##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088682_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1574132 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.617699151024183 31.0 31.0 34.0 30.0 34.0 2 31.832801188210393 31.0 31.0 34.0 30.0 34.0 3 31.922125971646597 31.0 31.0 34.0 30.0 34.0 4 35.63604068782033 37.0 35.0 37.0 33.0 37.0 5 35.4967823537035 37.0 35.0 37.0 33.0 37.0 6 35.537910416661376 37.0 35.0 37.0 33.0 37.0 7 35.411846020537034 37.0 35.0 37.0 33.0 37.0 8 35.424031148594906 37.0 35.0 37.0 33.0 37.0 9 37.04225503325007 39.0 37.0 39.0 33.0 39.0 10 36.84624478760358 39.0 37.0 39.0 32.0 39.0 11 36.93839144366546 39.0 37.0 39.0 33.0 39.0 12 36.79398805182793 39.0 37.0 39.0 32.0 39.0 13 36.83288949084321 39.0 37.0 39.0 32.0 39.0 14 37.860805828227875 40.0 37.0 41.0 32.0 41.0 15 37.864113047698666 40.0 37.0 41.0 33.0 41.0 16 37.764442880266714 40.0 37.0 41.0 32.0 41.0 17 37.752844107101566 40.0 37.0 41.0 32.0 41.0 18 37.7099328391774 39.0 37.0 41.0 32.0 41.0 19 37.74792329995197 40.0 37.0 41.0 32.0 41.0 20 37.62076306180168 39.0 37.0 41.0 32.0 41.0 21 37.55734716021274 39.0 36.0 41.0 32.0 41.0 22 37.41966048590589 39.0 36.0 41.0 32.0 41.0 23 37.25419215161117 39.0 36.0 41.0 31.0 41.0 24 37.10502422922601 39.0 36.0 41.0 31.0 41.0 25 37.29796357611687 39.0 36.0 41.0 31.0 41.0 26 37.19477146770411 39.0 36.0 41.0 31.0 41.0 27 37.09543418213975 39.0 36.0 41.0 31.0 41.0 28 36.93809731331299 39.0 36.0 41.0 30.0 41.0 29 36.849895053273805 39.0 36.0 41.0 30.0 41.0 30 36.68083362767544 39.0 35.0 40.0 30.0 41.0 31 36.58000282060208 39.0 35.0 40.0 30.0 41.0 32 36.40975216817903 39.0 35.0 40.0 30.0 41.0 33 36.29612827894992 38.0 35.0 40.0 30.0 41.0 34 36.13655589239022 38.0 35.0 40.0 29.0 41.0 35 36.01911402601561 38.0 35.0 40.0 29.0 41.0 36 35.84289754607619 38.0 35.0 40.0 28.0 41.0 37 35.80836295812549 38.0 35.0 40.0 27.0 41.0 38 35.65147331989947 38.0 35.0 40.0 27.0 41.0 39 35.591397671859795 38.0 35.0 40.0 26.0 41.0 40 35.46365933733639 38.0 34.0 40.0 26.0 41.0 41 35.362172295588934 38.0 34.0 40.0 25.0 41.0 42 35.160618677467966 38.0 34.0 40.0 24.0 41.0 43 34.82607875324306 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 2.0 15 11.0 16 20.0 17 48.0 18 108.0 19 281.0 20 522.0 21 1122.0 22 1895.0 23 3403.0 24 5415.0 25 8558.0 26 12511.0 27 17375.0 28 23781.0 29 31525.0 30 40513.0 31 50340.0 32 62742.0 33 77694.0 34 97227.0 35 120000.0 36 155654.0 37 212424.0 38 301235.0 39 349723.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.33344598801117 21.015200758259155 13.295898946212898 24.355454307516776 2 18.818243959210537 22.794657627187558 34.89777223257008 23.489326181031835 3 19.449258384938492 24.517003656618378 31.98213364571713 24.051604312725996 4 13.883714961642351 16.46831396604605 36.66007679152701 32.98789428078459 5 12.973308464601443 38.11560911029062 35.33464792025065 13.576434504857279 6 32.53691558268303 37.53008006952403 14.362073828624283 15.57093051916866 7 26.724378895797813 32.35224237865694 22.07318064812862 18.850198077416632 8 26.613270043427107 34.664881979401976 19.50198585633225 19.21986212083866 9 24.987231058132355 14.370141767018268 21.393377429592945 39.249249745256435 10 16.00837795051495 27.519039064068323 34.46839273961777 22.004190245798956 11 33.50722811047612 22.543280995494662 23.360620329171887 20.58887056485733 12 20.78967964567139 26.760779909181696 31.138430576343023 21.311109868803886 13 30.572467874358694 21.169317439706454 25.89141190192436 22.36680278401049 14 20.681365984555296 22.617671199111637 27.371275090017868 29.3296877263152 15 23.20955294727507 29.474974144480893 24.743477675315667 22.57199523292837 16 22.304546251521472 28.31585915285376 26.144503764614402 23.23509083101036 17 21.82694970942716 27.225607509408363 26.98344230344088 