811502127 39.0 37.0 39.0 32.0 39.0 14 37.843086017347105 40.0 37.0 41.0 32.0 41.0 15 37.85200679520469 40.0 37.0 41.0 32.0 41.0 16 37.73838185735595 40.0 37.0 41.0 32.0 41.0 17 37.75621788851445 39.0 37.0 41.0 32.0 41.0 18 37.714083476051044 39.0 37.0 41.0 32.0 41.0 19 37.75350118777968 40.0 37.0 41.0 32.0 41.0 20 37.624447544334565 39.0 37.0 41.0 32.0 41.0 21 37.57013010330921 39.0 37.0 41.0 32.0 41.0 22 37.439083476051046 39.0 36.0 41.0 32.0 41.0 23 37.26828075796917 39.0 36.0 41.0 31.0 41.0 24 37.118192365062704 39.0 36.0 41.0 31.0 41.0 25 37.3065493619137 39.0 36.0 41.0 31.0 41.0 26 37.195005800784486 39.0 36.0 41.0 31.0 41.0 27 37.08071101044141 39.0 36.0 41.0 31.0 41.0 28 36.920324843931276 39.0 36.0 41.0 30.0 41.0 29 36.812964753328544 39.0 35.0 41.0 30.0 41.0 30 36.62582868349815 39.0 35.0 40.0 30.0 41.0 31 36.4818946467046 39.0 35.0 40.0 30.0 41.0 32 36.31554334014695 38.0 35.0 40.0 30.0 41.0 33 36.18079525993039 38.0 35.0 40.0 30.0 41.0 34 36.00323186564278 38.0 35.0 40.0 29.0 41.0 35 35.870177062040774 38.0 35.0 40.0 28.0 41.0 36 35.6791185569858 38.0 35.0 40.0 27.0 41.0 37 35.61912463399812 38.0 35.0 40.0 27.0 41.0 38 35.437187171979446 38.0 34.0 40.0 26.0 41.0 39 35.35651345229545 38.0 34.0 40.0 25.0 41.0 40 35.21024252803713 38.0 34.0 40.0 25.0 41.0 41 35.08210596099663 38.0 34.0 40.0 24.0 41.0 42 34.82958952544058 38.0 34.0 40.0 23.0 41.0 43 34.48334069940887 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 3.0 14 0.0 15 1.0 16 8.0 17 28.0 18 32.0 19 138.0 20 247.0 21 478.0 22 934.0 23 1633.0 24 2642.0 25 4126.0 26 5904.0 27 8464.0 28 11284.0 29 15204.0 30 19131.0 31 23801.0 32 29611.0 33 36610.0 34 45320.0 35 55422.0 36 71207.0 37 98436.0 38 135730.0 39 157645.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.48127175294183 21.2470305507983 13.455057731617037 23.81663996464284 2 18.814153914148392 23.195127341030883 34.860643058394565 23.130075686426164 3 19.772388265841666 24.77915584774322 32.26078669686758 23.187669189547538 4 13.694685376498535 16.5649687862549 36.69590077896249 33.04444505828407 5 12.748052593779349 38.468178553671066 35.20454671012651 13.57922214242307 6 32.28882382188829 37.29724877078615 14.17725540025413 16.23667200707143 7 26.108778520523728 32.79998342633004 22.065493619137065 19.02574443400917 8 26.54991436937186 34.63786531130877 19.53055079829844 19.281669521020937 9 24.645599690624827 14.523921330313241 21.84741174520745 38.983067233854484 10 16.177144909121044 27.630931992707588 34.27103474946136 21.920888348710015 11 32.834650019335946 22.77429423788741 23.602977736036685 20.78807800673996 12 20.576763714711895 27.08206728910005 31.573393735152756 20.7677752610353 13 30.842356775868733 21.29854704159991 26.226451577260924 21.632644605270425 14 20.339345892492126 23.028147616153806 27.9372686591901 28.69523783216397 15 22.770841389978454 29.74131263466107 25.360891663444008 22.12695431191647 16 21.799348102314788 28.5199712723054 26.913015855477596 22.767664769902215 17 21.36870891110988 27.29987293519695 27.366443842881612 23.964974310811556 18 22.467128887906746 26.384730125407437 29.303905861554608 21.84423512513121 19 22.457460913761672 25.633804762167834 30.411993812496547 21.496740511573947 20 23.30119882879399 25.359648638196784 30.174161648527704 21.164990884481522 21 22.15236727252638 26.14966023976576 30.576625600795538 21.121346886912328 22 21.24095353847854 26.368294569360806 30.268493453400364 22.12225843876029 