##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088692_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4634562 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.586078900228326 31.0 31.0 34.0 30.0 34.0 2 31.792023496503013 31.0 31.0 34.0 30.0 34.0 3 31.87026346826302 31.0 31.0 34.0 30.0 34.0 4 35.587293038694916 37.0 35.0 37.0 33.0 37.0 5 35.46542175938093 37.0 35.0 37.0 33.0 37.0 6 35.503348536496006 37.0 35.0 37.0 33.0 37.0 7 35.372604789837744 37.0 35.0 37.0 33.0 37.0 8 35.39694754326299 37.0 35.0 37.0 33.0 37.0 9 36.998639569391884 39.0 37.0 39.0 33.0 39.0 10 36.811751142826445 39.0 37.0 39.0 32.0 39.0 11 36.900945332050796 39.0 37.0 39.0 33.0 39.0 12 36.75461240997531 39.0 37.0 39.0 32.0 39.0 13 36.790406083681695 39.0 37.0 39.0 32.0 39.0 14 37.788608071269735 40.0 37.0 41.0 32.0 41.0 15 37.794400420147575 40.0 37.0 41.0 32.0 41.0 16 37.68218571679481 39.0 37.0 41.0 32.0 41.0 17 37.69921213698296 39.0 37.0 41.0 32.0 41.0 18 37.65166589636734 39.0 37.0 41.0 32.0 41.0 19 37.69245205911584 40.0 37.0 41.0 32.0 41.0 20 37.56975761679313 39.0 37.0 41.0 32.0 41.0 21 37.50871236591505 39.0 36.0 41.0 32.0 41.0 22 37.3687047449144 39.0 36.0 41.0 31.0 41.0 23 37.19449518638439 39.0 36.0 41.0 31.0 41.0 24 37.040511918925674 39.0 36.0 41.0 31.0 41.0 25 37.24357468947443 39.0 36.0 41.0 31.0 41.0 26 37.13015404691964 39.0 36.0 41.0 31.0 41.0 27 37.026190177194735 39.0 36.0 41.0 31.0 41.0 28 36.861608712970074 39.0 36.0 41.0 30.0 41.0 29 36.75557409740122 39.0 35.0 41.0 30.0 41.0 30 36.57830535010644 39.0 35.0 40.0 30.0 41.0 31 36.43599179383079 39.0 35.0 40.0 30.0 41.0 32 36.28509166562018 38.0 35.0 40.0 30.0 41.0 33 36.156804893321095 38.0 35.0 40.0 30.0 41.0 34 35.9758400038666 38.0 35.0 40.0 29.0 41.0 35 35.82886904954557 38.0 35.0 40.0 28.0 41.0 36 35.654017790677955 38.0 35.0 40.0 27.0 41.0 37 35.60137160750034 38.0 34.0 40.0 27.0 41.0 38 35.426384844997216 38.0 34.0 40.0 26.0 41.0 39 35.353765684869465 38.0 34.0 40.0 25.0 41.0 40 35.191260576511866 38.0 34.0 40.0 25.0 41.0 41 35.07488582524088 38.0 34.0 40.0 24.0 41.0 42 34.81541340907727 38.0 33.0 40.0 23.0 41.0 43 34.48262683722863 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 5.0 14 10.0 15 25.0 16 40.0 17 115.0 18 297.0 19 780.0 20 1669.0 21 3296.0 22 6433.0 23 10927.0 24 17775.0 25 27385.0 26 39997.0 27 56437.0 28 75303.0 29 98995.0 30 125398.0 31 154975.0 32 190794.0 33 234014.0 34 288603.0 35 354121.0 36 455697.0 37 628778.0 38 863234.0 39 999458.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.584576924421334 21.090795635056775 13.286649310118195 24.037978130403694 2 18.92703129227746 22.85970065779679 34.90757055359276 23.305697496332986 3 19.55550492150067 24.11541802655785 32.792893913168065 23.536183138773417 4 13.522162396360219 16.001123730786208 36.516244685042516 33.96046918781106 5 12.866027037722228 38.0350721384243 35.388953691848336 13.709947132005137 6 32.88025923485326 36.94513095304367 13.738428787876828 16.436181024226237 7 26.687958862131957 32.57399512618452 21.353474179437022 19.3845718322465 8 27.104869888459792 33.83124446279929 19.159890406040528 19.90399524270039 9 24.602540650011804 14.097276074848065 21.535282082751294 39.76490119238884 10 15.988414870704071 27.394562851894094 34.3750498968403 22.241972380561528 11 33.552512621473184 21.977092980954836 23.63181245606381 20.83858194150817 12 21.38068279159929 26.468391187775676 30.923634207504396 21.227291813120637 13 31.688992401007905 20.398605089326672 26.247960432938434 21.664442076726992 14 20.90279512929161 22.363645151364896 27.387895555178677 29.345664164164813 15 23.040062901305454 29.18707312578837 24.910228841474126 22.862635131432054 16 22.514856851629126 27.90464341614159 26.29381158348944 23.286688148739838 17 22.036710265177163 26.375437419976254 26.845147394726837 24.742704920119742 18 23.349261483609453 25.317948060679736 29.12842680710712 