##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088689_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2122942 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.342994297536155 31.0 31.0 34.0 30.0 34.0 2 31.560100558564482 31.0 31.0 34.0 30.0 34.0 3 31.618360746548895 31.0 31.0 34.0 30.0 34.0 4 35.379849284624825 37.0 35.0 37.0 33.0 37.0 5 35.2412185542516 37.0 35.0 37.0 33.0 37.0 6 35.30267430763535 37.0 35.0 37.0 32.0 37.0 7 35.16282734054911 37.0 35.0 37.0 32.0 37.0 8 35.195505105650554 37.0 35.0 37.0 32.0 37.0 9 36.751075629951266 39.0 37.0 39.0 32.0 39.0 10 36.532121932676446 38.0 35.0 39.0 32.0 39.0 11 36.646456191455066 39.0 35.0 39.0 32.0 39.0 12 36.485684488789616 38.0 35.0 39.0 32.0 39.0 13 36.53730295033967 38.0 35.0 39.0 32.0 39.0 14 37.45428278304353 39.0 36.0 41.0 32.0 41.0 15 37.47119987262958 39.0 36.0 41.0 32.0 41.0 16 37.338897153101684 39.0 36.0 41.0 32.0 41.0 17 37.373932495565114 39.0 36.0 41.0 32.0 41.0 18 37.33995794515347 39.0 36.0 40.0 32.0 41.0 19 37.39374085585004 39.0 36.0 41.0 32.0 41.0 20 37.26418055698177 39.0 36.0 40.0 31.0 41.0 21 37.20564386591815 39.0 36.0 40.0 31.0 41.0 22 37.07019221438928 39.0 36.0 40.0 31.0 41.0 23 36.89151799719446 39.0 36.0 40.0 31.0 41.0 24 36.718424243337786 39.0 35.0 40.0 30.0 41.0 25 36.91680601730994 39.0 36.0 40.0 31.0 41.0 26 36.78008348791441 39.0 36.0 40.0 30.0 41.0 27 36.65102390927307 39.0 35.0 40.0 30.0 41.0 28 36.47684769532093 39.0 35.0 40.0 30.0 41.0 29 36.372630057721786 39.0 35.0 40.0 30.0 41.0 30 36.1639456000211 38.0 35.0 40.0 29.0 41.0 31 36.003797089133855 38.0 35.0 40.0 29.0 41.0 32 35.83401383551694 38.0 35.0 40.0 29.0 41.0 33 35.700459550943926 38.0 34.0 40.0 28.0 41.0 34 35.51461415337772 38.0 34.0 40.0 27.0 41.0 35 35.37845499311804 38.0 34.0 40.0 27.0 41.0 36 35.180686518991095 38.0 34.0 40.0 25.0 41.0 37 35.12267551350908 38.0 34.0 40.0 25.0 41.0 38 34.928320227307196 38.0 33.0 40.0 24.0 41.0 39 34.84425245720326 38.0 33.0 40.0 24.0 41.0 40 34.67242204450239 38.0 33.0 40.0 24.0 41.0 41 34.53382334515027 38.0 33.0 40.0 23.0 41.0 42 34.260901616718684 38.0 33.0 40.0 22.0 41.0 43 33.902360026793005 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 7.0 15 10.0 16 40.0 17 71.0 18 169.0 19 441.0 20 966.0 21 1951.0 22 3584.0 23 6175.0 24 10002.0 25 15157.0 26 21938.0 27 29910.0 28 39874.0 29 51966.0 30 64900.0 31 79467.0 32 97405.0 33 117035.0 34 142846.0 35 173057.0 36 221626.0 37 295820.0 38 397683.0 39 350840.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.84503580408697 22.537780118345204 14.594086885086826 23.023097192481 2 19.342968390092615 24.042154707947745 34.301031304670595 22.313845597289045 3 20.051937358627793 24.89620536029717 32.72373903761855 22.328118243456487 4 14.348719842558111 17.193592665273002 35.844267059580524 32.613420432588356 5 12.418521090072174 39.04115138331617 35.02728760371221 13.513039922899447 6 32.25325986296376 37.71412502084372 13.656049011230643 16.37656610496189 7 25.634708814465963 33.406188204859106 21.77756151604707 19.18154146462786 8 26.730782093905532 35.05503212051954 19.109000622720735 19.10518516285419 9 24.441694591750505 14.50308110160334 21.893438445327288 39.16178586131886 10 16.10529161889491 28.328235062474622 33.948077714793904 21.618395603836564 11 32.98554553068336 22.66670497828014 23.554058471686933 20.793691019349563 12 20.514361673564327 27.58864820612151 31.35624995878361 20.540740161530554 13 31.28361490799089 21.291396561940928 26.392572194624254 21.032416335443926 14 20.15632080386558 23.24981087566217 28.112590923350712 28.48127739712154 15 22.4485171992452 30.066907150548627 25.558729348234664 21.92584630197151 16 21.478872244272335 28.715998835578173 27.00163263998734 22.803496280162154 17 21.35348021754716 27.50998378665079 27.481344285430314 23.65519171037174 18 22.53495385177739 26.129964926031896 29.709949683034203 21.625131539156513 19 22.33801017644382 25.323772387564052 31.153936376971203 21.184281059020922 20 23.20426087947763 