23 21.862051820341417 26.50488923263908 30.81942986575327 20.813629081266228 24 21.92075023479366 26.628224959946966 28.970636981382242 22.480387823877134 25 21.966604055024586 26.946853764985363 29.729849179603335 21.35669300038672 26 21.704740069609414 27.224600850781727 29.76824484835092 21.30241423125794 27 20.874813546212916 27.356775868736534 29.543809734268823 22.224600850781727 28 21.25393624661621 26.949616043312524 29.744351140820953 22.052096569250317 29 21.50116015689741 26.839401138058673 29.362051820341417 22.2973868847025 30 21.52892105408541 27.17612286613999 30.366554334014694 20.928401745759903 31 22.1384177669742 26.932628031600466 30.066156565935582 20.862797635489752 32 21.698110601624222 26.80846362079443 29.490359648638197 22.003066128943154 33 21.188470250262416 26.988978509474613 29.919893928512238 21.90265731175073 34 20.85837799016629 27.157201259598917 30.56654328490139 21.417877465333408 35 20.636428926578642 28.694547262582176 29.49892271145241 21.170101099386773 36 22.22957295177062 27.01411524225181 29.309568532125297 21.446743273852274 37 21.429340920391137 27.393652284404173 29.527097950389482 21.649908844815204 38 21.329898900613227 26.41925860449699 30.406469255842218 21.844373239047567 39 20.850367383017513 26.258079664106955 31.084056129495607 21.807496823379925 40 20.198055356057676 26.530854648914428 30.69678470802718 22.57430528700072 41 21.20697751505442 25.871498812220317 30.70092812551793 22.220595547207335 42 20.17374730677863 27.318932655654383 30.199160267388542 22.30815977017844 43 20.570962930224848 26.957074194795865 29.624192033589303 22.847770841389977 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 211.0 1 214.0 2 217.0 3 402.0 4 587.0 5 587.0 6 865.5 7 1144.0 8 1253.0 9 1362.0 10 2035.0 11 2708.0 12 2708.0 13 5154.5 14 7601.0 15 11433.5 16 15266.0 17 14245.5 18 13225.0 19 13225.0 20 14641.0 21 16057.0 22 13530.5 23 11004.0 24 12373.5 25 13743.0 26 13743.0 27 15498.0 28 17253.0 29 18912.5 30 20572.0 31 22834.0 32 25096.0 33 25096.0 34 27786.0 35 30476.0 36 32954.5 37 35433.0 38 37103.0 39 38773.0 40 38773.0 41 39582.5 42 40392.0 43 42322.5 44 44253.0 45 46302.5 46 48352.0 47 48352.0 48 59214.5 49 70077.0 50 65769.5 51 61462.0 52 56142.5 53 50823.0 54 50823.0 55 46155.0 56 41487.0 57 35940.0 58 30393.0 59 27368.5 60 24344.0 61 24344.0 62 21556.0 63 18768.0 64 16271.0 65 13774.0 66 11825.0 67 9876.0 68 9876.0 69 8480.5 70 7085.0 71 5980.0 72 4875.0 73 3952.0 74 3029.0 75 3029.0 76 2495.0 77 1961.0 78 1512.5 79 1064.0 80 843.0 81 622.0 82 622.0 83 495.0 84 368.0 85 262.0 86 156.0 87 117.0 88 78.0 89 78.0 90 60.5 91 43.0 92 29.0 93 15.0 94 10.5 95 6.0 96 6.0 97 7.0 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 724040.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.43324069389153 #Duplication Level Percentage of deduplicated Percentage of total 1 87.29312979294639 57.11872372664975 2 7.6911998499612455 10.065202620146733 3 2.009771368221724 3.9451756102963134 4 0.8497813260884832 2.224157841884882 5 0.4911848121870008 1.6069907020507965 6 0.3151731278127821 1.2373679479452246 7 0.21048221170606637 0.9640773254241973 8 0.15524375155854778 0.8126481409562524 9 0.12969029633792734 0.7637450738347545 >10 0.7587669490243418 9.097396240369413 >50 0.058066640617841045 2.6324582413295143 >100 0.03263570918051317 4.053353085078796 >500 0.0027549624627027595 1.2529882136240618 >1k 0.0014834413260707167 1.6007631626910328 >5k 