##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088683_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1621228 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56046527693822 31.0 31.0 34.0 30.0 34.0 2 31.763161011282804 31.0 31.0 34.0 30.0 34.0 3 31.82799581551762 31.0 31.0 34.0 30.0 34.0 4 35.55412008674906 37.0 35.0 37.0 33.0 37.0 5 35.43634948323123 37.0 35.0 37.0 33.0 37.0 6 35.484805961900484 37.0 35.0 37.0 33.0 37.0 7 35.34677047275275 37.0 35.0 37.0 33.0 37.0 8 35.381634168667205 37.0 35.0 37.0 33.0 37.0 9 36.975854722469634 39.0 37.0 39.0 33.0 39.0 10 36.79200951377598 39.0 37.0 39.0 32.0 39.0 11 36.8835765234748 39.0 37.0 39.0 33.0 39.0 12 36.7360889399887 39.0 35.0 39.0 32.0 39.0 13 36.7810585556134 39.0 37.0 39.0 32.0 39.0 14 37.744931002918776 40.0 37.0 41.0 32.0 41.0 15 37.7590184724172 40.0 37.0 41.0 32.0 41.0 16 37.63931908405234 39.0 36.0 41.0 32.0 41.0 17 37.677170638553 39.0 37.0 41.0 32.0 41.0 18 37.65309567809093 39.0 37.0 41.0 32.0 41.0 19 37.69785372569435 40.0 37.0 41.0 32.0 41.0 20 37.578956198634614 39.0 37.0 41.0 32.0 41.0 21 37.51820595252487 39.0 36.0 41.0 32.0 41.0 22 37.38444376731712 39.0 36.0 41.0 31.0 41.0 23 37.205036552539184 39.0 36.0 41.0 31.0 41.0 24 37.06196229031327 39.0 36.0 41.0 31.0 41.0 25 37.234312508789635 39.0 36.0 41.0 31.0 41.0 26 37.11083265277925 39.0 36.0 41.0 31.0 41.0 27 37.00815863037155 39.0 36.0 41.0 31.0 41.0 28 36.83924778007782 39.0 35.0 41.0 30.0 41.0 29 36.72511886051807 39.0 35.0 41.0 30.0 41.0 30 36.51759283703464 39.0 35.0 40.0 30.0 41.0 31 36.35645634050238 38.0 35.0 40.0 30.0 41.0 32 36.18504985110052 38.0 35.0 40.0 30.0 41.0 33 36.04525273434705 38.0 35.0 40.0 30.0 41.0 34 35.85930603221755 38.0 35.0 40.0 29.0 41.0 35 35.712635113629915 38.0 35.0 40.0 27.0 41.0 36 35.514597576651774 38.0 34.0 40.0 27.0 41.0 37 35.43667207820245 38.0 34.0 40.0 26.0 41.0 38 35.24306019881226 38.0 34.0 40.0 25.0 41.0 39 35.14736668747394 38.0 34.0 40.0 25.0 41.0 40 34.96906480766432 38.0 34.0 40.0 24.0 41.0 41 34.81969223329476 38.0 33.0 40.0 23.0 41.0 42 34.54466305787958 38.0 33.0 40.0 22.0 41.0 43 34.18989185975076 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 1.0 15 8.0 16 20.0 17 45.0 18 113.0 19 264.0 20 609.0 21 1195.0 22 2249.0 23 3910.0 24 6597.0 25 9841.0 26 14271.0 27 20145.0 28 27129.0 29 35595.0 30 44702.0 31 55266.0 32 68075.0 33 84082.0 34 102061.0 35 126607.0 36 161962.0 37 223794.0 38 297492.0 39 335190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.26995092608813 21.518503258024165 13.974530417683386 23.237015398204324 2 18.95754329434231 23.538700293851328 34.94425213480152 22.559504277004837 3 19.755765382783913 24.61085054045452 32.84929695268031 22.78408712408125 4 13.72200578820499 16.580456296091604 36.375512882827095 33.32202503287631 5 12.57935342838885 38.5047630561525 35.14410064469649 13.771782870762165 6 32.10449116348842 37.245038945786774 13.692151874998457 16.958318015726352 7 25.74702632819073 33.16381162920946 21.78151376610816 19.307648276491644 8 26.692235762027305 34.62875055205067 19.214015548707522 19.464998137214508 9 24.437340090351263 14.47618718650307 21.981053867808846 39.10541885533682 10 16.268285521839 27.82458728815441 33.88536344055247 22.021763749454117 11 32.72587199332852 22.628340985968663 23.654538411623783 20.991248609079044 12 20.7220699371094 27.53727421436097 31.139050152106922 20.601605696422713 13 31.284063685058488 21.11263807434858 26.46543237595206 21.13786586464088 14 20.277407002593094 23.2853738030678 28.133488935547625 28.303730258791482 15 22.68064701571895 29.613786586464087 25.76997189784534 21.935594499971625 16 21.49574273328613 28.573710792066258 27.09316641459437 22.837380060053246 17 21.387183048898738 27.10698310169822 