##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088686_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2845539 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59021225855629 31.0 31.0 34.0 30.0 34.0 2 31.79029491424999 31.0 31.0 34.0 30.0 34.0 3 31.86055330817817 31.0 31.0 34.0 30.0 34.0 4 35.57582904328495 37.0 35.0 37.0 33.0 37.0 5 35.45676478164594 37.0 35.0 37.0 33.0 37.0 6 35.50530215892314 37.0 35.0 37.0 33.0 37.0 7 35.36663176993884 37.0 35.0 37.0 33.0 37.0 8 35.402197615284834 37.0 35.0 37.0 33.0 37.0 9 36.99633391072834 39.0 37.0 39.0 33.0 39.0 10 36.820499385177996 39.0 37.0 39.0 32.0 39.0 11 36.91303088799697 39.0 37.0 39.0 33.0 39.0 12 36.767155888568034 39.0 37.0 39.0 32.0 39.0 13 36.813203403643385 39.0 37.0 39.0 32.0 39.0 14 37.790139934824296 40.0 37.0 41.0 32.0 41.0 15 37.81089909503964 40.0 37.0 41.0 32.0 41.0 16 37.69677590080473 39.0 37.0 41.0 32.0 41.0 17 37.7345603065008 39.0 37.0 41.0 32.0 41.0 18 37.69805896176436 39.0 37.0 41.0 32.0 41.0 19 37.74444736129078 40.0 37.0 41.0 32.0 41.0 20 37.63370349167592 39.0 37.0 41.0 32.0 41.0 21 37.57328857555633 39.0 37.0 41.0 32.0 41.0 22 37.445506106224514 39.0 36.0 41.0 32.0 41.0 23 37.264778658805945 39.0 36.0 41.0 31.0 41.0 24 37.11054425892599 39.0 36.0 41.0 31.0 41.0 25 37.290605048815 39.0 36.0 41.0 31.0 41.0 26 37.16334444897786 39.0 36.0 41.0 31.0 41.0 27 37.050117394279255 39.0 36.0 41.0 31.0 41.0 28 36.87427197448357 39.0 35.0 41.0 30.0 41.0 29 36.75640502555052 39.0 35.0 41.0 30.0 41.0 30 36.55369474816546 39.0 35.0 40.0 30.0 41.0 31 36.38439993266653 38.0 35.0 40.0 30.0 41.0 32 36.20990469643888 38.0 35.0 40.0 30.0 41.0 33 36.05921514342274 38.0 35.0 40.0 30.0 41.0 34 35.8682372654179 38.0 35.0 40.0 29.0 41.0 35 35.73029257374438 38.0 35.0 40.0 28.0 41.0 36 35.52422370594815 38.0 34.0 40.0 27.0 41.0 37 35.44495366255743 38.0 34.0 40.0 26.0 41.0 38 35.234302886026164 38.0 34.0 40.0 25.0 41.0 39 35.12765384695132 38.0 34.0 40.0 25.0 41.0 40 34.94960392389632 38.0 34.0 40.0 24.0 41.0 41 34.80564244594785 38.0 34.0 40.0 23.0 41.0 42 34.5269356701841 38.0 33.0 40.0 22.0 41.0 43 34.161720854994435 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 4.0 14 3.0 15 21.0 16 31.0 17 76.0 18 185.0 19 458.0 20 1079.0 21 2177.0 22 4081.0 23 7156.0 24 11220.0 25 17228.0 26 25089.0 27 35148.0 28 47459.0 29 61782.0 30 77567.0 31 95772.0 32 118326.0 33 145555.0 34 178660.0 35 219661.0 36 282264.0 37 389317.0 38 517854.0 39 607361.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.17399199237825 21.500882609586444 14.186486286077962 23.13863911195735 2 18.800761472606773 23.716244971515064 34.858211396856625 22.624782159021542 3 19.944762661836652 24.33556524791964 33.0299813146121 22.68969077563161 4 13.90544989894709 16.52790560944693 35.81451528163909 33.752129209966895 5 12.723389136469402 38.57726075797942 34.72495017639892 13.974399929152263 6 32.407287336423785 37.00708371946405 13.684894144835127 16.900734799277046 7 25.577403788877962 33.41405617705468 21.559360107171262 19.4491799268961 8 27.001141084342894 34.46668627630828 19.161185279836264 19.370987359512558 9 24.480072140989808 14.508428807336676 22.045735447660356 38.96576360401316 10 16.250699779549674 28.19153067309919 33.542291987563694 22.015477559787442 11 32.86712991809285 22.709546416337993 23.488063245662772 20.93526041990639 12 20.741834850971998 27.39372048669865 31.282966074265715 20.581478588063632 13 31.553248786960925 21.184352068272478 26.307283084153827 20.95511606061277 14 20.222355061729957 23.46023020594692 28.235599652649285 28.081815079673834 15 22.574176632265452 29.87458615046218 25.601371128633275 21.949866088639094 16 21.418016059523346 28.61942851600347 27.067912265479404 22.89464315899378 17 21.306929899748344 27.231923371986817 27.478871314011162 23.982275414253678 18 22.78875812280204 