##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088693_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2550538 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.569438683132734 31.0 31.0 34.0 30.0 34.0 2 31.773839872215195 31.0 31.0 34.0 30.0 34.0 3 31.854158220736174 31.0 31.0 34.0 30.0 34.0 4 35.57395028029381 37.0 35.0 37.0 33.0 37.0 5 35.44484065714763 37.0 35.0 37.0 33.0 37.0 6 35.484324483697165 37.0 35.0 37.0 33.0 37.0 7 35.35309609188336 37.0 35.0 37.0 33.0 37.0 8 35.378048082404575 37.0 35.0 37.0 33.0 37.0 9 36.97811010853396 39.0 37.0 39.0 33.0 39.0 10 36.78553583596872 39.0 37.0 39.0 32.0 39.0 11 36.88040562422516 39.0 37.0 39.0 33.0 39.0 12 36.73590120986239 39.0 35.0 39.0 32.0 39.0 13 36.77179128481912 39.0 37.0 39.0 32.0 39.0 14 37.76664452754674 40.0 37.0 41.0 32.0 41.0 15 37.781533151045 40.0 37.0 41.0 32.0 41.0 16 37.6649620589852 39.0 36.0 41.0 32.0 41.0 17 37.679289232310985 39.0 37.0 41.0 32.0 41.0 18 37.62620160922911 39.0 36.0 41.0 32.0 41.0 19 37.673202673318336 39.0 37.0 41.0 32.0 41.0 20 37.54955229053635 39.0 36.0 41.0 32.0 41.0 21 37.48170621257162 39.0 36.0 41.0 32.0 41.0 22 37.344794706058096 39.0 36.0 41.0 31.0 41.0 23 37.164772687174235 39.0 36.0 41.0 31.0 41.0 24 37.00850448023123 39.0 36.0 41.0 31.0 41.0 25 37.20055807833484 39.0 36.0 41.0 31.0 41.0 26 37.07768557065215 39.0 36.0 41.0 31.0 41.0 27 36.966711336980666 39.0 36.0 41.0 31.0 41.0 28 36.803673577888276 39.0 35.0 41.0 30.0 41.0 29 36.694027299338416 39.0 35.0 41.0 30.0 41.0 30 36.50270923232667 39.0 35.0 40.0 30.0 41.0 31 36.36381931968863 39.0 35.0 40.0 30.0 41.0 32 36.18997678136926 38.0 35.0 40.0 30.0 41.0 33 36.05708991593146 38.0 35.0 40.0 29.0 41.0 34 35.87798339017102 38.0 35.0 40.0 28.0 41.0 35 35.74507378443293 38.0 35.0 40.0 27.0 41.0 36 35.551628323122415 38.0 34.0 40.0 27.0 41.0 37 35.49832113852058 38.0 34.0 40.0 26.0 41.0 38 35.316726902324135 38.0 34.0 40.0 25.0 41.0 39 35.233629532279075 38.0 34.0 40.0 25.0 41.0 40 35.0783677796606 38.0 34.0 40.0 24.0 41.0 41 34.95407910017416 38.0 34.0 40.0 24.0 41.0 42 34.71241047967135 38.0 33.0 40.0 23.0 41.0 43 34.36480617030603 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 6.0 14 6.0 15 19.0 16 35.0 17 81.0 18 189.0 19 410.0 20 975.0 21 1950.0 22 3745.0 23 6226.0 24 10065.0 25 15699.0 26 22425.0 27 31622.0 28 42631.0 29 55497.0 30 70443.0 31 86682.0 32 107264.0 33 131387.0 34 159661.0 35 197246.0 36 252406.0 37 344748.0 38 472191.0 39 536927.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.33037813982776 21.2402638188492 13.45919958847898 23.970158452844068 2 18.768040311495067 23.110692724436962 35.0375097332406 23.083757230827377 3 19.644365228042084 24.77626289041763 32.13823906956101 23.441132811979276 4 13.818574747759099 16.53733447609877 36.386676065990784 33.25741471015135 5 12.839016709415818 38.491016405166285 34.943764805699814 13.726202079718083 6 32.406927479614104 37.14502587297268 14.111297302765141 16.336749344648073 7 26.231171619477927 32.70090467187707 21.97434423639248 19.09357947225252 8 26.71205055560827 34.80865605609483 19.29890870083096 19.18038468746594 9 24.786888099687204 14.420094897625521 21.668447990188735 39.12456901249854 10 16.26386276150365 27.576966114600136 34.118644772201 22.04052635169521 11 33.36899901118901 22.49497949060159 23.32966613318445 20.80635536502495 12 20.809060676610187 26.97701426130487 31.130059618794153 21.08386544329079 13 31.12425692148088 21.076690486477755 26.18439717424324 21.614655417798126 14 20.535863413915028 22.685017827611272 27.73156094910172 29.04755780937198 15 22.96186137983437 29.301582646484782 25.43831928793063 22.298236685750222 16 21.890950066221322 28.33304189155386 26.620344413609992 23.155663628614825 17 21.627789901581547 27.012144104498738 27.264443815383267 24.09562217853645 18 22.677176344755498 26.141661092679268 29.122757629958855 