27.394172812213952 24.111661037189094 18 22.6654116509214 25.88790719133891 29.680279393151366 21.766401764588323 19 22.406718857557358 25.051504168445156 31.118880256200853 21.422896717796633 20 23.457650620393924 24.71663455109337 30.777534066769142 21.048180761743566 21 22.17189685843077 25.689785767331923 31.352036851078317 20.786280523158986 22 20.80793077839761 26.028541327931663 30.957706133868896 22.20582175980183 23 21.86089803531644 26.12007687999467 31.75136378103512 20.26766130365377 24 21.88587909905331 26.10188079653201 29.44521066746935 22.567029436945326 25 21.727357287192177 26.37950985302499 30.634309301344416 21.25882355843842 26 21.467615905967573 27.02223252990943 30.434830881282583 21.075320682840413 27 20.42032335982354 27.206167176979424 30.207410678818775 22.16609878437826 28 21.01771003214847 26.728319520758337 30.30579289279484 21.948177554298347 29 21.24827599819396 26.68588255322509 29.711737028968166 22.35410441961279 30 21.349680612474 26.94216976267373 31.15064630021194 20.557503324640333 31 22.043845776164734 26.72548216537094 30.75865948527906 20.472012573185264 32 21.527755503852635 26.52378320631028 30.067578403531147 21.880882886305937 33 21.076862723811825 26.593976911328944 30.665026757494935 21.664133607364295 34 20.528327909461222 27.01285692080324 31.171371330867714 21.28744383886782 35 20.161383839904072 28.937755824597154 30.053144900038735 20.847715435460035 36 22.181642557370093 26.884990883453774 29.813141643248205 21.120224915927928 37 21.270728114737718 27.43247710994382 29.942858129763366 21.3539366455551 38 21.221136077097114 26.228266474548924 30.948638932956996 21.601958515396973 39 20.670133997192252 26.09423227331381 31.618439849299417 21.61719388019452 40 19.733498311156726 26.60384597354598 31.302259768521147 22.360395946776148 41 21.189184988169462 25.63057139402971 31.28992344074985 21.890320177050977 42 19.91990022378099 27.478121522697606 30.66157258571897 21.94040566780243 43 20.349081066944315 27.206413903534855 29.925278862689268 22.51922616683156 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 580.0 1 526.0 2 472.0 3 813.0 4 1154.0 5 1154.0 6 1901.5 7 2649.0 8 2899.5 9 3150.0 10 4876.5 11 6603.0 12 6603.0 13 12731.5 14 18860.0 15 29329.0 16 39798.0 17 36869.0 18 33940.0 19 33940.0 20 37068.5 21 40197.0 22 32826.5 23 25456.0 24 28426.0 25 31396.0 26 31396.0 27 34666.0 28 37936.0 29 40778.0 30 43620.0 31 48123.0 32 52626.0 33 52626.0 34 58345.0 35 64064.0 36 69824.5 37 75585.0 38 79158.5 39 82732.0 40 82732.0 41 85231.0 42 87730.0 43 91663.5 44 95597.0 45 101318.0 46 107039.0 47 107039.0 48 136734.0 49 166429.0 50 155186.5 51 143944.0 52 130909.0 53 117874.0 54 117874.0 55 104959.0 56 92044.0 57 79211.0 58 66378.0 59 58987.0 60 51596.0 61 51596.0 62 45778.0 63 39960.0 64 34952.5 65 29945.0 66 25625.0 67 21305.0 68 21305.0 69 18173.0 70 15041.0 71 12736.0 72 10431.0 73 8402.0 74 6373.0 75 6373.0 76 5192.5 77 4012.0 78 3111.5 79 2211.0 80 1705.5 81 1200.0 82 1200.0 83 924.0 84 648.0 85 495.0 86 342.0 87 247.5 88 153.0 89 153.0 90 130.0 91 107.0 92 71.0 93 35.0 94 23.0 95 11.0 96 11.0 97 7.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1621228.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.730553709593146 #Duplication Level Percentage of deduplicated Percentage of total 1 82.57555968109112 45.19406104225672 2 10.304476751877784 11.279394366358018 3 2.9601402653549895 4.860303473428218 4 1.2068640938697466 2.6420936043887044 5 0.6543288155278111 1.7905889190989663 6 0.3995724609677817 1.312129322152289 7 0.2928616998697358 1.1219938095942328 8 0.20578106042920485 0.90100091041901 9 0.15790507917499086 0.7778009175123956 >10 1.0865113101467128 11.317203738734399 >50 0.08999086208701733 3.423285769926111 >100 