25.034032959920715 30.789018258624118 20.972687901977537 21 22.14445802099162 25.797925708756996 31.288419561156168 20.76919670909521 22 20.940232940890517 26.14682831655316 30.928541618188344 21.984397124367977 23 21.91746171115367 26.3204552927023 31.532420574843776 20.22966242130025 24 21.805871286167967 26.337648414323144 29.472825917994932 22.383654381513956 25 21.808273612750607 26.53209555418848 30.481002307175608 21.178628525885305 26 21.43859794568104 27.314735871257906 30.304219333359082 20.94244684970197 27 20.540551743759366 27.182796326983972 30.188059777422087 22.088592151834575 28 21.067556249770366 26.75758452185693 30.345058885263942 21.82980034310876 29 21.221964613258393 26.569873317311544 29.813485248301646 22.394676821128414 30 21.44637017874252 26.849532394196356 31.026801485862542 20.67729594119858 31 22.02650849622835 26.727343469581367 30.78463754544401 20.461510488746278 32 21.64642274730068 26.533744209686372 30.034122458362027 21.78571058465092 33 21.263840462904778 26.535911014055024 30.584679185771446 21.615569337268752 34 20.623832398624174 26.978645671902484 31.07376461533099 21.323757314142355 35 20.26188186017329 28.645860320253686 30.1521661920109 20.94009162756213 36 22.24959513731416 26.598842549631595 29.94613135921754 21.205430953836704 37 21.392388487297346 27.150435574782545 30.057957306417226 21.399218631502887 38 21.146032251469894 25.928546328632624 31.21229878159648 21.713122638300998 39 20.692746198435945 25.757180365737735 31.883066047023423 21.667007388802897 40 19.85466395219464 26.18102614202366 31.445701295654803 22.51860861012689 41 21.01154906728493 25.480912808734296 31.398408435086782 22.109129688893997 42 20.020471590839506 27.150529783668137 30.71836159442886 22.110637031063497 43 20.300743025480678 27.025373279156945 30.124091944103988 22.549791751258393 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 826.0 1 691.0 2 556.0 3 898.5 4 1241.0 5 1241.0 6 2145.0 7 3049.0 8 3432.0 9 3815.0 10 6003.5 11 8192.0 12 8192.0 13 15932.5 14 23673.0 15 37211.0 16 50749.0 17 47041.5 18 43334.0 19 43334.0 20 47666.5 21 51999.0 22 43034.0 23 34069.0 24 37613.5 25 41158.0 26 41158.0 27 45531.0 28 49904.0 29 54482.5 30 59061.0 31 64888.0 32 70715.0 33 70715.0 34 78752.0 35 86789.0 36 94285.5 37 101782.0 38 106939.5 39 112097.0 40 112097.0 41 115498.0 42 118899.0 43 124216.5 44 129534.0 45 136660.5 46 143787.0 47 143787.0 48 180523.0 49 217259.0 50 199871.5 51 182484.0 52 165564.0 53 148644.0 54 148644.0 55 132782.0 56 116920.0 57 101032.5 58 85145.0 59 76829.5 60 68514.0 61 68514.0 62 60369.5 63 52225.0 64 45445.0 65 38665.0 66 33010.0 67 27355.0 68 27355.0 69 23203.0 70 19051.0 71 15887.0 72 12723.0 73 10293.5 74 7864.0 75 7864.0 76 6386.0 77 4908.0 78 3859.5 79 2811.0 80 2171.0 81 1531.0 82 1531.0 83 1169.5 84 808.0 85 609.0 86 410.0 87 309.5 88 209.0 89 209.0 90 167.0 91 125.0 92 82.0 93 39.0 94 30.0 95 21.0 96 21.0 97 11.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2122942.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.47228506581756 #Duplication Level Percentage of deduplicated Percentage of total 1 81.5520810273249 44.423282054310945 2 10.874553235603788 11.847235276264366 3 3.1828613588520307 5.201331937930897 4 1.3196244523603584 2.8753183739518735 5 0.710094892371286 1.9340245700514866 6 0.44564685777907925 1.4565241605376718 7 0.29278663769835706 1.1164130034517006 8 0.22592216170274057 0.9845197115965933 9 0.17581766213276695 0.8619470830171511 >10 1.0608099417077852 10.98507270617105 >50 0.098790259303 3.7121164748421362 >100 0.05269402747230756 5.220783196553304 >500 0.004332023797656418 1.649655674360917 >1k 0.0033789785621720007 3.387141331269912 >5k 3.465619038125129E-4 1.267611768543223 >10k+ 2.599214278593847E-4 3.0770226771466196 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24702 1.1635739459674357 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23371 1.1008779326048475 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17125 