22.204363648603685 19 22.869129812051277 24.381052621585383 30.290499943683997 22.45931762267934 20 24.026024465742392 24.145237457175025 29.941966468460237 21.886771608622347 21 23.065761122626043 24.84077243976885 30.471789998709696 21.621676438895413 22 21.89305051912133 25.401710021356926 30.019794750830826 22.68544470869092 23 22.966442136279543 25.44072125909633 30.646628527140212 20.946208077483913 24 22.726441031536528 25.33139053917069 28.525716130240568 23.41645229905221 25 22.860434276205606 25.51024239183767 29.586118386160333 22.043204945796386 26 22.515353122905683 26.168859106858427 29.50067341854527 21.815114351690625 27 21.27745836607645 26.419864487733687 29.457519394497254 22.845157751692607 28 22.232046955030484 25.827208698470322 29.29737481125509 22.643369535244105 29 22.174997335239016 26.08054439664417 28.761703910747123 22.982754357369693 30 22.341766061172557 26.297544406569596 30.1309595167785 21.229730015479348 31 23.16609422853767 25.915652870756716 29.74291853253878 21.17533436816683 32 22.63588231207178 25.801942017390207 28.901652410734822 22.660523259803192 33 22.381036223056245 25.807552040516452 29.41076200944124 22.400649726986067 34 21.705028436344147 26.57409696968128 29.8542990686067 21.866575525367875 35 21.26576362555944 28.650927531015874 28.89643077382501 21.186878069599675 36 23.31929101390811 26.44795775738894 28.686788524999773 21.545962703703175 37 22.355122231615415 27.211848714074815 28.689205150346464 21.743823903963307 38 22.31168770641109 26.029406878147277 29.551638320945973 22.10726709449566 39 21.958709366710384 25.788672154995446 30.33156099756568 21.921057480728493 40 20.855304125826777 26.571572459274467 29.830844856536604 22.742278558362152 41 22.57067658173523 25.397222002855933 29.766027512416493 22.266073902992343 42 20.994130621189232 27.31723084080006 29.342557074433355 22.346081463577356 43 21.482979405605104 27.121786265886616 28.53061411197002 22.864620216538263 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 874.0 1 908.0 2 942.0 3 1730.0 4 2518.0 5 2518.0 6 4164.0 7 5810.0 8 6067.0 9 6324.0 10 10080.0 11 13836.0 12 13836.0 13 26944.0 14 40052.0 15 65489.5 16 90927.0 17 85823.0 18 80719.0 19 80719.0 20 89870.5 21 99022.0 22 81835.5 23 64649.0 24 73622.5 25 82596.0 26 82596.0 27 92963.5 28 103331.0 29 111610.0 30 119889.0 31 132260.0 32 144631.0 33 144631.0 34 160134.5 35 175638.0 36 191477.5 37 207317.0 38 216602.0 39 225887.0 40 225887.0 41 231834.0 42 237781.0 43 250751.0 44 263721.0 45 278927.5 46 294134.0 47 294134.0 48 374467.0 49 454800.0 50 434749.5 51 414699.0 52 387097.0 53 359495.0 54 359495.0 55 327427.5 56 295360.0 57 256498.5 58 217637.0 59 197407.5 60 177178.0 61 177178.0 62 156934.0 63 136690.0 64 119988.0 65 103286.0 66 88226.0 67 73166.0 68 73166.0 69 62356.0 70 51546.0 71 44204.0 72 36862.0 73 29925.5 74 22989.0 75 22989.0 76 18409.0 77 13829.0 78 10783.5 79 7738.0 80 6023.5 81 4309.0 82 4309.0 83 3260.0 84 2211.0 85 1653.5 86 1096.0 87 836.5 88 577.0 89 577.0 90 435.0 91 293.0 92 213.0 93 133.0 94 92.5 95 52.0 96 52.0 97 32.5 98 13.0 99 9.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4634562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.3830914478334 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29206856514392 30.330523758322265 2 13.897153098126344 11.502143150486074 3 5.130897775280068 6.369972355316998 4 2.4295044415887213 4.021616179167339 5 1.3506149909989706 2.794631184166254 6 0.7904149851261364 1.962588936672767 7 0.5307829843354596 1.537580854579577 8 0.36684799775350474 1.2145043390790293 9 0.2937905833739981 1.0942166320450637 >10 1.60783691071636 12.848113723663 >50 0.1792783212924041 5.1765500885794 >100 0.11658919368811305 9.103337773428786 >500 0.008469355710299335 2.356015752141707 >1k 0.004809757378575879 3.964561382271677 >5k 5.227997150625928E-4 1.446780295204128 >10k+ 4.1823977205007425E-4 