##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088691_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3179748 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59518490144502 31.0 31.0 34.0 30.0 34.0 2 31.799328122857535 31.0 31.0 34.0 30.0 34.0 3 31.86859398920921 31.0 31.0 34.0 30.0 34.0 4 35.587701918516814 37.0 35.0 37.0 33.0 37.0 5 35.46028018572541 37.0 35.0 37.0 33.0 37.0 6 35.509284383542344 37.0 35.0 37.0 33.0 37.0 7 35.376642111261646 37.0 35.0 37.0 33.0 37.0 8 35.408371355214314 37.0 35.0 37.0 33.0 37.0 9 37.00368079483028 39.0 37.0 39.0 33.0 39.0 10 36.82240447985186 39.0 37.0 39.0 32.0 39.0 11 36.91427056483721 39.0 37.0 39.0 33.0 39.0 12 36.768991442089124 39.0 37.0 39.0 32.0 39.0 13 36.81370127444062 39.0 37.0 39.0 32.0 39.0 14 37.81334401342497 40.0 37.0 41.0 32.0 41.0 15 37.81894540070471 40.0 37.0 41.0 32.0 41.0 16 37.71020816743968 39.0 37.0 41.0 32.0 41.0 17 37.73536173306815 39.0 37.0 41.0 32.0 41.0 18 37.689064353527385 39.0 37.0 41.0 32.0 41.0 19 37.741662232353 40.0 37.0 41.0 32.0 41.0 20 37.619618598706566 39.0 37.0 41.0 32.0 41.0 21 37.56032396277944 39.0 36.0 41.0 32.0 41.0 22 37.431685781388964 39.0 36.0 41.0 32.0 41.0 23 37.26699694441195 39.0 36.0 41.0 31.0 41.0 24 37.10650812580116 39.0 36.0 41.0 31.0 41.0 25 37.291085016800075 39.0 36.0 41.0 31.0 41.0 26 37.179220177196434 39.0 36.0 41.0 31.0 41.0 27 37.075188977239705 39.0 36.0 41.0 31.0 41.0 28 36.901555091787145 39.0 35.0 41.0 30.0 41.0 29 36.7946853021057 39.0 35.0 41.0 30.0 41.0 30 36.600330906725944 39.0 35.0 40.0 30.0 41.0 31 36.447273809119466 39.0 35.0 40.0 30.0 41.0 32 36.28122354350093 38.0 35.0 40.0 30.0 41.0 33 36.14843440423581 38.0 35.0 40.0 30.0 41.0 34 35.977490354581555 38.0 35.0 40.0 29.0 41.0 35 35.85020919896797 38.0 35.0 40.0 28.0 41.0 36 35.657730109430055 38.0 35.0 40.0 27.0 41.0 37 35.60356827018997 38.0 35.0 40.0 27.0 41.0 38 35.41796016539676 38.0 34.0 40.0 26.0 41.0 39 35.327388837102816 38.0 34.0 40.0 25.0 41.0 40 35.16433409188401 38.0 34.0 40.0 24.0 41.0 41 35.03955376337999 38.0 34.0 40.0 24.0 41.0 42 34.791526246734016 38.0 34.0 40.0 23.0 41.0 43 34.44349457881568 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 4.0 13 5.0 14 3.0 15 13.0 16 39.0 17 77.0 18 220.0 19 477.0 20 1037.0 21 2201.0 22 4196.0 23 7479.0 24 12064.0 25 18500.0 26 27123.0 27 37852.0 28 51566.0 29 67458.0 30 85384.0 31 105958.0 32 130737.0 33 160499.0 34 197285.0 35 242952.0 36 312659.0 37 430285.0 38 587882.0 39 695790.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.80474301737119 21.58718238049053 14.182318850424625 23.42575575171366 2 18.97817059716682 23.26426496690933 34.99082317215075 22.766741263773106 3 19.63004615460093 24.364635184926602 32.75423083841864 23.251087822053822 4 13.933242508525833 16.627575518563106 36.03879930107669 33.40038267183437 5 12.64609648311753 38.58019566330413 35.05101662144296 13.722691232135375 6 32.34190256586371 37.263047260348934 13.860312200841074 16.534737972946285 7 25.893592825594986 33.19354238134594 21.65067797825488 19.262186814804192 8 26.63987838029932 34.82823167118904 19.13519561927549 19.39669432923615 9 24.427376005897322 14.648833806955771 22.060427430098233 38.86336275704867 10 16.339376579527688 27.932527986494527 33.84494620328403 21.883149230693753 11 33.000350971209045 22.6688718728654 23.514976658527655 20.81580049739791 12 20.72267991048347 27.342386880972956 31.103282398479376 20.831650810064197 13 31.025446041636002 21.341848473526834 26.293341484922706 21.33936399991446 14 20.26581980710421 23.3352139855108 27.959322562668486 28.4396436447165 15 22.69915729170991 29.8167968027655 25.46346440032355 22.020581505201044 16 21.716406457367064 28.556917089027177 26.8155841280504 22.91109232555536 17 21.399117162743714 27.35436896257188 27.325184259884743 23.921329614799664 18 22.666230154087682 26.086375398302003 29.54152341632104 21.705871031289274 19 22.477315812448033 25.3946539159707 30.801591824257773 