23.964000477723594 18 22.631138938792937 26.535894067333615 28.711950459046637 22.12101653482681 19 22.852086102054976 25.703117654682075 29.530433280055295 21.914362963207658 20 23.53900435287511 25.45237629372886 29.31704583859549 21.691573514800538 21 22.598994239364934 26.164070103396664 29.505530667059688 21.731404990178717 22 21.83177776704876 26.34073889610274 29.20091834738129 22.62656498946721 23 22.458472351746867 26.474717495102063 29.61625835698658 21.45055179616449 24 22.564689619422005 26.61657345127346 27.960869863518433 22.857867065786095 25 22.534323678065117 26.565243575507008 28.918222868221978 21.982209878205893 26 22.24540254565691 27.18348905936732 28.800443673084597 21.770664721891176 27 21.58522919297746 27.200895477634656 28.4948149202227 22.719060409165177 28 21.769775342855617 26.85848454894507 28.875469147441258 22.496270960758054 29 22.23314182038101 26.659390699128156 28.49233736433793 22.6151301161529 30 22.149222555668775 26.969593401315773 29.335214581750453 21.545969461265003 31 22.616527711780208 26.73428911933688 29.243417959866136 21.405765209016778 32 22.002602068949745 26.628453014105553 28.696576907146287 22.672368009798415 33 21.816785377592222 26.685309745307258 29.167312525252008 22.33059235184851 34 21.61559513433435 26.677940604726924 29.54237636996135 22.164087890977378 35 21.355070603990008 28.03856347498177 28.84631022048977 21.760055700538455 36 22.75832014087764 26.64103137475129 28.64003781131443 21.960610673056642 37 21.998726917437676 26.7201861089159 28.88601464172001 22.39507233192642 38 21.85572747393484 26.079007351353 29.656915684326346 22.408349490385813 39 21.362249163348434 25.885440356971333 30.301969593401317 22.450340886278912 40 20.731806481286196 26.180587142628447 30.221417263609407 22.866189112475954 41 21.561978283905034 25.386054028505868 30.224466563159886 22.827501124429208 42 20.618220073030724 26.61905100715823 29.854167248998177 22.908561670812865 43 20.882619754887138 26.23655449479459 29.661171998282228 23.21965375203604 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 368.0 1 377.5 2 387.0 3 708.5 4 1030.0 5 1030.0 6 1509.5 7 1989.0 8 2165.0 9 2341.0 10 3650.0 11 4959.0 12 4959.0 13 8814.0 14 12669.0 15 19350.0 16 26031.0 17 24609.5 18 23188.0 19 23188.0 20 25973.5 21 28759.0 22 24875.0 23 20991.0 24 24066.0 25 27141.0 26 27141.0 27 30980.5 28 34820.0 29 38635.5 30 42451.0 31 47758.0 32 53065.0 33 53065.0 34 59818.0 35 66571.0 36 73085.5 37 79600.0 38 83362.5 39 87125.0 40 87125.0 41 90101.5 42 93078.0 43 97309.0 44 101540.0 45 104815.5 46 108091.0 47 108091.0 48 126833.5 49 145576.0 50 138719.5 51 131863.0 52 122071.0 53 112279.0 54 112279.0 55 103410.5 56 94542.0 57 82956.0 58 71370.0 59 64488.5 60 57607.0 61 57607.0 62 51125.5 63 44644.0 64 38936.5 65 33229.0 66 28279.0 67 23329.0 68 23329.0 69 19755.5 70 16182.0 71 13663.0 72 11144.0 73 9024.0 74 6904.0 75 6904.0 76 5500.5 77 4097.0 78 3215.0 79 2333.0 80 1848.5 81 1364.0 82 1364.0 83 1029.0 84 694.0 85 541.0 86 388.0 87 288.5 88 189.0 89 189.0 90 152.0 91 115.0 92 81.0 93 47.0 94 40.0 95 33.0 96 33.0 97 20.5 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1574132.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.02742331194047 #Duplication Level Percentage of deduplicated Percentage of total 1 83.87398006660096 50.34738906315111 2 9.64192286524576 11.575595707463702 3 2.6238688852772234 4.725122648746956 4 1.135045951576342 2.7253553525510945 5 0.618603568901345 1.8566589146359083 6 0.40657777424317876 1.4643489698233112 7 0.25680187346339817 1.079060833598074 8 0.2021394442542379 0.9707127990631624 9 0.16434056468562058 0.8878446579336372 >10 0.9523511803866921 10.758178259106389 >50 0.07354357334461067 3.0579551354447445 >100 0.04521257801113044 5.084695419573998 >500 