##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088684_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3033853 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.591226404179768 31.0 31.0 34.0 30.0 34.0 2 31.792874275714745 31.0 31.0 34.0 30.0 34.0 3 31.86607162575115 31.0 31.0 34.0 30.0 34.0 4 35.57914737464208 37.0 35.0 37.0 33.0 37.0 5 35.45611669385432 37.0 35.0 37.0 33.0 37.0 6 35.5036315207098 37.0 35.0 37.0 33.0 37.0 7 35.36932672743208 37.0 35.0 37.0 33.0 37.0 8 35.40018913243325 37.0 35.0 37.0 33.0 37.0 9 37.001102558363904 39.0 37.0 39.0 33.0 39.0 10 36.811729177385985 39.0 37.0 39.0 32.0 39.0 11 36.90744014294694 39.0 37.0 39.0 33.0 39.0 12 36.77062929548663 39.0 37.0 39.0 32.0 39.0 13 36.813392408926866 39.0 37.0 39.0 32.0 39.0 14 37.814892151992865 40.0 37.0 41.0 32.0 41.0 15 37.82822305497333 40.0 37.0 41.0 32.0 41.0 16 37.71068967415363 40.0 37.0 41.0 32.0 41.0 17 37.736628966531995 39.0 37.0 41.0 32.0 41.0 18 37.6951055308217 39.0 37.0 41.0 32.0 41.0 19 37.74586606536309 40.0 37.0 41.0 32.0 41.0 20 37.62404935242413 39.0 37.0 41.0 32.0 41.0 21 37.56435661187276 39.0 36.0 41.0 32.0 41.0 22 37.43360044141888 39.0 36.0 41.0 32.0 41.0 23 37.27286556072427 39.0 36.0 41.0 31.0 41.0 24 37.11725749401833 39.0 36.0 41.0 31.0 41.0 25 37.29531622000143 39.0 36.0 41.0 31.0 41.0 26 37.18759049960562 39.0 36.0 41.0 31.0 41.0 27 37.070556813398674 39.0 36.0 41.0 31.0 41.0 28 36.90992674991175 39.0 35.0 41.0 30.0 41.0 29 36.810825376180055 39.0 35.0 41.0 30.0 41.0 30 36.61940344505815 39.0 35.0 40.0 30.0 41.0 31 36.48101539527459 39.0 35.0 40.0 30.0 41.0 32 36.31676683082536 38.0 35.0 40.0 30.0 41.0 33 36.18978539830374 38.0 35.0 40.0 30.0 41.0 34 36.01742141099124 38.0 35.0 40.0 29.0 41.0 35 35.88598030293492 38.0 35.0 40.0 29.0 41.0 36 35.69884697775403 38.0 35.0 40.0 27.0 41.0 37 35.64252420931403 38.0 35.0 40.0 27.0 41.0 38 35.45454377651126 38.0 34.0 40.0 26.0 41.0 39 35.37111850837862 38.0 34.0 40.0 25.0 41.0 40 35.210943641633264 38.0 34.0 40.0 25.0 41.0 41 35.08976011692063 38.0 34.0 40.0 24.0 41.0 42 34.84603538800331 38.0 34.0 40.0 23.0 41.0 43 34.50090627330988 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 2.0 14 8.0 15 10.0 16 47.0 17 102.0 18 201.0 19 466.0 20 1035.0 21 2178.0 22 4125.0 23 7122.0 24 11568.0 25 17641.0 26 25618.0 27 35878.0 28 48786.0 29 63503.0 30 80544.0 31 100607.0 32 124071.0 33 152795.0 34 187101.0 35 232443.0 36 297200.0 37 409144.0 38 562110.0 39 669543.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.04167209156145 21.544484851441386 13.898761739609663 23.515081317387494 2 18.932262044337676 23.32957463660896 35.022296729604236 22.715866589449128 3 19.715325693103786 24.77812867004433 32.443925265990146 23.06262037086174 4 13.867975805024171 16.77579632236631 36.269456694177336 33.08677117843218 5 12.742871853052867 38.526883141668364 35.051698285974965 13.678546719303803 6 32.17528996955357 37.34656886803678 14.023685392799191 16.45445576961046 7 25.888004461653217 32.97344993313783 22.01718408901156 19.121361516197393 8 26.41551848425088 34.958252756478316 19.32519472762853 19.301034031642274 9 24.551222488367102 14.613199782586697 21.92891349712725 38.906664231918946 10 16.23991010770792 27.91035030372269 34.02874166942169 21.820997919147697 11 32.81839957308413 22.82022233773357 23.46287048185921 20.898507607323097 12 20.525780253690602 27.39466941872266 31.247888411205153 20.831661916381577 13 30.83702473389449 21.3582530201694 26.399103713990097 21.40561853194601 14 20.29847853538059 23.26582731595763 27.990347587704477 28.4453465609573 15 22.732907626045165 29.720952201705224 25.566795754441628 21.979344417807983 16 21.6286023086814 28.629468863521073 27.017459316585214 22.72446951121231 17 21.3146451064043 27.39150512566034 27.494179843255424 23.799669924679936 18 22.365454094183203 26.342970473519976 