6.357605683160214E-4 2.6249520677184033 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6957 0.9608585161040826 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6827 0.942903706977515 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5146 0.7107342135793603 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2912 0.4021877244351141 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1856 0.2563394287608419 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1498 0.20689464670460195 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1455 0.20095574830119883 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1351 0.18659190099994477 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1258 0.173747306778631 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1214 0.16767029445886966 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 824 0.11380586707916689 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 803 0.11090547483564445 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 800 0.1104911330865698 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 783 0.10814319650848019 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 760 0.1049665764322413 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 733 0.10123750069056958 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 1.3811391635821225E-4 0.0 0.0 8 0.0 0.0 1.3811391635821225E-4 0.0 0.0 9 0.0 0.0 1.3811391635821225E-4 0.0 0.0 10 0.0 0.0 1.3811391635821225E-4 0.0 0.0 11 0.0 0.0 1.3811391635821225E-4 1.3811391635821225E-4 0.0 12 0.0 0.0 1.3811391635821225E-4 1.3811391635821225E-4 0.0 13 0.0 0.0 1.3811391635821225E-4 2.762278327164245E-4 0.0 14 0.0 0.0 1.3811391635821225E-4 2.762278327164245E-4 0.0 15 0.0 0.0 1.3811391635821225E-4 4.143417490746368E-4 0.0 16 0.0 0.0 1.3811391635821225E-4 0.001104911330865698 0.0 17 0.0 0.0 1.3811391635821225E-4 0.002624164410806033 0.0 18 0.0 0.0 1.3811391635821225E-4 0.0031766200762388818 0.0 19 0.0 0.0 1.3811391635821225E-4 0.004557759239821004 0.0 20 0.0 0.0 1.3811391635821225E-4 0.00552455665432849 0.0 21 0.0 0.0 1.3811391635821225E-4 0.009667974145074858 0.0 22 0.0 0.0 1.3811391635821225E-4 0.015054416883045136 0.0 23 0.0 0.0 1.3811391635821225E-4 0.019335948290149715 0.0 24 0.0 0.0 1.3811391635821225E-4 0.026517871940776754 0.0 25 0.0 0.0 1.3811391635821225E-4 0.03079940334788133 0.0 26 0.0 0.0 1.3811391635821225E-4 0.040053035743881554 0.0 27 0.0 0.0 1.3811391635821225E-4 0.09060272913098724 0.0 28 0.0 0.0 1.3811391635821225E-4 0.1836915087564223 0.0 29 0.0 0.0 1.3811391635821225E-4 0.3063366664825148 0.0 30 0.0 0.0 1.3811391635821225E-4 0.46972542953427987 0.0 31 0.0 0.0 1.3811391635821225E-4 0.65590298878515 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2155 0.0 23.522043 1 GTCTAAC 85 1.244005E-6 19.588236 1 CTATCCT 70 1.2184065E-4 18.5 4 CGCCGAT 50 0.0070324293 18.5 37 GTATTGG 270 0.0 17.814816 1 CTAACCT 75 2.0659348E-4 17.266666 33 ATTTCGG 75 2.0659348E-4 17.266666 29 TTCGGTT 65 0.0015791707 17.076923 31 ACGGTGT 65 0.0015791707 17.076923 29 CTCTAAT 165 5.4569682E-11 16.818182 1 GTATTAT 90 4.4423025E-5 16.444445 1 ATATACT 125 1.6551166E-7 16.279999 4 GGCGTTT 70 0.0025912512 15.857142 26 ACGGGAC 70 0.0025912512 15.857142 3 CTAATAC 190 2.7284841E-11 15.578948 3 TTGGACC 300 0.0 15.416667 4 TTAGCCT 120 1.9329946E-6 15.416667 4 GTAGACC 85 5.360746E-4 15.235294 4 TCTAATA 170 1.4824764E-9 15.235294 2 GAGGTGT 110 1.4503134E-5 15.136364 6 >>END_MODULE