0.003599941817434696 1.4248302638033294 >1k 0.0016940902670280922 2.0002155960457926 >5k 1.0588064168925576E-4 0.555809646576863 >10k+ 2.1176128337851153E-4 1.4862267324818028 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12007 0.7627695771383849 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11377 0.7227475205383029 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8745 0.5555442618535167 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4746 0.30149949305394974 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3170 0.2013808244797768 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2642 0.1678385294244701 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2543 0.16154934910160013 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2347 0.1490980426037969 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2216 0.1407759959139386 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2099 0.13334332825963768 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 6.352707396838384E-5 0.0 2 0.0 6.352707396838384E-5 0.0 6.352707396838384E-5 0.0 3 0.0 6.352707396838384E-5 0.0 6.352707396838384E-5 0.0 4 0.0 6.352707396838384E-5 0.0 1.270541479367677E-4 0.0 5 0.0 6.352707396838384E-5 0.0 1.9058122190515153E-4 0.0 6 0.0 6.352707396838384E-5 0.0 1.9058122190515153E-4 0.0 7 0.0 6.352707396838384E-5 0.0 1.9058122190515153E-4 0.0 8 0.0 6.352707396838384E-5 0.0 1.9058122190515153E-4 0.0 9 0.0 6.352707396838384E-5 0.0 3.8116244381030306E-4 0.0 10 0.0 1.270541479367677E-4 0.0 3.8116244381030306E-4 0.0 11 0.0 1.270541479367677E-4 0.0 4.446895177786869E-4 0.0 12 0.0 1.270541479367677E-4 0.0 6.352707396838384E-4 0.0 13 6.352707396838384E-5 1.270541479367677E-4 0.0 6.352707396838384E-4 0.0 14 6.352707396838384E-5 1.270541479367677E-4 0.0 8.2585196158899E-4 0.0 15 6.352707396838384E-5 1.270541479367677E-4 0.0 0.0010799602574625253 0.0 16 6.352707396838384E-5 1.270541479367677E-4 0.0 0.0013340685533360607 0.0 17 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.0018422851450831316 0.0 18 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.0025410829587353538 0.0 19 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.00330340784635596 0.0 20 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.0046374763996920206 0.0 21 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.007686775950174445 0.0 22 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.011752508684151012 0.0 23 6.352707396838384E-5 1.9058122190515153E-4 0.0 0.013975956273044446 0.0 24 6.352707396838384E-5 2.541082958735354E-4 0.0 0.018041689007021012 0.0 25 6.352707396838384E-5 2.541082958735354E-4 0.0 0.02293327370258657 0.0 26 6.352707396838384E-5 3.176353698419192E-4 0.0 0.030683576726729396 0.0 27 6.352707396838384E-5 3.176353698419192E-4 0.0 0.07966295075635334 0.0 28 6.352707396838384E-5 3.176353698419192E-4 0.0 0.17508061585686588 0.0 29 6.352707396838384E-5 3.176353698419192E-4 0.0 0.2948291502872694 0.0 30 6.352707396838384E-5 3.176353698419192E-4 0.0 0.4530750915425136 0.0 31 6.352707396838384E-5 3.176353698419192E-4 0.0 0.6550911867619742 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3815 0.0 22.25819 1 GTATTGG 515 0.0 19.398058 1 TACCCCG 155 1.8189894E-12 19.096775 5 TTAACGG 180 0.0 18.5 35 GTACGAC 50 0.007036009 18.5 3 TAGGACG 65 0.0015802848 17.076923 4 CTAATAC 430 0.0 16.348837 3 TAACGGC 200 3.6379788E-12 15.725 36 AGTACCG 155 7.214112E-9 15.5161295 5 ATTGGAC 505 0.0 15.019802 3 CTCTAAT 345 0.0 15.014493 1 GGACCCT 595 0.0 14.924371 6 GTATCAA 5690 0.0 14.891037 2 AATGCGA 100 1.0937714E-4 14.8 20 TGGACCC 630 0.0 14.682539 5 ATAGTAC 215 1.2732926E-11 14.627907 3 CGGTTGG 205 9.276846E-11 14.439025 33 CAATGCG 90 8.276411E-4 14.388888 19 TACTCCG 245 0.0 14.346938 5 GGTTAGA 155 1.2108649E-7 14.322581 1 >>END_MODULE