25.815987761896782 29.75534687804314 21.639907237258036 19 22.3370335110501 25.324270726916765 31.181895591661192 21.15680017037194 20 23.39289674117979 24.93028561548445 30.67074462869776 21.006073014637998 21 22.203034293327203 25.71207071841222 31.405789904829984 20.679105083430592 22 20.939969545312856 26.099167855369405 30.900999775437977 22.059862823879765 23 21.893954010118996 26.19595092529043 31.509742091041453 20.400352973549126 24 21.74466770618853 26.163654759256506 29.82984945910072 22.261828075454247 25 21.655194323465608 26.537819372709354 30.600142890327632 21.20684341349741 26 21.349382313860396 27.181458416138383 30.478478769751533 20.990680500249688 27 20.416975483379424 27.256698994461154 30.43644806836244 21.889877453796977 28 21.023292950825837 26.861167603044628 30.19533381900582 21.920205627123718 29 20.922538752763536 26.781428755676867 29.94093561887572 22.355096872683873 30 21.25122867758973 27.128674040313626 31.203894938709325 20.416202343387315 31 21.889912596523892 26.88404551826561 30.85362737955797 20.372414505652532 32 21.543299880971585 26.778828193885236 29.99719912466496 21.680672800478224 33 21.147627918647398 26.665528042314655 30.548693938125602 21.63815010091234 34 20.323003831611516 27.136756867503838 31.190892129751163 21.349347171133484 35 20.01757839200236 28.755852581883435 30.25922329653538 20.967345729578827 36 21.872446661247658 26.805782665428236 30.194349822652228 21.12742085067188 37 21.1866714882488 27.433361482657592 30.079187106555207 21.3007799225384 38 20.87667749414083 26.24255018117833 31.241778798322567 21.638993526358274 39 20.48578494267694 25.88212637394884 32.020998482185625 21.6110902011886 40 19.496622608229934 26.23197222037723 31.73753724689769 22.533867924495148 41 20.722892921165375 25.565736403542527 31.667814076700406 22.04355659859169 42 19.60640848710912 27.195093794181 31.0741128482161 22.12438487049378 43 19.79125923067651 27.206269181339632 30.385631685244867 22.616839902738988 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1202.0 1 1027.0 2 852.0 3 1566.0 4 2280.0 5 2280.0 6 3670.0 7 5060.0 8 5581.0 9 6102.0 10 9624.0 11 13146.0 12 13146.0 13 24677.5 14 36209.0 15 55752.5 16 75296.0 17 69882.5 18 64469.0 19 64469.0 20 69366.5 21 74264.0 22 61012.5 23 47761.0 24 53664.0 25 59567.0 26 59567.0 27 66075.0 28 72583.0 29 77043.0 30 81503.0 31 87244.0 32 92985.0 33 92985.0 34 100643.0 35 108301.0 36 116471.5 37 124642.0 38 130977.5 39 137313.0 40 137313.0 41 140372.0 42 143431.0 43 149794.0 44 156157.0 45 168912.5 46 181668.0 47 181668.0 48 233344.0 49 285020.0 50 264703.5 51 244387.0 52 223184.0 53 201981.0 54 201981.0 55 180764.5 56 159548.0 57 140039.0 58 120530.0 59 109132.5 60 97735.0 61 97735.0 62 86811.0 63 75887.0 64 66282.0 65 56677.0 66 48828.0 67 40979.0 68 40979.0 69 34820.5 70 28662.0 71 24232.5 72 19803.0 73 16187.0 74 12571.0 75 12571.0 76 10180.0 77 7789.0 78 6025.0 79 4261.0 80 3347.5 81 2434.0 82 2434.0 83 1834.5 84 1235.0 85 943.0 86 651.0 87 490.5 88 330.0 89 330.0 90 240.0 91 150.0 92 108.5 93 67.0 94 49.5 95 32.0 96 32.0 97 22.5 98 13.0 99 9.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2845539.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.19419118190327 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82158322834071 41.140287842803154 2 12.301684974841127 12.841529948728095 3 3.975618664015914 6.225126018479683 4 1.6476840216539081 3.439981393342853 5 0.8593950327248013 2.242771431940815 6 0.49817958883056745 1.560124842140676 7 0.3214183288492897 1.1743318793729378 8 0.2263783458203271 0.9452507728951333 9 0.17113220584018216 0.8038896362102961 >10 1.0124390181678193 10.04491496775617 >50 0.0994516788714796 3.6212371528870015 >100 0.05653203249500911 5.54965373578972 >500 0.003914023919337686 1.3926895561359807 >1k 0.00391402391931511 