0.05685288638680938 5.7402438853967315 >500 0.0054252048688782925 2.151836352153403 >1k 0.0031647028401790038 3.491027555159469 >5k 2.2605020286992888E-4 0.7942729477850198 >10k+ 3.390753043048933E-4 3.202763385636246 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19394 1.1962537039824135 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18442 1.137532783791052 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13939 0.85978036402036 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7636 0.47100099430801834 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5204 0.32099124860907907 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4457 0.2749150643832946 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4344 0.26794503919251333 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4112 0.2536348989778119 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3681 0.22705011263067254 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3392 0.2092241190011522 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2323 0.1432864470635839 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2237 0.13798182612192733 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2231 0.1376117362887885 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2188 0.13495942581796022 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2117 0.13058002945915073 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2017 0.12441186557350355 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1980 0.12212964493581409 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1894 0.1168250239941575 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1798 0.11090358666393622 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.168163885647176E-5 0.0 8 0.0 0.0 0.0 6.168163885647176E-5 0.0 9 0.0 0.0 0.0 6.168163885647176E-5 0.0 10 6.168163885647176E-5 0.0 0.0 6.168163885647176E-5 0.0 11 6.168163885647176E-5 0.0 0.0 1.850449165694153E-4 0.0 12 6.168163885647176E-5 0.0 0.0 3.700898331388306E-4 0.0 13 1.2336327771294352E-4 0.0 0.0 3.700898331388306E-4 0.0 14 1.2336327771294352E-4 0.0 0.0 6.784980274211894E-4 0.0 15 1.850449165694153E-4 0.0 0.0 0.0010485878605600199 0.0 16 1.850449165694153E-4 0.0 0.0 0.0018504491656941527 0.0 17 1.850449165694153E-4 0.0 0.0 0.0028990370262541726 0.0 18 1.850449165694153E-4 0.0 0.0 0.0032074452205365315 0.0 19 1.850449165694153E-4 0.0 0.0 0.0041943514422400794 0.0 20 1.850449165694153E-4 0.0 0.0 0.0065999353576424785 0.0 21 1.850449165694153E-4 0.0 0.0 0.010424196966743727 0.0 22 1.850449165694153E-4 0.0 0.0 0.01714749560209915 0.0 23 1.850449165694153E-4 0.0 0.0 0.021650255238621588 0.0 24 1.850449165694153E-4 0.0 0.0 0.02800346404083818 0.0 25 1.850449165694153E-4 0.0 0.0 0.03275295023278651 0.0 26 1.850449165694153E-4 0.0 0.0 0.041943514422400796 0.0 27 1.850449165694153E-4 0.0 0.0 0.09264582156242059 0.0 28 1.850449165694153E-4 0.0 0.0 0.19713451778528374 0.0 29 1.850449165694153E-4 0.0 0.0 0.3228416977747732 0.0 30 1.850449165694153E-4 0.0 0.0 0.5043090792905132 0.0 31 1.850449165694153E-4 0.0 0.0 0.7214284480652937 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5890 0.0 22.771648 1 ACGTTTA 65 6.904366E-5 19.923077 26 GTACCGT 60 9.239047E-4 18.5 6 GTATTGG 585 0.0 18.34188 1 GTATTAG 345 0.0 17.695652 1 GGACCCT 780 0.0 17.551283 6 TAGGTCG 95 3.6082365E-6 17.526316 21 TTGGACC 815 0.0 17.478527 4 ATTGGAC 695 0.0 16.503597 3 TGGACCC 855 0.0 16.22807 5 GTATCAA 8700 0.0 15.437931 2 TAATACT 440 0.0 15.136364 4 ACGGGTA 90 8.276599E-4 14.388888 17 TAGTACT 270 0.0 14.388888 4 GTATAGA 155 1.2109376E-7 14.32258 1 GAACTAT 105 1.656293E-4 14.095238 1 TATTGGA 815 0.0 13.846625 2 TAGGACC 295 0.0 13.79661 4 GACCCTC 940 0.0 13.776596 7 GATACTG 580 0.0 13.715517 36 >>END_MODULE