21.326438447323497 20 23.380091755698878 24.98993630941823 30.457759545725004 21.17221238915788 21 22.266607290892235 25.753172892946235 31.06714745948421 20.91307235667732 22 21.158217569442613 26.103766713588623 30.56028339352678 22.177732323441983 23 22.031179829344964 26.225788961892576 31.196591679592217 20.546439529170236 24 21.890445406365536 26.437315158308145 29.22335354877179 22.44888588655453 25 21.923498340120034 26.539839006109915 30.24783724999591 21.288825403774137 26 21.539002461830307 27.253291770291234 30.111788732943616 21.095917034934843 27 20.667046570986127 27.221528246892525 29.855321868273837 22.25610331384751 28 21.123340591770166 26.724979463781406 30.10345473918059 22.048225205267837 29 21.373140261429523 26.639846931266252 29.541083129858087 22.445929677446134 30 21.550544256966276 26.911252086643344 30.75919852768207 20.779005128708313 31 22.149019356250875 26.676673748988915 30.533551715418955 20.640755179341255 32 21.737288615324232 26.499175406352954 29.799216793280475 21.964319185042335 33 21.28763034051755 26.387059603465428 30.411560916148073 21.913749139868948 34 20.70261542738607 26.682711963337972 30.993305129840476 21.621367479435477 35 20.403692368074452 28.32152107651298 30.028763285644022 21.246023269768546 36 22.220503008414504 26.36737250876485 29.89815545131249 21.513969031508157 37 21.34508772393284 26.771586930788228 30.092950762135867 21.790374583143066 38 21.086922611477387 25.706785569170894 31.25820033537249 21.948091483979233 39 20.68770858571182 25.5231232160536 31.827144792606205 21.96202340562837 40 19.77672444483022 25.86242683382457 31.67927143912033 22.68157728222488 41 20.80727780943647 25.094284201137953 31.679680276550215 22.418757712875358 42 19.71813489622448 26.828887069038178 31.060448815440722 22.392529219296623 43 20.03608462054226 26.636198843430357 30.463011534247368 22.864705001780013 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1170.0 1 1053.5 2 937.0 3 1645.5 4 2354.0 5 2354.0 6 3643.5 7 4933.0 8 5381.0 9 5829.0 10 9162.0 11 12495.0 12 12495.0 13 23434.5 14 34374.0 15 53508.0 16 72642.0 17 67545.5 18 62449.0 19 62449.0 20 68742.5 21 75036.0 22 61337.5 23 47639.0 24 53507.5 25 59376.0 26 59376.0 27 65670.5 28 71965.0 29 78423.0 30 84881.0 31 93469.5 32 102058.0 33 102058.0 34 113930.5 35 125803.0 36 136590.0 37 147377.0 38 156756.0 39 166135.0 40 166135.0 41 171793.5 42 177452.0 43 187995.5 44 198539.0 45 208941.0 46 219343.0 47 219343.0 48 272243.5 49 325144.0 50 301905.5 51 278667.0 52 252239.5 53 225812.0 54 225812.0 55 203560.5 56 181309.0 57 157058.5 58 132808.0 59 119797.0 60 106786.0 61 106786.0 62 94159.5 63 81533.0 64 70748.0 65 59963.0 66 50265.5 67 40568.0 68 40568.0 69 34550.5 70 28533.0 71 23712.0 72 18891.0 73 15353.5 74 11816.0 75 11816.0 76 9372.0 77 6928.0 78 5360.0 79 3792.0 80 2960.0 81 2128.0 82 2128.0 83 1620.0 84 1112.0 85 846.5 86 581.0 87 438.5 88 296.0 89 296.0 90 250.5 91 205.0 92 130.0 93 55.0 94 38.0 95 21.0 96 21.0 97 15.0 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3179748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.290782192365505 #Duplication Level Percentage of deduplicated Percentage of total 1 77.69766771655988 37.520811485551825 2 12.382162577977827 11.958886322471724 3 4.136133899461203 5.992114237720212 4 1.8421859593327254 3.5584240367988214 5 0.9836260259030749 2.375003508781373 6 0.5878282484818508 1.7032011548374062 7 0.3963243404579989 1.3397168681813094 8 0.28316236726673144 1.0939305762201867 9 0.20773981058604918 0.9028726151124749 >10 1.261630407632875 11.630787493100698 >50 0.1287629224773499 4.348439933624757 >100 0.08253300697053582 7.497103901297695 >500 0.0056759004434590405 1.8094593058531314 >1k 0.0039144140986902285 3.6051509178839827 >5k 3.9144140986902286E-4 1.309758187110056 >10k+ 2.6096093991268194E-4 3.3543394554544457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35023 1.1014394851415898 