0.8066635828958116 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9436 0.4444775222309418 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6136 0.2890328610013839 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5916 0.2786698835860801 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5371 0.2529979622618046 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4943 0.2328372607447589 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4492 0.211593157043386 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4348 0.2048101172806417 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2800 0.13189243983114 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2766 0.13029088877604758 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2763 0.13014957544765707 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2513 0.11837346474844815 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2491 0.11733716700691775 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2424 0.11418116933952978 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2280 0.10739812957678543 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2158 0.10165138755557146 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.710444279683571E-5 0.0 4 0.0 0.0 0.0 4.710444279683571E-5 0.0 5 4.710444279683571E-5 0.0 0.0 4.710444279683571E-5 0.0 6 9.420888559367142E-5 0.0 0.0 4.710444279683571E-5 0.0 7 9.420888559367142E-5 0.0 0.0 9.420888559367142E-5 0.0 8 9.420888559367142E-5 0.0 0.0 1.8841777118734285E-4 0.0 9 9.420888559367142E-5 0.0 0.0 2.8262665678101425E-4 0.0 10 2.3552221398417855E-4 0.0 0.0 3.768355423746857E-4 0.0 11 2.3552221398417855E-4 0.0 4.710444279683571E-5 4.710444279683571E-4 0.0 12 2.3552221398417855E-4 0.0 4.710444279683571E-5 7.536710847493714E-4 0.0 13 2.3552221398417855E-4 0.0 4.710444279683571E-5 8.949844131398786E-4 0.0 14 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.001130506627124057 0.0 15 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0015073421694987428 0.0 16 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0023081176970449497 0.0 17 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0030146843389974856 0.0 18 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0033444154385753357 0.0 19 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0042393998517152144 0.0 20 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.0072540841907127 0.0 21 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.010692708514881707 0.0 22 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.01789968826279757 0.0 23 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.02185646145773177 0.0 24 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.027932934578523576 0.0 25 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.03174839444506727 0.0 26 2.8262665678101425E-4 0.0 9.420888559367142E-5 0.03966194083493567 0.0 27 3.2973109957784997E-4 0.0 9.420888559367142E-5 0.08464668370591377 0.0 28 3.2973109957784997E-4 0.0 9.420888559367142E-5 0.17471037833346365 0.0 29 3.2973109957784997E-4 0.0 9.420888559367142E-5 0.29021047207130485 0.0 30 3.2973109957784997E-4 0.0 9.420888559367142E-5 0.46840657917173434 0.0 31 3.2973109957784997E-4 0.0 9.420888559367142E-5 0.6916816380287356 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6310 0.0 25.946909 1 GTATTGG 505 0.0 19.049505 1 CGAATTA 125 8.589268E-9 17.76 15 TATACCG 95 3.6093006E-6 17.526316 5 ATTGGAC 645 0.0 17.209303 3 TGCGACG 100 5.88251E-6 16.650002 22 GTATCAA 10080 0.0 16.260914 2 CCGAATT 145 5.3520125E-8 15.310345 14 TACCCGC 85 5.366811E-4 15.235293 11 TTGGACC 955 0.0 14.722512 4 GGACCCT 895 0.0 14.675978 6 GTTACGC 90 8.2780863E-4 14.388888 22 TCACGTT 185 4.9039954E-9 14.0 24 ACAGCGT 80 0.0063009374 13.875001 8 TAGCGAA 120 3.3029486E-5 13.874999 10 TATTGGA 795 0.0 13.729559 2 GTATTAG 480 0.0 13.489583 1 GACCCTC 935 0.0 13.454545 7 CCCATAG 220 2.8558134E-10 13.454545 1 GATACTG 680 0.0 13.330882 36 >>END_MODULE