22.058404932606376 19 22.912499245257276 25.32328473443642 30.150776032350823 21.61343998795548 20 23.556441817373432 25.0540866279977 29.87699065844147 21.51248089618739 21 22.395902354718885 25.760604233302935 30.602837518986192 21.240655892991988 22 21.56976292844882 25.95126988894108 30.012609104432087 22.46635807817802 23 22.260009456828325 26.238268161462404 30.723635562379386 20.778086819329882 24 22.2483648547875 26.326053562032797 28.694965532762108 22.7306160504176 25 22.24287581678846 26.430658943328822 29.67526851197669 21.651196727906033 26 22.025431497197843 26.887464527091932 29.580033702693314 21.50707027301691 27 21.251124272604446 26.94776553025283 29.38736846892695 22.413741728215772 28 21.496366648918777 26.58548902231608 29.45739291082901 22.460751417936137 29 21.685464007985765 26.686212869598492 28.999293482394695 22.62902964002105 30 21.72765118574983 26.868174479266727 30.182808489816658 21.221365845166783 31 22.435148976412037 26.59536929071435 29.97979249868067 20.989689234192944 32 21.89036195500714 26.38760920245062 29.571133619652013 22.15089522289023 33 21.550943369594965 26.55067283843644 29.952660967999694 21.945722823968904 34 21.119661812527397 26.589488178572523 30.594329510087675 21.696520498812408 35 20.82254802712212 28.289952943261383 29.498835147721774 21.388663881894722 36 22.500429321186356 26.61720782046768 29.344436350291588 21.53792650805438 37 21.601795385914656 27.024768891896535 29.454413147343818 21.919022574844995 38 21.573056351248248 25.896849997922004 30.40582026223487 22.124273388594876 39 21.175728414946178 25.59220838897519 30.972916302364446 22.25914689371419 40 20.30010923185618 26.019765241686265 30.932571873071485 22.74755365338607 41 21.362786988470667 25.31332605120959 30.778800394269755 22.545086566049985 42 20.19711135454559 26.82779084255949 30.375748175482975 22.59934962741194 43 20.453292599443724 26.680253342628102 29.80422169753989 23.06223236038828 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2122.0 1 1417.0 2 712.0 3 1485.5 4 2259.0 5 2259.0 6 3218.0 7 4177.0 8 4448.5 9 4720.0 10 7305.0 11 9890.0 12 9890.0 13 18574.5 14 27259.0 15 40416.5 16 53574.0 17 49923.0 18 46272.0 19 46272.0 20 50266.5 21 54261.0 22 44821.5 23 35382.0 24 40214.5 25 45047.0 26 45047.0 27 50119.0 28 55191.0 29 60604.0 30 66017.0 31 74176.5 32 82336.0 33 82336.0 34 91224.5 35 100113.0 36 108169.0 37 116225.0 38 123360.5 39 130496.0 40 130496.0 41 135181.0 42 139866.0 43 148876.0 44 157886.0 45 166028.5 46 174171.0 47 174171.0 48 214049.5 49 253928.0 50 239098.5 51 224269.0 52 205105.0 53 185941.0 54 185941.0 55 169581.0 56 153221.0 57 133599.0 58 113977.0 59 101372.0 60 88767.0 61 88767.0 62 78393.5 63 68020.0 64 59150.5 65 50281.0 66 42981.0 67 35681.0 68 35681.0 69 30710.0 70 25739.0 71 21386.0 72 17033.0 73 14042.5 74 11052.0 75 11052.0 76 8786.5 77 6521.0 78 5145.5 79 3770.0 80 2904.0 81 2038.0 82 2038.0 83 1574.0 84 1110.0 85 852.5 86 595.0 87 448.0 88 301.0 89 301.0 90 252.0 91 203.0 92 134.0 93 65.0 94 50.5 95 36.0 96 36.0 97 24.0 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2550538.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.19456304753915 #Duplication Level Percentage of deduplicated Percentage of total 1 80.18718198270662 42.65522107583581 2 11.362902849211313 12.088893040308665 3 3.602946830051421 5.749715469243048 4 1.5407829938652131 3.2784511243895675 5 0.8117414110252144 2.1590114833539573 6 0.5016942052366666 1.601244241862814 7 0.32633325574692346 1.2151408463136903 8 0.2417358574972284 1.0287226649989802 9 0.1771709707007928 0.8482079134023329 >10 1.0734737909580137 10.752760265417363 >50 0.102983714516036 3.759454239481514 >100 0.06277913999709493 6.2453003402296305 >500 0.004284231359611257 1.5686442374447285 >1k 0.003397838664518057 3.130648004067307 >5k 2.954642316972224E-4 0.8655794776479285 >10k+ 2.954642316972224E-4 3.0530055760028323 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 25244 0.989751966055789 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23664 0.9278042514951748 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18226 0.7145943326466808 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10565 0.41422633185625934 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6300 0.2470067099568797 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5510 0.21603285267657257 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5199 0.20383934683584404 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5020 0.19682121967992636 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4311 0.16902316295620767 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4230 0.16584736239961922 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2887 0.11319180502309709 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2853 0.11185875293761552 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2828 0.11087856758064377 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2812 0.11025124895218186 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2795 0.10958472290944106 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2778 0.10891819686670028 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2706 0.10609526303862166 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2682 0.10515428509592878 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.841482855773959E-5 0.0 5 0.0 0.0 0.0 1.1762224283660938E-4 0.0 6 0.0 0.0 0.0 1.1762224283660938E-4 0.0 7 0.0 0.0 0.0 1.1762224283660938E-4 0.0 8 0.0 0.0 0.0 1.1762224283660938E-4 0.0 9 0.0 0.0 0.0 3.1365931423095835E-4 0.0 10 7.841482855773959E-5 0.0 0.0 3.920741427886979E-4 0.0 11 1.9603707139434896E-4 0.0 0.0 5.881112141830468E-4 0.0 12 1.9603707139434896E-4 0.0 0.0 7.44940871298526E-4 0.0 13 1.9603707139434896E-4 0.0 0.0 8.625631141351354E-4 0.0 14 1.9603707139434896E-4 0.0 0.0 0.0010586001855294844 0.0 15 1.9603707139434896E-4 0.0 0.0 0.001489881742597052 0.0 16 1.9603707139434896E-4 0.0 0.0 0.002274030028174448 0.0 17 1.9603707139434896E-4 0.0 0.0 0.002979763485194104 0.0 18 1.9603707139434896E-4 0.0 0.0 0.0036462895279348907 0.0 19 1.9603707139434896E-4 0.0 0.0 0.004116778499281328 0.0 20 1.9603707139434896E-4 0.0 0.0 0.006626053013128995 0.0 21 2.3524448567321875E-4 0.0 0.0 0.010468379612458235 3.9207414278869794E-5 22 2.3524448567321875E-4 0.0 0.0 0.017760958668328015 3.9207414278869794E-5 23 2.3524448567321875E-4 0.0 0.0 0.021564077853378386 3.9207414278869794E-5 24 2.3524448567321875E-4 0.0 0.0 0.028817449494969297 3.9207414278869794E-5 25 2.3524448567321875E-4 0.0 0.0 0.03399282817978011 3.9207414278869794E-5 26 2.3524448567321875E-4 0.0 0.0 0.04316736312103564 3.9207414278869794E-5 27 2.3524448567321875E-4 0.0 0.0 0.09456828324063393 3.9207414278869794E-5 28 2.3524448567321875E-4 0.0 0.0 0.19874238297959096 3.9207414278869794E-5 29 2.3524448567321875E-4 0.0 0.0 0.326401723871591 3.9207414278869794E-5 30 2.3524448567321875E-4 0.0 0.0 0.5046386291833331 3.9207414278869794E-5 31 2.3524448567321875E-4 0.0 0.0 0.7402359815850617 7.841482855773959E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7225 0.0 23.710726 1 CGCGAAT 70 1.2199373E-4 18.5 35 GTATTGG 855 0.0 17.309942 1 CAATGCG 130 1.3953468E-8 17.076923 19 ACGTTTA 120 1.0426447E-7 16.958334 26 TGCGCTA 635 0.0 16.606298 10 GCGCTAT 645 0.0 16.348837 11 CGCTATC 685 0.0 15.934306 12 ATTGGAC 900 0.0 15.827778 3 GTATCAA 11255 0.0 15.237227 2 TAATACT 745 0.0 15.147651 4 TTGGACC 1065 0.0 15.112676 4 TTGTGCG 700 0.0 14.799999 7 GCTATCG 705 0.0 14.695036 13 GACGCGA 90 8.278891E-4 14.388888 33 TGCGACG 155 1.2118653E-7 14.322581 22 GGACCCT 1150 0.0 14.31739 6 GTGCGCT 725 0.0 14.289656 9 CTAATAC 625 0.0 14.208001 3 TATCGGT 800 0.0 14.106249 15 >>END_MODULE