3.8133065782710056 >5k 4.0489902613604587E-4 1.4121322631349402 >10k+ 2.6993268409069725E-4 3.7927719801115805 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35986 1.264646170725476 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32415 1.1391514929157533 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25411 0.8930118336104338 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13869 0.4873944795696 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7798 0.27404298447499753 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7346 0.2581584719098912 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6848 0.24065739390674315 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6572 0.2309580012784924 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6018 0.211488930568163 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5510 0.1936364252958754 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4051 0.14236318672841947 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3832 0.13466692953426398 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3790 0.133190935003878 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3607 0.1267598159786248 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3581 0.12584610507886201 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3498 0.12292925874500403 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3291 0.11565471427381596 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3032 0.1065527480031024 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2924 0.10275733349639558 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.514272691395198E-5 0.0 0.0 0.0 0.0 7 3.514272691395198E-5 0.0 0.0 0.0 0.0 8 7.028545382790396E-5 0.0 0.0 0.0 0.0 9 7.028545382790396E-5 0.0 0.0 7.028545382790396E-5 0.0 10 7.028545382790396E-5 0.0 0.0 1.4057090765580793E-4 0.0 11 1.757136345697599E-4 0.0 0.0 2.8114181531161585E-4 0.0 12 1.757136345697599E-4 0.0 0.0 3.514272691395198E-4 0.0 13 1.757136345697599E-4 0.0 0.0 4.2171272296742375E-4 0.0 14 1.757136345697599E-4 0.0 0.0 6.677118113650876E-4 0.0 15 1.757136345697599E-4 0.0 0.0 9.137108997627515E-4 0.0 16 1.757136345697599E-4 0.0 0.0 0.0015111372572999351 0.0 17 1.757136345697599E-4 0.0 0.0 0.0022842772494068788 0.0 18 2.4599908839766386E-4 0.0 0.0 0.0027059899723743024 0.0 19 2.4599908839766386E-4 0.0 0.0 0.003408844510653342 0.0 20 2.4599908839766386E-4 0.0 0.0 0.005903978121543933 0.0 21 2.8114181531161585E-4 0.0 0.0 0.010226533531960026 0.0 22 3.162845422255678E-4 0.0 0.0 0.017501078003148086 0.0 23 3.162845422255678E-4 0.0 0.0 0.02164791977899442 0.0 24 3.162845422255678E-4 0.0 0.0 0.02807903880424763 0.0 25 3.162845422255678E-4 0.0 0.0 0.03320987693368462 3.514272691395198E-5 26 3.162845422255678E-4 0.0 0.0 0.04406897955009578 3.514272691395198E-5 27 3.162845422255678E-4 0.0 0.0 0.1047956116574048 3.514272691395198E-5 28 3.162845422255678E-4 0.0 0.0 0.2209423241080161 3.514272691395198E-5 29 3.162845422255678E-4 0.0 0.0 0.3803848761166162 3.514272691395198E-5 30 3.162845422255678E-4 0.0 0.0 0.5972857866295278 3.514272691395198E-5 31 3.162845422255678E-4 0.0 0.0 0.8605399539419422 3.514272691395198E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10685 0.0 22.542818 1 GTATTGG 930 0.0 19.2957 1 TTGGACC 1295 0.0 17.142857 4 ATTGGAC 955 0.0 16.853403 3 ACGTTTA 200 3.6379788E-12 15.725 26 GGACCCT 1385 0.0 15.494585 6 GTATCAA 15925 0.0 15.102041 2 GCGTAAG 75 0.0041063847 14.8 1 TATTGGA 1260 0.0 14.68254 2 TGGACCC 1560 0.0 14.586537 5 GTATTAG 345 0.0 14.47826 1 TAGTACT 440 0.0 13.875 4 GAACGGA 135 6.5746553E-6 13.703704 6 GACCCTC 1510 0.0 13.354305 7 TATACCG 155 1.8901101E-6 13.129032 5 TATTCCG 85 0.00940919 13.058824 5 GTACGTC 85 0.00940919 13.058824 9 TTAATAC 650 0.0 12.807693 3 ACCCTCG 1530 0.0 12.454248 8 TAAACGT 210 2.8958311E-8 12.333334 4 >>END_MODULE