4.276863594875919 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47717 1.029590282749481 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 46246 0.9978504980621685 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 35274 0.7611075221347778 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16749 0.3613933743900718 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 15226 0.3285315850775111 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15221 0.3284237000173911 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10663 0.23007567921197297 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10586 0.22841424928612455 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9821 0.21190783508776018 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8786 0.18957562764291425 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 8528 0.18400875854072077 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6527 0.14083315748068534 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 6156 0.13282808601977922 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6045 0.13043303768511458 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 5440 0.11737894541059113 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 5265 0.11360296830639012 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5215 0.11252411770518983 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5089 0.1098054141901651 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4985 0.10756140493966852 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4798 0.10352650369117944 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.157701202400572E-5 0.0 0.0 0.0 0.0 3 2.157701202400572E-5 0.0 0.0 0.0 0.0 4 4.315402404801144E-5 0.0 0.0 0.0 0.0 5 4.315402404801144E-5 0.0 0.0 0.0 0.0 6 6.473103607201716E-5 0.0 0.0 0.0 0.0 7 6.473103607201716E-5 0.0 0.0 0.0 0.0 8 8.630804809602288E-5 0.0 0.0 2.157701202400572E-5 0.0 9 8.630804809602288E-5 0.0 0.0 2.157701202400572E-5 0.0 10 1.7261609619204576E-4 0.0 0.0 2.157701202400572E-5 0.0 11 1.7261609619204576E-4 0.0 0.0 4.315402404801144E-5 0.0 12 1.7261609619204576E-4 0.0 0.0 4.315402404801144E-5 0.0 13 1.941931082160515E-4 0.0 0.0 4.315402404801144E-5 0.0 14 2.3734713226406293E-4 0.0 0.0 6.473103607201716E-5 0.0 15 2.3734713226406293E-4 0.0 0.0 1.2946207214403432E-4 0.0 16 2.3734713226406293E-4 0.0 0.0 4.099632284561087E-4 0.0 17 2.3734713226406293E-4 0.0 0.0 5.610023126241487E-4 0.0 18 2.3734713226406293E-4 0.0 0.0 6.688873727441774E-4 0.0 19 2.5892414428806864E-4 0.0 0.0 9.062345050082403E-4 0.0 20 2.5892414428806864E-4 0.0 0.0 0.0014456598056083834 0.0 21 2.5892414428806864E-4 0.0 0.0 0.002610818454904692 0.0 22 2.8050115631207434E-4 0.0 0.0 0.004466441488969184 0.0 23 2.8050115631207434E-4 0.0 0.0 0.005610023126241487 0.0 24 3.020781683360801E-4 0.0 0.0 0.007185145003993905 0.0 25 3.020781683360801E-4 0.0 0.0 0.008285572617218196 0.0 26 3.236551803600858E-4 0.0 0.0 0.011435816372723033 0.0 27 3.452321923840915E-4 0.0 0.0 0.028416924835615535 0.0 28 3.452321923840915E-4 0.0 0.0 0.06956428676539445 0.0 29 3.452321923840915E-4 0.0 0.0 0.13067038481737864 0.0 30 3.452321923840915E-4 0.0 0.0 0.21887720997151403 0.0 31 3.452321923840915E-4 0.0 0.0 0.32253317573483753 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11965 0.0 26.90347 1 GTATTGG 1785 0.0 20.831932 1 ATTGGAC 1785 0.0 19.38095 3 TTGGACC 2375 0.0 19.162106 4 GGACCCT 2560 0.0 17.126953 6 GTATCAA 19010 0.0 16.942926 2 ATCGTAC 100 5.885531E-6 16.650002 25 TGGACCC 2745 0.0 16.309654 5 GACCCTC 2710 0.0 15.564576 7 TATTGGA 2360 0.0 15.207627 2 TAACGTG 100 1.0945006E-4 14.8 5 TTAACGG 540 0.0 14.388888 35 ATACGAC 245 0.0 14.346938 19 GTATTAG 1110 0.0 13.5 1 GTCGTCA 320 0.0 13.296875 24 ACCCTCG 3260 0.0 13.222392 8 CCCTCGC 3075 0.0 13.0552845 9 TAGGACC 685 0.0 12.963504 4 TCTAGAC 460 0.0 12.869565 3 CTAATAC 1140 0.0 12.820176 3 >>END_MODULE