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33162 1.0429128346019874 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24956 0.784842069245739 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13329 0.41918416176376244 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8146 0.2561838233721666 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7748 0.24366710821109092 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7228 0.2273136110157157 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6655 0.20929331506773494 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6157 0.19363169659985635 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5639 0.17734109747061716 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4366 0.13730647837501586 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3915 0.12312296446133468 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3902 0.12271412703145029 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3762 0.11831126240192619 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3626 0.1140341939046742 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3492 0.10982002347355829 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3216 0.1011400903467822 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.144903306802929E-5 0.0 0.0 0.0 0.0 3 3.144903306802929E-5 0.0 0.0 0.0 0.0 4 3.144903306802929E-5 0.0 0.0 0.0 0.0 5 3.144903306802929E-5 0.0 0.0 0.0 0.0 6 3.144903306802929E-5 0.0 0.0 3.144903306802929E-5 0.0 7 3.144903306802929E-5 0.0 3.144903306802929E-5 3.144903306802929E-5 0.0 8 3.144903306802929E-5 0.0 3.144903306802929E-5 3.144903306802929E-5 0.0 9 3.144903306802929E-5 0.0 3.144903306802929E-5 1.5724516534014644E-4 0.0 10 3.144903306802929E-5 0.0 3.144903306802929E-5 2.515922645442343E-4 0.0 11 6.289806613605858E-5 0.0 3.144903306802929E-5 3.459393637483222E-4 0.0 12 6.289806613605858E-5 0.0 3.144903306802929E-5 5.34633562156498E-4 0.0 13 6.289806613605858E-5 0.0 3.144903306802929E-5 5.660825952245272E-4 0.0 14 6.289806613605858E-5 0.0 3.144903306802929E-5 6.918787274966444E-4 0.0 15 6.289806613605858E-5 0.0 3.144903306802929E-5 9.120219589728494E-4 0.0 16 6.289806613605858E-5 0.0 3.144903306802929E-5 0.0011636142235170838 0.0 17 6.289806613605858E-5 0.0 3.144903306802929E-5 0.0017925948848776696 0.0 18 6.289806613605858E-5 0.0 3.144903306802929E-5 0.0022014323147620503 0.0 19 6.289806613605858E-5 0.0 3.144903306802929E-5 0.0030820052406668706 0.0 20 6.289806613605858E-5 0.0 3.144903306802929E-5 0.005189090456224833 0.0 21 6.289806613605858E-5 0.0 3.144903306802929E-5 0.008491238928367909 0.0 22 6.289806613605858E-5 0.0 3.144903306802929E-5 0.013931921649136975 0.0 23 6.289806613605858E-5 0.0 3.144903306802929E-5 0.01776870368343655 0.0 24 6.289806613605858E-5 0.0 3.144903306802929E-5 0.02393271416477029 0.0 25 6.289806613605858E-5 0.0 3.144903306802929E-5 0.02890166138951892 0.0 26 9.434709920408787E-5 0.0 6.289806613605858E-5 0.039216944235832524 0.0 27 9.434709920408787E-5 0.0 6.289806613605858E-5 0.09878141286668 0.0 28 9.434709920408787E-5 0.0 6.289806613605858E-5 0.21608630621042926 0.0 29 9.434709920408787E-5 0.0 6.289806613605858E-5 0.36584660168038474 0.0 30 9.434709920408787E-5 0.0 9.434709920408787E-5 0.5930344165638284 0.0 31 9.434709920408787E-5 0.0 9.434709920408787E-5 0.8920203739415828 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9450 0.0 25.175661 1 GTATTGG 880 0.0 19.340908 1 TACGTTA 85 2.7255657E-5 17.411764 19 CTCTAAT 615 0.0 16.544716 1 ATTGGAC 1035 0.0 16.086956 3 GTATCAA 14860 0.0 15.960296 2 GTATTAG 665 0.0 15.857142 1 CTAATAC 760 0.0 15.335526 3 TTGGACC 1435 0.0 15.2125435 4 GGACCCT 1365 0.0 15.179487 6 ATACTGG 650 0.0 14.8 6 TATACCG 225 1.8189894E-12 14.8 5 TTATGCG 340 0.0 14.691176 4 TCTAATA 795 0.0 14.660377 2 TACTGGT 620 0.0 14.620968 7 TAATACT 825 0.0 14.575756 4 TGGACCC 1490 0.0 14.526845 5 GTACTAG 430 0.0 14.197674 1 TATGCGG 370 0.0 14.0 5 TAGACTG 400 0.0 13.874999 5 >>END_MODULE