29.551860291187477 21.739715141109343 19 22.43955129005921 25.55443523466694 30.6204025046698 21.385610970604045 20 23.137640485547585 25.316256258955192 30.495017392075358 21.05108586342186 21 22.09180866706462 26.092430978033544 30.89454235257938 20.92121800232246 22 21.054579770344837 26.349628673505276 30.5012470940418 22.094544462108086 23 21.831809253777294 26.478046233617782 31.23203398450749 20.45811052809744 24 21.897962755611427 26.58368747595879 29.203194749383044 22.31515501904674 25 21.795683574649136 26.723114139017284 30.21566964516738 21.265532641166203 26 21.54102390590447 27.3625979900806 30.01572587729201 21.080652226722915 27 20.720351315637245 27.306860286243268 29.885693209262282 22.087095188857205 28 21.0228709169495 27.038323873964888 30.089361613763092 21.849443595322516 29 21.304064501477164 26.918970695020487 29.61676126035111 22.160203543151233 30 21.431559142779825 27.135527001473044 30.719945890588633 20.712967965158498 31 21.90056670511063 26.839731522918214 30.54871148997661 20.710990281994548 32 21.452687391248027 26.849488093193703 29.864993458812933 21.832831056745334 33 21.114371724668267 26.729475686527987 30.41211950611978 21.744033082683966 34 20.617544752497896 26.96989603649221 30.984362129608783 21.42819708140111 35 20.366444913448344 28.504017828154492 29.930883269558546 21.198653988838615 36 22.028127269185422 26.72822315385749 29.827549324242142 21.416100252714948 37 21.196445575972202 27.03911494723047 30.018659440651867 21.745780036145458 38 21.046438307986577 26.0583159434554 30.996129344434287 21.899116404123735 39 20.622159346547114 25.88981733788684 31.68966986864558 21.79835344692047 40 19.862168668027095 26.29395689244007 31.384546317834122 22.45932812169871 41 20.90513284592233 25.394506589475498 31.403729844524435 22.296630720077736 42 19.71150217232015 27.15560048558714 30.796053731014656 22.33684361107806 43 20.17437891684271 26.78719107352927 30.26985816385962 22.768571845768403 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 881.0 1 837.0 2 793.0 3 1524.5 4 2256.0 5 2256.0 6 3507.0 7 4758.0 8 5306.0 9 5854.0 10 9059.0 11 12264.0 12 12264.0 13 23064.5 14 33865.0 15 50372.0 16 66879.0 17 62796.0 18 58713.0 19 58713.0 20 64730.5 21 70748.0 22 58854.5 23 46961.0 24 53031.0 25 59101.0 26 59101.0 27 65385.0 28 71669.0 29 78336.5 30 85004.0 31 94083.5 32 103163.0 33 103163.0 34 114926.5 35 126690.0 36 136798.5 37 146907.0 38 154714.0 39 162521.0 40 162521.0 41 167173.0 42 171825.0 43 180121.0 44 188417.0 45 197247.5 46 206078.0 47 206078.0 48 251852.5 49 297627.0 50 277939.5 51 258252.0 52 234889.5 53 211527.0 54 211527.0 55 190753.5 56 169980.0 57 147001.5 58 124023.0 59 111370.5 60 98718.0 61 98718.0 62 87312.5 63 75907.0 64 66427.0 65 56947.0 66 48481.5 67 40016.0 68 40016.0 69 34012.5 70 28009.0 71 23573.5 72 19138.0 73 15684.0 74 12230.0 75 12230.0 76 9834.5 77 7439.0 78 5748.5 79 4058.0 80 3189.0 81 2320.0 82 2320.0 83 1728.5 84 1137.0 85 862.0 86 587.0 87 444.5 88 302.0 89 302.0 90 238.0 91 174.0 92 124.0 93 74.0 94 49.5 95 25.0 96 25.0 97 17.5 98 10.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3033853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.40775565847599 #Duplication Level Percentage of deduplicated Percentage of total 1 78.74825189810926 39.695226402120106 2 12.064745116637967 12.163134478425562 3 3.9111098190084195 5.91450804330128 4 1.665815666554645 3.358801163669915 5 0.9112981984015599 2.296824845851761 6 0.5451169305119541 1.6486872623127011 7 0.34580769269106076 1.2201972774594645 8 0.2580706107913337 1.0407008233122568 9 0.19915868657238578 0.9035228169003444 >10 1.1466439927273115 11.036195545271827 >50 0.12204921760657089 4.281481583765586 >100 0.07236834231759236 7.069892226332376 >500 0.005502476423893907 1.871603159021786 >1k 0.003406294928994245 3.0960485347130744 >5k 3.9303403026856674E-4 1.2018927574311955 >10k+ 2.6202268684571116E-4 3.2012830801108385 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30855 1.0170235670614232 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30660 1.0105960967785848 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22508 0.7418948775698757 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12927 0.42609183767308434 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7551 0.24889142618314072 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6541 0.2156004262566446 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6345 0.2091399945877404 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5575 0.18375972731704535 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5288 0.17429980951614993 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5099 0.1680701075497066 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3653 0.12040794329850524 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3572 0.11773807102717238 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3531 0.11638665419847302 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3460 0.11404639578779854 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3340 0.11009102945989803 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3210 0.10580604927133912 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.296138606583773E-5 0.0 3 0.0 0.0 0.0 3.296138606583773E-5 0.0 4 0.0 0.0 0.0 3.296138606583773E-5 0.0 5 0.0 0.0 0.0 6.592277213167546E-5 0.0 6 0.0 0.0 0.0 6.592277213167546E-5 0.0 7 0.0 0.0 0.0 6.592277213167546E-5 0.0 8 0.0 0.0 0.0 9.888415819751319E-5 0.0 9 3.296138606583773E-5 0.0 0.0 2.3072970246086413E-4 0.0 10 6.592277213167546E-5 0.0 0.0 2.6369108852670185E-4 0.0 11 6.592277213167546E-5 0.0 0.0 4.6145940492172826E-4 0.0 12 6.592277213167546E-5 0.0 0.0 7.910732655801055E-4 0.0 13 6.592277213167546E-5 0.0 0.0 8.56996037711781E-4 0.0 14 6.592277213167546E-5 0.0 0.0 9.88841581975132E-4 0.0 15 6.592277213167546E-5 0.0 0.0 0.001351416828699347 0.0 16 6.592277213167546E-5 0.0 0.0 0.001845837619686913 0.0 17 6.592277213167546E-5 0.0 0.0 0.0026039494992011808 0.0 18 6.592277213167546E-5 0.0 0.0 0.003164293062320422 0.0 19 6.592277213167546E-5 0.0 0.0 0.003988327713966366 0.0 20 6.592277213167546E-5 0.0 0.0 0.006625238599233384 0.0 21 6.592277213167546E-5 0.0 0.0 0.01133871680664818 3.296138606583773E-5 22 6.592277213167546E-5 0.0 0.0 0.01875502867146167 3.296138606583773E-5 23 6.592277213167546E-5 0.0 0.0 0.023468506878876465 3.296138606583773E-5 24 6.592277213167546E-5 0.0 0.0 0.031016664287953306 3.296138606583773E-5 25 6.592277213167546E-5 0.0 0.0 0.03744413457079166 3.296138606583773E-5 26 6.592277213167546E-5 0.0 0.0 0.049508001870888274 3.296138606583773E-5 27 6.592277213167546E-5 0.0 0.0 0.10775077104922355 3.296138606583773E-5 28 6.592277213167546E-5 0.0 0.0 0.2317515054289051 3.296138606583773E-5 29 6.592277213167546E-5 0.0 0.0 0.3809677001489525 3.296138606583773E-5 30 6.592277213167546E-5 0.0 0.0 0.5915250343375239 3.296138606583773E-5 31 9.888415819751319E-5 0.0 0.0 0.8631927782921586 3.296138606583773E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9875 0.0 22.51848 1 GTATTGG 1095 0.0 17.739725 1 CGCGAAT 70 0.0025938076 15.857142 35 ATTGGAC 1240 0.0 15.217741 3 TGGACCC 1415 0.0 15.0353365 5 ACCGTTA 160 1.0984877E-8 15.03125 8 GTATCAA 14845 0.0 14.966991 2 GGTACGT 100 1.09430264E-4 14.8 8 GGACCCT 1405 0.0 14.747331 6 TTGGACC 1505 0.0 14.504984 4 CGCGCTT 90 8.2795287E-4 14.388888 17 CCCCTAT 355 0.0 14.070422 1 GTATTAG 785 0.0 13.904459 1 CGCGATA 110 2.458442E-4 13.454545 14 CGAATTA 110 2.458442E-4 13.454545 15 ACGTTTA 155 1.8902265E-6 13.129032 26 ACGGTGT 170 3.7370046E-7 13.058824 29 TATTGGA 1420 0.0 13.028169 2 ATACCGT 300 0.0 12.95 6 TGCGCGA 145 1.3736186E-5 12.75862 12 >>END_MODULE